RNA–Protein interactions for RNA: YGL173C

XRN1, Transcript of Evolutionarily-conserved 5'-3' exonuclease, yeastyeast

Gene XRN1, Length 4,587 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
XRN1YGL173C SDO1Q07953 250 aaKnown RBP3.1□□□□□ -1.91
XRN1YGL173C RNH203Q12338 110 aa3.1□□□□□ -1.91
XRN1YGL173C SEY1Q99287 776 aa3.1□□□□□ -1.91
XRN1YGL173C SPS22P25380 463 aa3.1□□□□□ -1.91
XRN1YGL173C DOA4P32571 926 aa3.1□□□□□ -1.91
XRN1YGL173C FRE1P32791 686 aa3.1□□□□□ -1.91
XRN1YGL173C TCD1P38756 429 aa3.1□□□□□ -1.91
XRN1YGL173C SDS3P40505 327 aa3.1□□□□□ -1.91
XRN1YGL173C OKP1P53298 406 aa3.1□□□□□ -1.91
XRN1YGL173C RRN9P53437 365 aa3.1□□□□□ -1.91
XRN1YGL173C SIA1Q12212 622 aa3.1□□□□□ -1.91
XRN1YGL173C PFK27Q12471 397 aaPredicted RBP3.1□□□□□ -1.91
XRN1YGL173C PPR1P07272 904 aaPredicted RBP3.09□□□□□ -1.91
XRN1YGL173C ECM4P36156 370 aa3.09□□□□□ -1.91
XRN1YGL173C RPL32P38061 130 aaKnown RBP3.09□□□□□ -1.91
XRN1YGL173C RRN10P38204 145 aa3.09□□□□□ -1.91
XRN1YGL173C LAG1P38703 411 aa3.09□□□□□ -1.91
XRN1YGL173C MRX5P47007 382 aa3.09□□□□□ -1.91
XRN1YGL173C RIB4P50861 169 aaPredicted RBP3.09□□□□□ -1.91
XRN1YGL173C RMR1P53060 241 aa3.09□□□□□ -1.91
XRN1YGL173C PIB2P53191 635 aa3.09□□□□□ -1.91
XRN1YGL173C YVH1Q02256 364 aaKnown RBP3.09□□□□□ -1.91
XRN1YGL173C RPM2Q02773 1202 aa3.09□□□□□ -1.91
XRN1YGL173C YMR181CQ03231 154 aa3.09□□□□□ -1.91
XRN1YGL173C ATG17Q06410 417 aa3.09□□□□□ -1.91
XRN1YGL173C GET4Q12125 312 aa3.09□□□□□ -1.91
XRN1YGL173C TPT1Q12272 230 aaKnown RBP3.09□□□□□ -1.91
XRN1YGL173C RPL7AP05737 244 aaKnown RBP3.09□□□□□ -1.91
XRN1YGL173C YPK2P18961 677 aa3.09□□□□□ -1.91
XRN1YGL173C DPB2P24482 689 aaPredicted RBP3.09□□□□□ -1.91
XRN1YGL173C PBN1P25580 416 aa3.09□□□□□ -1.91
XRN1YGL173C ATP7P30902 174 aa3.09□□□□□ -1.91
XRN1YGL173C MSK1P32048 576 aa3.09□□□□□ -1.91
XRN1YGL173C BMH2P34730 273 aaKnown RBP3.09□□□□□ -1.91
XRN1YGL173C PTC7P38797 343 aa3.09□□□□□ -1.91
XRN1YGL173C HRB1P38922 454 aaKnown RBP RIP-Chip data3.09□□□□□ -1.91not detected
XRN1YGL173C YHC3P47040 408 aa3.09□□□□□ -1.91
XRN1YGL173C MRPS35P53292 345 aa3.09□□□□□ -1.91
XRN1YGL173C SYO1Q07395 620 aa3.09□□□□□ -1.91
XRN1YGL173C YLR012CQ07927 99 aa3.09□□□□□ -1.91
XRN1YGL173C RPL7BQ12213 244 aaKnown RBP3.09□□□□□ -1.91
XRN1YGL173C ZPS1Q12512 249 aa3.09□□□□□ -1.91
XRN1YGL173C CYC1P00044 109 aaPredicted RBP3.09□□□□□ -1.92
XRN1YGL173C RAS1P01119 309 aa3.09□□□□□ -1.92
XRN1YGL173C ARO4P32449 370 aaKnown RBP3.09□□□□□ -1.92
XRN1YGL173C NDC1P32500 655 aa3.09□□□□□ -1.92
XRN1YGL173C ARN1P38731 627 aa3.09□□□□□ -1.92
XRN1YGL173C TMN3P40071 706 aa3.09□□□□□ -1.92
XRN1YGL173C BIO4P53630 237 aa3.09□□□□□ -1.92
XRN1YGL173C YLR224WQ05947 369 aa3.09□□□□□ -1.92
XRN1YGL173C RAX1Q08760 435 aa3.09□□□□□ -1.92
XRN1YGL173C FKS1P38631 1876 aaKnown RBP3.09□□□□□ -1.92
XRN1YGL173C TDH2P00358 332 aaKnown RBP3.09□□□□□ -1.92
XRN1YGL173C TDH3P00359 332 aaKnown RBP RIP-Chip data3.09□□□□□ -1.92not detected
XRN1YGL173C ARF1P11076 181 aaKnown RBP3.09□□□□□ -1.92
XRN1YGL173C KGD1P20967 1014 aaKnown RBP3.09□□□□□ -1.92
XRN1YGL173C RPL24BP24000 155 aaKnown RBP3.09□□□□□ -1.92
XRN1YGL173C YIM1P28625 365 aa3.09□□□□□ -1.92
XRN1YGL173C YKL075CP36083 450 aa3.09□□□□□ -1.92
XRN1YGL173C RIB5P38145 238 aa3.09□□□□□ -1.92
XRN1YGL173C INM1P38710 295 aa3.09□□□□□ -1.92
XRN1YGL173C IRC8P47046 822 aa3.09□□□□□ -1.92
XRN1YGL173C YPL077CQ02831 240 aa3.09□□□□□ -1.92
XRN1YGL173C IVY1Q04934 453 aa3.09□□□□□ -1.92
XRN1YGL173C BER1Q06688 274 aaKnown RBP3.09□□□□□ -1.92
XRN1YGL173C YDL177CQ12257 170 aa3.09□□□□□ -1.92
XRN1YGL173C ECM3Q99252 613 aa3.09□□□□□ -1.92
XRN1YGL173C MRP13P12686 339 aa3.08□□□□□ -1.92
XRN1YGL173C RHB1P25378 209 aa3.08□□□□□ -1.92
XRN1YGL173C ATP11P32453 318 aa3.08□□□□□ -1.92
XRN1YGL173C IML3P38265 245 aa3.08□□□□□ -1.92
XRN1YGL173C DBP8P38719 431 aa3.08□□□□□ -1.92
XRN1YGL173C YHR035WP38769 630 aa3.08□□□□□ -1.92
XRN1YGL173C SAS2P40963 338 aa3.08□□□□□ -1.92
XRN1YGL173C CUS2P53830 285 aaPredicted RBP3.08□□□□□ -1.92
XRN1YGL173C ASI1P54074 624 aa3.08□□□□□ -1.92
XRN1YGL173C PLM2Q04383 521 aa3.08□□□□□ -1.92
XRN1YGL173C RRN11Q04712 507 aa3.08□□□□□ -1.92
XRN1YGL173C YLR281CQ05863 155 aa3.08□□□□□ -1.92
XRN1YGL173C YLR358CO13565 187 aa3.08□□□□□ -1.92
XRN1YGL173C YMR085WP0CF18 432 aa3.08□□□□□ -1.92
XRN1YGL173C ATP10P18496 279 aa3.08□□□□□ -1.92
XRN1YGL173C FUB1P25659 250 aa3.08□□□□□ -1.92
XRN1YGL173C ERG7P38604 731 aa3.08□□□□□ -1.92
XRN1YGL173C PRE6P40303 254 aaKnown RBP3.08□□□□□ -1.92
XRN1YGL173C YGR126WP53274 230 aa3.08□□□□□ -1.92
XRN1YGL173C PET117Q02771 107 aa3.08□□□□□ -1.92
XRN1YGL173C UBP16Q02863 499 aa3.08□□□□□ -1.92
XRN1YGL173C CTL1Q03220 320 aaKnown RBP3.08□□□□□ -1.92
XRN1YGL173C INP2Q03824 705 aa3.08□□□□□ -1.92
XRN1YGL173C CAB5Q03941 241 aa3.08□□□□□ -1.92
XRN1YGL173C YDL086WQ07505 273 aa3.08□□□□□ -1.92
XRN1YGL173C PAA1Q12447 191 aaKnown RBP3.08□□□□□ -1.92
XRN1YGL173C MYO1P08964 1928 aa3.08□□□□□ -1.92
XRN1YGL173C RAD7P06779 565 aa3.08□□□□□ -1.92
XRN1YGL173C SCH9P11792 824 aaKnown RBP3.08□□□□□ -1.92
XRN1YGL173C DMC1P25453 334 aa3.08□□□□□ -1.92
XRN1YGL173C NRP1P32770 719 aaKnown RBP RIP-Chip data3.08□□□□□ -1.92not detected
XRN1YGL173C BUD2P33314 1104 aa3.08□□□□□ -1.92
XRN1YGL173C LST4P34239 828 aa3.08□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 55.4 ms