RNA–Protein interactions for RNA: YFL044C

OTU1, Transcript of Deubiquitylation enzyme that binds to the chaperone-ATPase Cdc48p, yeastyeast

Gene OTU1, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
OTU1YFL044C HUA2Q12134 243 aa3.6□□□□□ -1.83
OTU1YFL044C RPL7BQ12213 244 aaKnown RBP3.6□□□□□ -1.83
OTU1YFL044C YLR111WQ12528 110 aa3.6□□□□□ -1.83
OTU1YFL044C YBR126W-AQ8TGU7 68 aa3.6□□□□□ -1.83
OTU1YFL044C RPB2P08518 1224 aaKnown RBP3.59□□□□□ -1.83
OTU1YFL044C RSR1P13856 272 aa3.59□□□□□ -1.83
OTU1YFL044C PRP16P15938 1071 aaPredicted RBP3.59□□□□□ -1.83
OTU1YFL044C YCK1P23291 538 aa3.59□□□□□ -1.83
OTU1YFL044C ROX1P25042 368 aa3.59□□□□□ -1.83
OTU1YFL044C YCL042WP25572 119 aa3.59□□□□□ -1.83
OTU1YFL044C CPR3P25719 182 aa3.59□□□□□ -1.83
OTU1YFL044C BUD14P27637 709 aa3.59□□□□□ -1.83
OTU1YFL044C MTH1P35198 433 aa3.59□□□□□ -1.83
OTU1YFL044C POP4P38336 279 aa3.59□□□□□ -1.83
OTU1YFL044C MSG5P38590 489 aa3.59□□□□□ -1.83
OTU1YFL044C YJL206CP39529 758 aa3.59□□□□□ -1.83
OTU1YFL044C HAT2P39984 401 aa3.59□□□□□ -1.83
OTU1YFL044C UTP18P40362 594 aaPredicted RBP3.59□□□□□ -1.83
OTU1YFL044C ARC1P46672 376 aaKnown RBP3.59□□□□□ -1.83
OTU1YFL044C TRM9P49957 279 aa3.59□□□□□ -1.83
OTU1YFL044C LCL3P53153 274 aa3.59□□□□□ -1.83
OTU1YFL044C EFR3Q03653 782 aaKnown RBP3.59□□□□□ -1.83
OTU1YFL044C YMR155WQ03795 547 aa3.59□□□□□ -1.83
OTU1YFL044C YET2Q04210 160 aa3.59□□□□□ -1.83
OTU1YFL044C YMR034CQ05131 434 aaPredicted RBP3.59□□□□□ -1.83
OTU1YFL044C CUE5Q08412 411 aaKnown RBP3.59□□□□□ -1.83
OTU1YFL044C RAX1Q08760 435 aa3.59□□□□□ -1.83
OTU1YFL044C NUS1Q12063 375 aa3.59□□□□□ -1.83
OTU1YFL044C ATG29Q12092 213 aa3.59□□□□□ -1.83
OTU1YFL044C BRR1Q99177 341 aaPredicted RBP3.59□□□□□ -1.83
OTU1YFL044C GCN4P03069 281 aa3.58□□□□□ -1.84
OTU1YFL044C SEC53P07283 254 aaKnown RBP3.58□□□□□ -1.84
OTU1YFL044C YML002WP0CF17 737 aa3.58□□□□□ -1.84
OTU1YFL044C NSP1P14907 823 aaKnown RBP3.58□□□□□ -1.84
OTU1YFL044C HSP26P15992 214 aaKnown RBP RIP-Chip data3.58□□□□□ -1.84not detected
OTU1YFL044C RRP43P25359 394 aaPredicted RBP3.58□□□□□ -1.84
OTU1YFL044C DMC1P25453 334 aa3.58□□□□□ -1.84
OTU1YFL044C ADE1P27616 306 aa3.58□□□□□ -1.84
OTU1YFL044C YJU2P28320 278 aaPredicted RBP3.58□□□□□ -1.84
OTU1YFL044C URA10P30402 227 aa3.58□□□□□ -1.84
OTU1YFL044C TPS2P31688 896 aaKnown RBP3.58□□□□□ -1.84
OTU1YFL044C BYE1P36106 594 aa3.58□□□□□ -1.84
OTU1YFL044C SOL2P37262 315 aa3.58□□□□□ -1.84
OTU1YFL044C MNL1P38888 796 aa3.58□□□□□ -1.84
OTU1YFL044C PMT6P42934 759 aa3.58□□□□□ -1.84
OTU1YFL044C IBA57P47158 497 aa3.58□□□□□ -1.84
OTU1YFL044C YIP4P53093 235 aa3.58□□□□□ -1.84
OTU1YFL044C YGR015CP53208 328 aa3.58□□□□□ -1.84
OTU1YFL044C SNF12P53628 566 aa3.58□□□□□ -1.84
OTU1YFL044C YNL092WP53934 400 aa3.58□□□□□ -1.84
OTU1YFL044C ERG13P54839 491 aaKnown RBP3.58□□□□□ -1.84
OTU1YFL044C YMR114CQ04471 368 aaKnown RBP3.58□□□□□ -1.84
OTU1YFL044C YLR352WQ06479 807 aa3.58□□□□□ -1.84
OTU1YFL044C AKR2Q12013 749 aa3.58□□□□□ -1.84
OTU1YFL044C YOR114WQ12219 294 aa3.58□□□□□ -1.84
OTU1YFL044C STE2D6VTK4 431 aa3.57□□□□□ -1.84
OTU1YFL044C YCR102CP25608 368 aa3.57□□□□□ -1.84
OTU1YFL044C YCR061WP25639 631 aa3.57□□□□□ -1.84
OTU1YFL044C PMT2P31382 759 aa3.57□□□□□ -1.84
OTU1YFL044C ERG3P32353 365 aa3.57□□□□□ -1.84
OTU1YFL044C IME2P32581 645 aa3.57□□□□□ -1.84
OTU1YFL044C NPL6P32832 435 aa3.57□□□□□ -1.84
OTU1YFL044C PCH2P38126 564 aa3.57□□□□□ -1.84
OTU1YFL044C YHI9P38765 294 aa3.57□□□□□ -1.84
OTU1YFL044C GGC1P38988 300 aa3.57□□□□□ -1.84
OTU1YFL044C SEC28P40509 296 aaKnown RBP3.57□□□□□ -1.84
OTU1YFL044C ARF3P40994 183 aaRIP-Chip data3.57□□□□□ -1.84not detected
OTU1YFL044C YFL012WP43580 148 aa3.57□□□□□ -1.84
OTU1YFL044C SAE2P46946 345 aa3.57□□□□□ -1.84
OTU1YFL044C HOC1P47124 396 aa3.57□□□□□ -1.84
OTU1YFL044C JHD2P47156 728 aaPredicted RBP3.57□□□□□ -1.84
OTU1YFL044C YJR149WP47177 404 aa3.57□□□□□ -1.84
OTU1YFL044C MDM34P53083 459 aa3.57□□□□□ -1.84
OTU1YFL044C ERG26P53199 349 aaKnown RBP3.57□□□□□ -1.84
OTU1YFL044C BUD17P53727 317 aa3.57□□□□□ -1.84
OTU1YFL044C BOP3P53958 396 aa3.57□□□□□ -1.84
OTU1YFL044C AAT1Q01802 451 aa3.57□□□□□ -1.84
OTU1YFL044C NGL2Q03264 515 aaKnown RBP3.57□□□□□ -1.84
OTU1YFL044C ROY1Q04847 553 aa3.57□□□□□ -1.84
OTU1YFL044C CDC123Q05791 360 aa3.57□□□□□ -1.84
OTU1YFL044C YPR022CQ12139 1133 aa3.57□□□□□ -1.84
OTU1YFL044C YOR342CQ12182 319 aa3.57□□□□□ -1.84
OTU1YFL044C ICT1Q12385 394 aa3.57□□□□□ -1.84
OTU1YFL044C ERG27Q12452 347 aaKnown RBP3.57□□□□□ -1.84
OTU1YFL044C MGT1P26188 188 aa3.56□□□□□ -1.84
OTU1YFL044C URA7P28274 579 aaKnown RBP3.56□□□□□ -1.84
OTU1YFL044C FAA1P30624 700 aaKnown RBP3.56□□□□□ -1.84
OTU1YFL044C RIM1P32445 135 aaKnown RBP3.56□□□□□ -1.84
OTU1YFL044C LOT5P34234 306 aa3.56□□□□□ -1.84
OTU1YFL044C YKL100CP34248 587 aa3.56□□□□□ -1.84
OTU1YFL044C KKQ8P36004 724 aa3.56□□□□□ -1.84
OTU1YFL044C MIA40P36046 403 aa3.56□□□□□ -1.84
OTU1YFL044C YBL029WP38201 376 aa3.56□□□□□ -1.84
OTU1YFL044C TDP1P38319 544 aa3.56□□□□□ -1.84
OTU1YFL044C VHC1P38329 1120 aa3.56□□□□□ -1.84
OTU1YFL044C ARO9P38840 513 aaPredicted RBP3.56□□□□□ -1.84
OTU1YFL044C GPI16P38875 610 aa3.56□□□□□ -1.84
OTU1YFL044C SEC9P40357 651 aa3.56□□□□□ -1.84
OTU1YFL044C YIL152WP40455 235 aa3.56□□□□□ -1.84
OTU1YFL044C OCA1P50946 238 aaPredicted RBP3.56□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 46.1 ms