RNA–Protein interactions for RNA: YGL155W

CDC43, Transcript of Beta subunit of geranylgeranyltransferase type I, yeastyeast

Gene CDC43, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC43YGL155W NDE1P40215 560 aa5.14□□□□□ -1.59
CDC43YGL155W YIR016WP40572 265 aa5.14□□□□□ -1.59
CDC43YGL155W SER2P42941 309 aa5.14□□□□□ -1.59
CDC43YGL155W CAK1P43568 368 aaPredicted RBP5.14□□□□□ -1.59
CDC43YGL155W PPT1P53043 513 aa5.14□□□□□ -1.59
CDC43YGL155W SWC4P53201 476 aa5.14□□□□□ -1.59
CDC43YGL155W ZRG17P53735 605 aa5.14□□□□□ -1.59
CDC43YGL155W GIP3Q03016 1276 aa5.14□□□□□ -1.59
CDC43YGL155W YPL034WQ03083 165 aa5.14□□□□□ -1.59
CDC43YGL155W MAK3Q03503 176 aa5.14□□□□□ -1.59
CDC43YGL155W TRM82Q03774 444 aa5.14□□□□□ -1.59
CDC43YGL155W ARX1Q03862 593 aaKnown RBP5.14□□□□□ -1.59
CDC43YGL155W YDR514CQ04408 483 aa5.14□□□□□ -1.59
CDC43YGL155W YPR196WQ06595 470 aa5.14□□□□□ -1.59
CDC43YGL155W GSH2Q08220 491 aa5.14□□□□□ -1.59
CDC43YGL155W DIN7Q12086 430 aa5.14□□□□□ -1.59
CDC43YGL155W ATG29Q12092 213 aa5.14□□□□□ -1.59
CDC43YGL155W NOP56Q12460 504 aaKnown RBP RIP-Chip data5.14□□□□□ -1.59not detected
CDC43YGL155W ALG7P07286 448 aa5.13□□□□□ -1.59
CDC43YGL155W SAM35P14693 329 aa5.13□□□□□ -1.59
CDC43YGL155W MER1P16523 270 aa5.13□□□□□ -1.59
CDC43YGL155W CLN2P20438 545 aa5.13□□□□□ -1.59
CDC43YGL155W VPS33P20795 691 aa5.13□□□□□ -1.59
CDC43YGL155W DBF2P22204 572 aa5.13□□□□□ -1.59
CDC43YGL155W RPS1BP23248 255 aaKnown RBP5.13□□□□□ -1.59
CDC43YGL155W CHA1P25379 360 aaKnown RBP5.13□□□□□ -1.59
CDC43YGL155W SYP1P25623 870 aaKnown RBP5.13□□□□□ -1.59
CDC43YGL155W ARE1P25628 610 aa5.13□□□□□ -1.59
CDC43YGL155W HIR2P32480 875 aa5.13□□□□□ -1.59
CDC43YGL155W SSO1P32867 290 aa5.13□□□□□ -1.59
CDC43YGL155W PMT1P33775 817 aa5.13□□□□□ -1.59
CDC43YGL155W IRS4P36115 615 aaKnown RBP5.13□□□□□ -1.59
CDC43YGL155W BAP2P38084 609 aa5.13□□□□□ -1.59
CDC43YGL155W MUM2P38236 366 aa5.13□□□□□ -1.59
CDC43YGL155W ATG14P38270 344 aa5.13□□□□□ -1.59
CDC43YGL155W GIM4P40005 111 aaKnown RBP5.13□□□□□ -1.59
CDC43YGL155W PCL6P40038 420 aa5.13□□□□□ -1.59
CDC43YGL155W LSM5P40089 93 aaKnown RBP5.13□□□□□ -1.59
CDC43YGL155W RRG9P40156 214 aa5.13□□□□□ -1.59
CDC43YGL155W PRE6P40303 254 aaKnown RBP5.13□□□□□ -1.59
CDC43YGL155W SSU1P41930 458 aa5.13□□□□□ -1.59
CDC43YGL155W YJL043WP47053 257 aa5.13□□□□□ -1.59
CDC43YGL155W STE24P47154 453 aa5.13□□□□□ -1.59
CDC43YGL155W HMS2P47175 358 aa5.13□□□□□ -1.59
CDC43YGL155W PYK2P52489 506 aaKnown RBP5.13□□□□□ -1.59
CDC43YGL155W RTS3P53289 263 aa5.13□□□□□ -1.59
CDC43YGL155W CPR8P53728 308 aa5.13□□□□□ -1.59
CDC43YGL155W YNL181WP53878 407 aa5.13□□□□□ -1.59
CDC43YGL155W YSA1Q01976 231 aa5.13□□□□□ -1.59
CDC43YGL155W GRX5Q02784 150 aa5.13□□□□□ -1.59
CDC43YGL155W PLP1Q04004 230 aa5.13□□□□□ -1.59
CDC43YGL155W SWF1Q04629 336 aa5.13□□□□□ -1.59
CDC43YGL155W YLR446WQ06204 433 aa5.13□□□□□ -1.59
CDC43YGL155W YPS7Q06325 596 aa5.13□□□□□ -1.59
CDC43YGL155W ACF2Q12168 779 aa5.13□□□□□ -1.59
CDC43YGL155W YDR215CQ12240 137 aa5.13□□□□□ -1.59
CDC43YGL155W HSP42Q12329 375 aa5.13□□□□□ -1.59
CDC43YGL155W MRX4Q12467 430 aa5.13□□□□□ -1.59
CDC43YGL155W YPR053CQ6Q5F3 151 aa5.13□□□□□ -1.59
CDC43YGL155W PDE2P06776 526 aa5.12□□□□□ -1.59
CDC43YGL155W ADE5,7P07244 802 aaKnown RBP5.12□□□□□ -1.59
CDC43YGL155W MSF1P08425 469 aa5.12□□□□□ -1.59
CDC43YGL155W TY2A-LR1P0C2J4 438 aa5.12□□□□□ -1.59
CDC43YGL155W TY2A-FP0CX61 438 aa5.12□□□□□ -1.59
CDC43YGL155W TY2A-GR2P0CX62 438 aa5.12□□□□□ -1.59
CDC43YGL155W TRX3P25372 127 aa5.12□□□□□ -1.59
CDC43YGL155W TY2A-CP25383 438 aa5.12□□□□□ -1.59
CDC43YGL155W PEX34P25584 144 aa5.12□□□□□ -1.59
CDC43YGL155W SBA1P28707 216 aaKnown RBP5.12□□□□□ -1.59
CDC43YGL155W GMH1P36125 273 aa5.12□□□□□ -1.59
CDC43YGL155W YBR063CP38083 404 aa5.12□□□□□ -1.59
CDC43YGL155W IML3P38265 245 aa5.12□□□□□ -1.59
CDC43YGL155W YHR033WP38690 423 aa5.12□□□□□ -1.59
CDC43YGL155W IPI1P38803 334 aaPredicted RBP5.12□□□□□ -1.59
CDC43YGL155W YPT35P38815 214 aaKnown RBP5.12□□□□□ -1.59
CDC43YGL155W AIM46P38885 310 aa5.12□□□□□ -1.59
CDC43YGL155W TIM17P39515 158 aa5.12□□□□□ -1.59
CDC43YGL155W LAS21P40367 830 aa5.12□□□□□ -1.59
CDC43YGL155W PFA3P42836 336 aa5.12□□□□□ -1.59
CDC43YGL155W JHD2P47156 728 aaPredicted RBP5.12□□□□□ -1.59
CDC43YGL155W PAC10P48363 199 aa5.12□□□□□ -1.59
CDC43YGL155W MUP1P50276 574 aa5.12□□□□□ -1.59
CDC43YGL155W FLC3P53121 802 aa5.12□□□□□ -1.59
CDC43YGL155W PNG1Q02890 363 aa5.12□□□□□ -1.59
CDC43YGL155W NOG1Q02892 647 aaKnown RBP5.12□□□□□ -1.59
CDC43YGL155W ABZ2Q03266 374 aa5.12□□□□□ -1.59
CDC43YGL155W TY2A-DR2Q03483 438 aa5.12□□□□□ -1.59
CDC43YGL155W NSE5Q03718 556 aa5.12□□□□□ -1.59
CDC43YGL155W RIM13Q03792 727 aa5.12□□□□□ -1.59
CDC43YGL155W FIN1Q03898 291 aa5.12□□□□□ -1.59
CDC43YGL155W TEN1Q07921 160 aa5.12□□□□□ -1.59
CDC43YGL155W YLR036CQ07986 203 aa5.12□□□□□ -1.59
CDC43YGL155W SAM4Q08985 325 aaKnown RBP5.12□□□□□ -1.59
CDC43YGL155W SIA1Q12212 622 aa5.12□□□□□ -1.59
CDC43YGL155W NFI1Q12216 726 aa5.12□□□□□ -1.59
CDC43YGL155W TY2A-BQ12260 438 aa5.12□□□□□ -1.59
CDC43YGL155W TY2A-OR2Q12293 438 aa5.12□□□□□ -1.59
CDC43YGL155W TY2A-DR1Q12392 438 aa5.12□□□□□ -1.59
CDC43YGL155W TY2A-OR1Q12439 438 aa5.12□□□□□ -1.59
CDC43YGL155W TY2A-DR3Q99303 438 aa5.12□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 38.5 ms