RNA–Protein interactions for RNA: YJR060W

CBF1, Transcript of Basic helix-loop-helix (bHLH) protein, yeastyeast

Gene CBF1, Length 1,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF1YJR060W MGM101P32787 269 aaKnown RBP5.09□□□□□ -1.59
CBF1YJR060W CDC13P32797 924 aaKnown RBP5.09□□□□□ -1.59
CBF1YJR060W MRE11P32829 692 aa5.09□□□□□ -1.59
CBF1YJR060W CBF5P33322 483 aaKnown RBP RIP-Chip data5.09□□□□□ -1.59not detected
CBF1YJR060W NUP120P35729 1037 aa5.09□□□□□ -1.59
CBF1YJR060W SOL2P37262 315 aa5.09□□□□□ -1.59
CBF1YJR060W INM1P38710 295 aa5.09□□□□□ -1.59
CBF1YJR060W LRO1P40345 661 aa5.09□□□□□ -1.59
CBF1YJR060W COA1P40452 197 aa5.09□□□□□ -1.59
CBF1YJR060W TIS11P47977 285 aa5.09□□□□□ -1.59
CBF1YJR060W TAF6P53040 516 aa5.09□□□□□ -1.59
CBF1YJR060W YGR054WP53235 642 aaKnown RBP5.09□□□□□ -1.59
CBF1YJR060W GTR2P53290 341 aa5.09□□□□□ -1.59
CBF1YJR060W SLM2P53955 656 aa5.09□□□□□ -1.59
CBF1YJR060W MRS2Q01926 470 aa5.09□□□□□ -1.59
CBF1YJR060W YMR155WQ03795 547 aa5.09□□□□□ -1.59
CBF1YJR060W YDR061WQ12298 539 aa5.09□□□□□ -1.59
CBF1YJR060W YDR262WQ12331 272 aa5.09□□□□□ -1.59
CBF1YJR060W PST1Q12355 444 aa5.09□□□□□ -1.59
CBF1YJR060W YPL247CQ12523 523 aa5.09□□□□□ -1.59
CBF1YJR060W LAG2Q92325 660 aa5.09□□□□□ -1.59
CBF1YJR060W RPL1AP0CX43 217 aaKnown RBP5.08□□□□□ -1.6
CBF1YJR060W RPL1BP0CX44 217 aaKnown RBP5.08□□□□□ -1.6
CBF1YJR060W PTP1P25044 335 aa5.08□□□□□ -1.6
CBF1YJR060W RPS1AP33442 255 aaKnown RBP5.08□□□□□ -1.6
CBF1YJR060W PFK26P40433 827 aaKnown RBP5.08□□□□□ -1.6
CBF1YJR060W STB2P46679 850 aa5.08□□□□□ -1.6
CBF1YJR060W YJR030CP47101 745 aa5.08□□□□□ -1.6
CBF1YJR060W ARE2P53629 642 aaKnown RBP5.08□□□□□ -1.6
CBF1YJR060W GIP3Q03016 1276 aa5.08□□□□□ -1.6
CBF1YJR060W VHS1Q03785 461 aa5.08□□□□□ -1.6
CBF1YJR060W HOF1Q05080 669 aa5.08□□□□□ -1.6
CBF1YJR060W ARR3Q06598 404 aa5.08□□□□□ -1.6
CBF1YJR060W LEU9Q12166 604 aaKnown RBP5.08□□□□□ -1.6
CBF1YJR060W NOT5Q12514 560 aaPredicted RBP5.08□□□□□ -1.6
CBF1YJR060W RRP12Q12754 1228 aaKnown RBP5.08□□□□□ -1.6
CBF1YJR060W SLH1P53327 1967 aaKnown RBP5.07□□□□□ -1.6
CBF1YJR060W TYR1P20049 452 aa5.07□□□□□ -1.6
CBF1YJR060W CDC10P25342 322 aaKnown RBP5.07□□□□□ -1.6
CBF1YJR060W BUB3P26449 341 aa5.07□□□□□ -1.6
CBF1YJR060W SKN1P33336 771 aa5.07□□□□□ -1.6
CBF1YJR060W DHR2P36009 735 aaPredicted RBP5.07□□□□□ -1.6
CBF1YJR060W GCD10P41814 478 aa5.07□□□□□ -1.6
CBF1YJR060W MPS3P47069 682 aa5.07□□□□□ -1.6
CBF1YJR060W MRPL19P53875 158 aa5.07□□□□□ -1.6
CBF1YJR060W RNY1Q02933 434 aaKnown RBP5.07□□□□□ -1.6
CBF1YJR060W YLR456WQ06199 204 aa5.07□□□□□ -1.6
CBF1YJR060W RIF2Q06208 395 aa5.07□□□□□ -1.6
CBF1YJR060W APC9Q12107 265 aa5.07□□□□□ -1.6
CBF1YJR060W YOR114WQ12219 294 aa5.07□□□□□ -1.6
CBF1YJR060W YPR011CQ12251 326 aa5.07□□□□□ -1.6
CBF1YJR060W SEC39Q12745 709 aa5.07□□□□□ -1.6
CBF1YJR060W YCL012CQ8J0M4 134 aa5.07□□□□□ -1.6
CBF1YJR060W ATP2P00830 511 aaKnown RBP5.06□□□□□ -1.6
CBF1YJR060W SPT3P06844 337 aa5.06□□□□□ -1.6
CBF1YJR060W SPS22P25380 463 aa5.06□□□□□ -1.6
CBF1YJR060W ADE1P27616 306 aa5.06□□□□□ -1.6
CBF1YJR060W RPC19P28000 142 aaKnown RBP5.06□□□□□ -1.6
CBF1YJR060W SFC1P33303 322 aa5.06□□□□□ -1.6
CBF1YJR060W TAF14P35189 244 aa5.06□□□□□ -1.6
CBF1YJR060W YCR087C-AP37263 153 aa5.06□□□□□ -1.6
CBF1YJR060W HSM3P38348 480 aa5.06□□□□□ -1.6
CBF1YJR060W BZZ1P38822 633 aa5.06□□□□□ -1.6
CBF1YJR060W HRB1P38922 454 aaKnown RBP RIP-Chip data5.06□□□□□ -1.6not detected
CBF1YJR060W GGC1P38988 300 aa5.06□□□□□ -1.6
CBF1YJR060W LYS1P38998 373 aaRIP-Chip data5.06□□□□□ -1.6not detected
CBF1YJR060W CIN4P39110 191 aa5.06□□□□□ -1.6
CBF1YJR060W ARB1P40024 610 aaKnown RBP5.06□□□□□ -1.6
CBF1YJR060W TDA10P42938 290 aa5.06□□□□□ -1.6
CBF1YJR060W YFR020WP43600 232 aa5.06□□□□□ -1.6
CBF1YJR060W YJR154WP47181 346 aa5.06□□□□□ -1.6
CBF1YJR060W YAP1802P53309 568 aa5.06□□□□□ -1.6
CBF1YJR060W NOP19P53317 196 aaPredicted RBP5.06□□□□□ -1.6
CBF1YJR060W NRM1P53718 249 aa5.06□□□□□ -1.6
CBF1YJR060W TIM10P87108 93 aa5.06□□□□□ -1.6
CBF1YJR060W AAT1Q01802 451 aa5.06□□□□□ -1.6
CBF1YJR060W STP3Q05937 343 aa5.06□□□□□ -1.6
CBF1YJR060W DIC1Q06143 298 aa5.06□□□□□ -1.6
CBF1YJR060W ENT4Q07872 247 aa5.06□□□□□ -1.6
CBF1YJR060W YLR030WQ07967 263 aa5.06□□□□□ -1.6
CBF1YJR060W YPL245WQ12179 454 aaKnown RBP5.06□□□□□ -1.6
CBF1YJR060W RGT2Q12300 763 aa5.06□□□□□ -1.6
CBF1YJR060W YKL033W-AQ86ZR7 236 aa5.06□□□□□ -1.6
CBF1YJR060W TY2A-LR1P0C2J4 438 aa5.05□□□□□ -1.6
CBF1YJR060W COS2P0CX12 379 aa5.05□□□□□ -1.6
CBF1YJR060W COS3P0CX13 379 aa5.05□□□□□ -1.6
CBF1YJR060W TY2A-FP0CX61 438 aa5.05□□□□□ -1.6
CBF1YJR060W TY2A-GR2P0CX62 438 aa5.05□□□□□ -1.6
CBF1YJR060W DAL82P21705 255 aa5.05□□□□□ -1.6
CBF1YJR060W TY2A-CP25383 438 aa5.05□□□□□ -1.6
CBF1YJR060W BUB2P26448 306 aaPredicted RBP5.05□□□□□ -1.6
CBF1YJR060W MSS1P32559 526 aaPredicted RBP5.05□□□□□ -1.6
CBF1YJR060W SRB5P32585 307 aa5.05□□□□□ -1.6
CBF1YJR060W SDH3P33421 198 aa5.05□□□□□ -1.6
CBF1YJR060W HES1P35843 434 aa5.05□□□□□ -1.6
CBF1YJR060W VPS21P36017 210 aaKnown RBP5.05□□□□□ -1.6
CBF1YJR060W RRN10P38204 145 aa5.05□□□□□ -1.6
CBF1YJR060W BMT2P38278 337 aa5.05□□□□□ -1.6
CBF1YJR060W VMA13P41807 478 aaKnown RBP5.05□□□□□ -1.6
CBF1YJR060W COS4P43542 379 aa5.05□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 102.9 ms