RNA–Protein interactions for RNA: YLR417W

VPS36, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS36, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS36YLR417W RPL20BP0CX24 172 aaPredicted RBP4.55□□□□□ -1.68
VPS36YLR417W RPL12AP0CX53 165 aaKnown RBP4.55□□□□□ -1.68
VPS36YLR417W RPL12BP0CX54 165 aa4.55□□□□□ -1.68
VPS36YLR417W SKN1P33336 771 aa4.55□□□□□ -1.68
VPS36YLR417W SPP381P38282 291 aaPredicted RBP4.55□□□□□ -1.68
VPS36YLR417W MSG5P38590 489 aa4.55□□□□□ -1.68
VPS36YLR417W RRF1P38771 230 aa4.55□□□□□ -1.68
VPS36YLR417W DHH1P39517 506 aaKnown RBP4.55□□□□□ -1.68
VPS36YLR417W PES4P39684 611 aa4.55□□□□□ -1.68
VPS36YLR417W MMF1P40185 145 aaKnown RBP4.55□□□□□ -1.68
VPS36YLR417W YJL070CP40361 888 aa4.55□□□□□ -1.68
VPS36YLR417W CAF40P53829 373 aa4.55□□□□□ -1.68
VPS36YLR417W PRM1P53835 661 aa4.55□□□□□ -1.68
VPS36YLR417W MPS1P54199 764 aa4.55□□□□□ -1.68
VPS36YLR417W SPH1Q06160 661 aa4.55□□□□□ -1.68
VPS36YLR417W ECM7Q06200 448 aa4.55□□□□□ -1.68
VPS36YLR417W YAP7Q08182 245 aa4.55□□□□□ -1.68
VPS36YLR417W AYT1Q12226 474 aa4.55□□□□□ -1.68
VPS36YLR417W SAM1P10659 382 aaKnown RBP4.55□□□□□ -1.68
VPS36YLR417W SAM2P19358 384 aaKnown RBP4.55□□□□□ -1.68
VPS36YLR417W PUT3P25502 979 aaPredicted RBP4.55□□□□□ -1.68
VPS36YLR417W SRB2P34162 210 aa4.55□□□□□ -1.68
VPS36YLR417W PRO2P54885 456 aaKnown RBP4.55□□□□□ -1.68
VPS36YLR417W NOP6Q07623 225 aaKnown RBP4.55□□□□□ -1.68
VPS36YLR417W DAP1Q12091 152 aa4.55□□□□□ -1.68
VPS36YLR417W RTC5Q12108 567 aaKnown RBP4.55□□□□□ -1.68
VPS36YLR417W PEP1P32319 1579 aa4.54□□□□□ -1.68
VPS36YLR417W STE3P06783 470 aa4.54□□□□□ -1.68
VPS36YLR417W SLM5P25345 492 aaKnown RBP4.54□□□□□ -1.68
VPS36YLR417W PSO2P30620 661 aa4.54□□□□□ -1.68
VPS36YLR417W RPR2P40571 144 aa4.54□□□□□ -1.68
VPS36YLR417W YFR016CP43597 1233 aaKnown RBP4.54□□□□□ -1.68
VPS36YLR417W YMR181CQ03231 154 aa4.54□□□□□ -1.68
VPS36YLR417W RAD61Q99359 647 aa4.54□□□□□ -1.68
VPS36YLR417W TOP2P06786 1428 aaKnown RBP4.54□□□□□ -1.68
VPS36YLR417W SUR1P33300 382 aa4.53□□□□□ -1.68
VPS36YLR417W KKQ8P36004 724 aa4.53□□□□□ -1.68
VPS36YLR417W ATP3P38077 311 aaKnown RBP4.53□□□□□ -1.68
VPS36YLR417W OPY1P38271 328 aa4.53□□□□□ -1.68
VPS36YLR417W RPH1P39956 796 aa4.53□□□□□ -1.68
VPS36YLR417W STE24P47154 453 aa4.53□□□□□ -1.68
VPS36YLR417W GPI8P49018 411 aa4.53□□□□□ -1.68
VPS36YLR417W MPS2P53159 387 aa4.53□□□□□ -1.68
VPS36YLR417W TPT1Q12272 230 aaKnown RBP4.53□□□□□ -1.68
VPS36YLR417W SET6Q12529 373 aa4.53□□□□□ -1.68
VPS36YLR417W OPI3P05375 206 aa4.52□□□□□ -1.69
VPS36YLR417W ARF1P11076 181 aaKnown RBP4.52□□□□□ -1.69
VPS36YLR417W THR4P16120 514 aaKnown RBP4.52□□□□□ -1.69
VPS36YLR417W ATS1P31386 333 aa4.52□□□□□ -1.69
VPS36YLR417W SPT10P35208 640 aa4.52□□□□□ -1.69
VPS36YLR417W YHR177WP38867 453 aa4.52□□□□□ -1.69
VPS36YLR417W MKT1P40850 830 aaKnown RBP4.52□□□□□ -1.69
VPS36YLR417W PMT5P52867 743 aa4.52□□□□□ -1.69
VPS36YLR417W HST1P53685 503 aa4.52□□□□□ -1.69
VPS36YLR417W YML122CQ03207 126 aa4.52□□□□□ -1.69
VPS36YLR417W RKR1Q04781 1562 aa4.52□□□□□ -1.69
VPS36YLR417W PEX27Q08580 376 aa4.52□□□□□ -1.69
VPS36YLR417W SAG1P20840 650 aa4.52□□□□□ -1.69
VPS36YLR417W LOS1P33418 1100 aaPredicted RBP4.52□□□□□ -1.69
VPS36YLR417W DOA1P36037 715 aa4.52□□□□□ -1.69
VPS36YLR417W FAA2P39518 744 aa4.52□□□□□ -1.69
VPS36YLR417W COS10P52924 374 aa4.52□□□□□ -1.69
VPS36YLR417W LSC1P53598 329 aaKnown RBP4.52□□□□□ -1.69
VPS36YLR417W SMA2Q04658 369 aa4.52□□□□□ -1.69
VPS36YLR417W GRS2Q06817 618 aa4.52□□□□□ -1.69
VPS36YLR417W AFT2Q08957 416 aa4.52□□□□□ -1.69
VPS36YLR417W CEX1Q12453 761 aa4.52□□□□□ -1.69
VPS36YLR417W RRP12Q12754 1228 aaKnown RBP4.52□□□□□ -1.69
VPS36YLR417W HEM2P05373 342 aa4.51□□□□□ -1.69
VPS36YLR417W ATP1P07251 545 aaKnown RBP4.51□□□□□ -1.69
VPS36YLR417W RNA14P25298 677 aaKnown RBP4.51□□□□□ -1.69
VPS36YLR417W SPS22P25380 463 aa4.51□□□□□ -1.69
VPS36YLR417W COX13P32799 129 aa4.51□□□□□ -1.69
VPS36YLR417W RIB5P38145 238 aa4.51□□□□□ -1.69
VPS36YLR417W MIX23P38162 196 aa4.51□□□□□ -1.69
VPS36YLR417W ATM1P40416 690 aa4.51□□□□□ -1.69
VPS36YLR417W TOS3P43637 560 aa4.51□□□□□ -1.69
VPS36YLR417W AZR1P50080 613 aa4.51□□□□□ -1.69
VPS36YLR417W IBD2P53892 351 aa4.51□□□□□ -1.69
VPS36YLR417W SLY1P22213 666 aa4.5□□□□□ -1.69
VPS36YLR417W YDR089WP38966 869 aa4.5□□□□□ -1.69
VPS36YLR417W OSW5P40219 148 aa4.5□□□□□ -1.69
VPS36YLR417W SIM1P40472 476 aa4.5□□□□□ -1.69
VPS36YLR417W SFH5P47008 294 aa4.5□□□□□ -1.69
VPS36YLR417W LDS2Q08218 356 aa4.5□□□□□ -1.69
VPS36YLR417W NCA2Q12374 616 aa4.5□□□□□ -1.69
VPS36YLR417W RPO31P04051 1460 aa4.5□□□□□ -1.69
VPS36YLR417W SKT5P34226 696 aa4.49□□□□□ -1.69
VPS36YLR417W YPT53P36019 220 aa4.49□□□□□ -1.69
VPS36YLR417W NAT2P37293 288 aa4.49□□□□□ -1.69
VPS36YLR417W MDM31P38880 579 aa4.49□□□□□ -1.69
VPS36YLR417W BCH1Q05029 724 aa4.49□□□□□ -1.69
VPS36YLR417W NUP159P40477 1460 aa4.49□□□□□ -1.69
VPS36YLR417W MLP2P40457 1679 aa4.49□□□□□ -1.69
VPS36YLR417W MCK1P21965 375 aaKnown RBP4.49□□□□□ -1.69
VPS36YLR417W YBP1P38315 674 aa4.49□□□□□ -1.69
VPS36YLR417W YGR117CP53270 476 aa4.49□□□□□ -1.69
VPS36YLR417W RET3P53600 189 aa4.49□□□□□ -1.69
VPS36YLR417W YMR310CQ04867 317 aaPredicted RBP4.49□□□□□ -1.69
VPS36YLR417W MDY2Q12285 212 aa4.49□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 42.1 ms