RNA–Protein interactions for RNA: YKL068W

NUP100, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP100, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP100YKL068W CDD1Q06549 142 aa2.19□□□□□ -2.06
NUP100YKL068W PEX27Q08580 376 aa2.19□□□□□ -2.06
NUP100YKL068W RDR1Q08904 546 aa2.19□□□□□ -2.06
NUP100YKL068W GRE1Q08969 168 aa2.19□□□□□ -2.06
NUP100YKL068W SRN2Q99176 213 aa2.19□□□□□ -2.06
NUP100YKL068W ACC1Q00955 2233 aaKnown RBP2.19□□□□□ -2.06
NUP100YKL068W GLT1Q12680 2145 aaKnown RBP2.19□□□□□ -2.06
NUP100YKL068W TDH3P00359 332 aaKnown RBP RIP-Chip data2.19□□□□□ -2.06not detected
NUP100YKL068W COR1P07256 457 aa2.19□□□□□ -2.06
NUP100YKL068W RPL18AP0CX49 186 aaKnown RBP2.19□□□□□ -2.06
NUP100YKL068W RPL18BP0CX50 186 aaKnown RBP2.19□□□□□ -2.06
NUP100YKL068W PCT1P13259 424 aa2.19□□□□□ -2.06
NUP100YKL068W CDC23P16522 626 aa2.19□□□□□ -2.06
NUP100YKL068W GPI12P23797 304 aa2.19□□□□□ -2.06
NUP100YKL068W CNE1P27825 502 aa2.19□□□□□ -2.06
NUP100YKL068W CIN8P27895 1000 aa2.19□□□□□ -2.06
NUP100YKL068W MSS51P32335 436 aa2.19□□□□□ -2.06
NUP100YKL068W NRP1P32770 719 aaKnown RBP RIP-Chip data2.19□□□□□ -2.06not detected
NUP100YKL068W PTR2P32901 601 aa2.19□□□□□ -2.06
NUP100YKL068W GDH2P33327 1092 aaKnown RBP2.19□□□□□ -2.06
NUP100YKL068W SOF1P33750 489 aaKnown RBP2.19□□□□□ -2.06
NUP100YKL068W AAP1P37898 856 aaKnown RBP2.19□□□□□ -2.06
NUP100YKL068W QDR3P38227 689 aa2.19□□□□□ -2.06
NUP100YKL068W VHC1P38329 1120 aa2.19□□□□□ -2.06
NUP100YKL068W FKS1P38631 1876 aaKnown RBP2.19□□□□□ -2.06
NUP100YKL068W YEL020CP39994 560 aa2.19□□□□□ -2.06
NUP100YKL068W VAB2P40003 282 aa2.19□□□□□ -2.06
NUP100YKL068W DSE1P40077 573 aa2.19□□□□□ -2.06
NUP100YKL068W PIG2P40187 538 aa2.19□□□□□ -2.06
NUP100YKL068W HAM1P47119 197 aaKnown RBP2.19□□□□□ -2.06
NUP100YKL068W YGR127WP53275 312 aa2.19□□□□□ -2.06
NUP100YKL068W YNL260CP53846 198 aa2.19□□□□□ -2.06
NUP100YKL068W MSC1Q03104 513 aa2.19□□□□□ -2.06
NUP100YKL068W PIG1Q06216 648 aa2.19□□□□□ -2.06
NUP100YKL068W POS5Q06892 414 aa2.19□□□□□ -2.06
NUP100YKL068W NOP12Q08208 459 aaKnown RBP2.19□□□□□ -2.06
NUP100YKL068W YPL216WQ08964 1102 aa2.19□□□□□ -2.06
NUP100YKL068W YDR524C-BQ3E6R4 66 aa2.19□□□□□ -2.06
NUP100YKL068W TDH2P00358 332 aaKnown RBP2.18□□□□□ -2.06
NUP100YKL068W GAL4P04386 881 aa2.18□□□□□ -2.06
NUP100YKL068W THR4P16120 514 aaKnown RBP2.18□□□□□ -2.06
NUP100YKL068W MSB1P21339 1137 aaKnown RBP2.18□□□□□ -2.06
NUP100YKL068W MBR1P23493 339 aa2.18□□□□□ -2.06
NUP100YKL068W CDC5P32562 705 aa2.18□□□□□ -2.06
NUP100YKL068W RPC25P35718 212 aa2.18□□□□□ -2.06
NUP100YKL068W RPL32P38061 130 aaKnown RBP2.18□□□□□ -2.06
NUP100YKL068W MAK5P38112 773 aaPredicted RBP2.18□□□□□ -2.06
NUP100YKL068W DUG2P38149 878 aa2.18□□□□□ -2.06
NUP100YKL068W RTC2P38279 296 aa2.18□□□□□ -2.06
NUP100YKL068W UBA4P38820 440 aa2.18□□□□□ -2.06
NUP100YKL068W ANS1P38832 159 aa2.18□□□□□ -2.06
NUP100YKL068W RIX1P38883 763 aaPredicted RBP2.18□□□□□ -2.06
NUP100YKL068W PET100P38958 111 aa2.18□□□□□ -2.06
NUP100YKL068W MBB1P39534 108 aa2.18□□□□□ -2.06
NUP100YKL068W SNL1P40548 159 aa2.18□□□□□ -2.06
NUP100YKL068W HXT9P40885 567 aa2.18□□□□□ -2.06
NUP100YKL068W ATG27P46989 271 aa2.18□□□□□ -2.06
NUP100YKL068W HXT11P54862 567 aa2.18□□□□□ -2.06
NUP100YKL068W GIM5Q04493 163 aa2.18□□□□□ -2.06
NUP100YKL068W MDM30Q05930 598 aa2.18□□□□□ -2.06
NUP100YKL068W YDL057WQ07379 328 aa2.18□□□□□ -2.06
NUP100YKL068W YDL242WQ07746 117 aa2.18□□□□□ -2.06
NUP100YKL068W IZH3Q07959 543 aa2.18□□□□□ -2.06
NUP100YKL068W VIK1Q12045 647 aa2.18□□□□□ -2.06
NUP100YKL068W TIP41Q12199 356 aa2.18□□□□□ -2.06
NUP100YKL068W YDL177CQ12257 170 aa2.18□□□□□ -2.06
NUP100YKL068W RHO1P06780 209 aaKnown RBP2.18□□□□□ -2.06
NUP100YKL068W YLL053CP0CD98 152 aa2.18□□□□□ -2.06
NUP100YKL068W MATALPHA2P0CY08 210 aa2.18□□□□□ -2.06
NUP100YKL068W HMLALPHA2P0CY09 210 aa2.18□□□□□ -2.06
NUP100YKL068W ABF1P14164 731 aa2.18□□□□□ -2.06
NUP100YKL068W COQ1P18900 473 aa2.18□□□□□ -2.06
NUP100YKL068W YCL042WP25572 119 aa2.18□□□□□ -2.06
NUP100YKL068W PPA2P28239 310 aa2.18□□□□□ -2.06
NUP100YKL068W TRM2P33753 639 aa2.18□□□□□ -2.06
NUP100YKL068W HES1P35843 434 aa2.18□□□□□ -2.06
NUP100YKL068W LHS1P36016 881 aa2.18□□□□□ -2.06
NUP100YKL068W SNU114P36048 1008 aaKnown RBP2.18□□□□□ -2.06
NUP100YKL068W MRPL10P36520 322 aa2.18□□□□□ -2.06
NUP100YKL068W YMR262WP38430 313 aa2.18□□□□□ -2.06
NUP100YKL068W MMS21P38632 267 aa2.18□□□□□ -2.06
NUP100YKL068W STP2P38704 541 aa2.18□□□□□ -2.06
NUP100YKL068W SPC97P38863 823 aa2.18□□□□□ -2.06
NUP100YKL068W UIP3P39547 235 aa2.18□□□□□ -2.06
NUP100YKL068W YER130CP39959 443 aa2.18□□□□□ -2.06
NUP100YKL068W BNA3P47039 444 aaKnown RBP2.18□□□□□ -2.06
NUP100YKL068W SAM50P53969 484 aa2.18□□□□□ -2.06
NUP100YKL068W ROT1Q03691 256 aa2.18□□□□□ -2.06
NUP100YKL068W BRX1Q08235 291 aaKnown RBP2.18□□□□□ -2.06
NUP100YKL068W DNL4Q08387 944 aaPredicted RBP2.18□□□□□ -2.06
NUP100YKL068W RMD5Q12508 421 aa2.18□□□□□ -2.06
NUP100YKL068W LAG2Q92325 660 aa2.18□□□□□ -2.06
NUP100YKL068W YOS9Q99220 542 aa2.18□□□□□ -2.06
NUP100YKL068W PMA1P05030 918 aaKnown RBP2.17□□□□□ -2.06
NUP100YKL068W RAD3P06839 778 aa2.17□□□□□ -2.06
NUP100YKL068W GDH1P07262 454 aaKnown RBP2.17□□□□□ -2.06
NUP100YKL068W RIP1P08067 215 aa2.17□□□□□ -2.06
NUP100YKL068W PMA2P19657 947 aa2.17□□□□□ -2.06
NUP100YKL068W SPE2P21182 396 aa2.17□□□□□ -2.06
NUP100YKL068W KRE2P27809 442 aa2.17□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms