RNA–Protein interactions for RNA: YHR039C-A

VMA10, Transcript of Subunit G of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA10, Length 345 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA10	YHR039C-A	TRX1	P22217	103 aa	Known RBP	2.84	□□□□□ -1.95
VMA10	YHR039C-A	SPS22	P25380	463 aa		2.84	□□□□□ -1.95
VMA10	YHR039C-A	RDS1	P25611	832 aa		2.84	□□□□□ -1.95
VMA10	YHR039C-A	PRO3	P32263	286 aa	Known RBP	2.84	□□□□□ -1.95
VMA10	YHR039C-A	AGA1	P32323	725 aa		2.84	□□□□□ -1.95
VMA10	YHR039C-A	MRP4	P32902	394 aa		2.84	□□□□□ -1.95
VMA10	YHR039C-A	YBR056W	P38081	501 aa		2.84	□□□□□ -1.95
VMA10	YHR039C-A	SPP381	P38282	291 aa	Predicted RBP	2.84	□□□□□ -1.95
VMA10	YHR039C-A	YBP1	P38315	674 aa		2.84	□□□□□ -1.95
VMA10	YHR039C-A	MMF1	P40185	145 aa	Known RBP	2.84	□□□□□ -1.95
VMA10	YHR039C-A	MKT1	P40850	830 aa	Known RBP	2.84	□□□□□ -1.95
VMA10	YHR039C-A	IDP2	P41939	412 aa		2.84	□□□□□ -1.95
VMA10	YHR039C-A	SFH5	P47008	294 aa		2.84	□□□□□ -1.95
VMA10	YHR039C-A	STE24	P47154	453 aa		2.84	□□□□□ -1.95
VMA10	YHR039C-A	EFM3	P47163	339 aa		2.84	□□□□□ -1.95
VMA10	YHR039C-A	TOS2	P50078	622 aa		2.84	□□□□□ -1.95
VMA10	YHR039C-A	CUE3	P53137	624 aa	Known RBP	2.84	□□□□□ -1.95
VMA10	YHR039C-A	GOR1	P53839	350 aa		2.84	□□□□□ -1.95
VMA10	YHR039C-A	PDR16	P53860	351 aa	Known RBP	2.84	□□□□□ -1.95
VMA10	YHR039C-A	IBD2	P53892	351 aa		2.84	□□□□□ -1.95
VMA10	YHR039C-A	AQR1	P53943	586 aa		2.84	□□□□□ -1.95
VMA10	YHR039C-A	AAD15	Q08361	143 aa		2.84	□□□□□ -1.95
VMA10	YHR039C-A	HNT3	Q08702	217 aa		2.84	□□□□□ -1.95
VMA10	YHR039C-A	TPT1	Q12272	230 aa	Known RBP	2.84	□□□□□ -1.95
VMA10	YHR039C-A	NBL1	Q3E7Y6	73 aa		2.84	□□□□□ -1.95
VMA10	YHR039C-A	YBR298C-A	Q8TGK4	73 aa		2.84	□□□□□ -1.95
VMA10	YHR039C-A	HEM15	P16622	393 aa		2.83	□□□□□ -1.96
VMA10	YHR039C-A	TIF5	P38431	405 aa	Known RBP	2.83	□□□□□ -1.96
VMA10	YHR039C-A	KRE9	P39005	276 aa		2.83	□□□□□ -1.96
VMA10	YHR039C-A	POP2	P39008	433 aa		2.83	□□□□□ -1.96
VMA10	YHR039C-A	RPA34	P47006	233 aa	Predicted RBP	2.83	□□□□□ -1.96
VMA10	YHR039C-A	MDE1	P47095	244 aa		2.83	□□□□□ -1.96
VMA10	YHR039C-A	BCH1	Q05029	724 aa		2.83	□□□□□ -1.96
VMA10	YHR039C-A	SNX3	Q08826	162 aa	Known RBP	2.83	□□□□□ -1.96
VMA10	YHR039C-A	PPT2	Q12036	173 aa		2.83	□□□□□ -1.96
VMA10	YHR039C-A	STE3	P06783	470 aa		2.82	□□□□□ -1.96
VMA10	YHR039C-A	TAL1	P15019	335 aa	Known RBP	2.82	□□□□□ -1.96
VMA10	YHR039C-A	SLM5	P25345	492 aa	Known RBP	2.82	□□□□□ -1.96
VMA10	YHR039C-A	YCL068C	P25593	260 aa		2.82	□□□□□ -1.96
VMA10	YHR039C-A	PSO2	P30620	661 aa		2.82	□□□□□ -1.96
VMA10	YHR039C-A	TOA1	P32773	286 aa		2.82	□□□□□ -1.96
VMA10	YHR039C-A	TOA2	P32774	122 aa		2.82	□□□□□ -1.96
VMA10	YHR039C-A	ATP3	P38077	311 aa	Known RBP	2.82	□□□□□ -1.96
VMA10	YHR039C-A	MSG5	P38590	489 aa		2.82	□□□□□ -1.96
VMA10	YHR039C-A	JLP2	P40206	208 aa		2.82	□□□□□ -1.96
VMA10	YHR039C-A	TOS3	P43637	560 aa		2.82	□□□□□ -1.96
VMA10	YHR039C-A	SHE4	P51534	789 aa		2.82	□□□□□ -1.96
VMA10	YHR039C-A	RAX1	Q08760	435 aa		2.82	□□□□□ -1.96
VMA10	YHR039C-A	REX3	Q12090	404 aa		2.82	□□□□□ -1.96
VMA10	YHR039C-A	YCL021W-A	Q96VH3	125 aa		2.82	□□□□□ -1.96
VMA10	YHR039C-A	ATP1	P07251	545 aa	Known RBP	2.81	□□□□□ -1.96
VMA10	YHR039C-A	ARF1	P11076	181 aa	Known RBP	2.81	□□□□□ -1.96
VMA10	YHR039C-A	RNA1	P11745	407 aa	Known RBP	2.81	□□□□□ -1.96
VMA10	YHR039C-A	EXG1	P23776	448 aa	Known RBP	2.81	□□□□□ -1.96
VMA10	YHR039C-A	CHK1	P38147	527 aa		2.81	□□□□□ -1.96
VMA10	YHR039C-A	YBL028C	P38202	106 aa		2.81	□□□□□ -1.96
VMA10	YHR039C-A	MTC6	P38849	526 aa		2.81	□□□□□ -1.96
VMA10	YHR039C-A	YIL089W	P40500	205 aa		2.81	□□□□□ -1.96
VMA10	YHR039C-A	MPS2	P53159	387 aa		2.81	□□□□□ -1.96
VMA10	YHR039C-A	YGR117C	P53270	476 aa		2.81	□□□□□ -1.96
VMA10	YHR039C-A	RRN9	P53437	365 aa		2.81	□□□□□ -1.96
VMA10	YHR039C-A	COS1	P53822	381 aa		2.81	□□□□□ -1.96
VMA10	YHR039C-A	PRO2	P54885	456 aa	Known RBP	2.81	□□□□□ -1.96
VMA10	YHR039C-A	CCE1	Q03702	353 aa		2.81	□□□□□ -1.96
VMA10	YHR039C-A	MGR3	Q04472	501 aa		2.81	□□□□□ -1.96
VMA10	YHR039C-A	SCW10	Q04951	389 aa		2.81	□□□□□ -1.96
VMA10	YHR039C-A	YPR078C	Q06813	372 aa		2.81	□□□□□ -1.96
VMA10	YHR039C-A	YLR108C	Q12259	485 aa		2.81	□□□□□ -1.96
VMA10	YHR039C-A	NCA2	Q12374	616 aa		2.81	□□□□□ -1.96
VMA10	YHR039C-A	YER078W-A	Q3E7A2	54 aa		2.81	□□□□□ -1.96
VMA10	YHR039C-A	CAP2	P13517	287 aa		2.8	□□□□□ -1.96
VMA10	YHR039C-A	SAG1	P20840	650 aa		2.8	□□□□□ -1.96
VMA10	YHR039C-A	MUD1	P32605	298 aa	Known RBP	2.8	□□□□□ -1.96
VMA10	YHR039C-A	COX13	P32799	129 aa		2.8	□□□□□ -1.96
VMA10	YHR039C-A	SKT5	P34226	696 aa		2.8	□□□□□ -1.96
VMA10	YHR039C-A	DOA1	P36037	715 aa		2.8	□□□□□ -1.96
VMA10	YHR039C-A	ATM1	P40416	690 aa		2.8	□□□□□ -1.96
VMA10	YHR039C-A	YFL067W	P43537	175 aa		2.8	□□□□□ -1.96
VMA10	YHR039C-A	IMP4	P53941	290 aa	Known RBP	2.8	□□□□□ -1.96
VMA10	YHR039C-A	ASA1	Q06822	443 aa		2.8	□□□□□ -1.96
VMA10	YHR039C-A	LDS2	Q08218	356 aa		2.8	□□□□□ -1.96
VMA10	YHR039C-A	PEX27	Q08580	376 aa		2.8	□□□□□ -1.96
VMA10	YHR039C-A	YOR012W	Q12351	137 aa		2.8	□□□□□ -1.96
VMA10	YHR039C-A	CEX1	Q12453	761 aa		2.8	□□□□□ -1.96
VMA10	YHR039C-A	POM152	P39685	1337 aa		2.79	□□□□□ -1.96
VMA10	YHR039C-A	STF1	P01098	86 aa		2.79	□□□□□ -1.96
VMA10	YHR039C-A	PAB1	P04147	577 aa	Known RBP RIP-Chip data	2.79	□□□□□ -1.96	RIP-Chip
VMA10	YHR039C-A	TPK3	P05986	398 aa		2.79	□□□□□ -1.96
VMA10	YHR039C-A	SSC1	P0CS90	654 aa	Known RBP	2.79	□□□□□ -1.96
VMA10	YHR039C-A	THR4	P16120	514 aa	Known RBP	2.79	□□□□□ -1.96
VMA10	YHR039C-A	CPR4	P25334	318 aa		2.79	□□□□□ -1.96
VMA10	YHR039C-A	PHA2	P32452	334 aa		2.79	□□□□□ -1.96
VMA10	YHR039C-A	YEF1	P32622	495 aa		2.79	□□□□□ -1.96
VMA10	YHR039C-A	RPS0A	P32905	252 aa	Known RBP	2.79	□□□□□ -1.96
VMA10	YHR039C-A	SPT10	P35208	640 aa		2.79	□□□□□ -1.96
VMA10	YHR039C-A	PTK1	P36002	662 aa	Predicted RBP	2.79	□□□□□ -1.96
VMA10	YHR039C-A	PRM5	P40476	318 aa		2.79	□□□□□ -1.96
VMA10	YHR039C-A	YIL067C	P40514	678 aa		2.79	□□□□□ -1.96
VMA10	YHR039C-A	RET3	P53600	189 aa		2.79	□□□□□ -1.96
VMA10	YHR039C-A	PRM1	P53835	661 aa		2.79	□□□□□ -1.96

Retrieved 100 of 5,963 RNA–protein pairs in 51.3 ms