RNA–Protein interactions for RNA: YEL012W

UBC8, Transcript of Ubiquitin-conjugating enzyme that regulates gluconeogenesis, yeast

Gene UBC8, Length 657 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC8	YEL012W	GID7	P25569	745 aa		4.02	□□□□□ -1.77
UBC8	YEL012W	YCR099C	P25657	155 aa		4.02	□□□□□ -1.77
UBC8	YEL012W	NAM9	P27929	486 aa		4.02	□□□□□ -1.77
UBC8	YEL012W	SFC1	P33303	322 aa		4.02	□□□□□ -1.77
UBC8	YEL012W	YHL049C	P38722	271 aa		4.02	□□□□□ -1.77
UBC8	YEL012W	SEC31	P38968	1273 aa	Known RBP	4.02	□□□□□ -1.77
UBC8	YEL012W	SEO1	P39709	593 aa		4.02	□□□□□ -1.77
UBC8	YEL012W	LCP5	P40079	357 aa	Predicted RBP	4.02	□□□□□ -1.77
UBC8	YEL012W	UTP18	P40362	594 aa	Predicted RBP	4.02	□□□□□ -1.77
UBC8	YEL012W	YFL064C	P43540	174 aa		4.02	□□□□□ -1.77
UBC8	YEL012W	YFL012W	P43580	148 aa		4.02	□□□□□ -1.77
UBC8	YEL012W	TAX4	P47030	604 aa		4.02	□□□□□ -1.77
UBC8	YEL012W	JHD2	P47156	728 aa	Predicted RBP	4.02	□□□□□ -1.77
UBC8	YEL012W	DCP2	P53550	970 aa	Known RBP	4.02	□□□□□ -1.77
UBC8	YEL012W	EFM6	P53970	246 aa		4.02	□□□□□ -1.77
UBC8	YEL012W	VTA1	Q06263	330 aa		4.02	□□□□□ -1.77
UBC8	YEL012W	OSW1	Q08692	278 aa		4.02	□□□□□ -1.77
UBC8	YEL012W	YOL107W	Q12239	342 aa		4.02	□□□□□ -1.77
UBC8	YEL012W	YBL111C	Q3E7Y5	667 aa		4.02	□□□□□ -1.77
UBC8	YEL012W	YBR126W-A	Q8TGU7	68 aa		4.02	□□□□□ -1.77
UBC8	YEL012W	YBR085C-A	O43137	85 aa		4.01	□□□□□ -1.77
UBC8	YEL012W	ILV2	P07342	687 aa	Known RBP	4.01	□□□□□ -1.77
UBC8	YEL012W	GAL7	P08431	366 aa		4.01	□□□□□ -1.77
UBC8	YEL012W	PET111	P08468	800 aa		4.01	□□□□□ -1.77
UBC8	YEL012W	NSP1	P14907	823 aa	Known RBP	4.01	□□□□□ -1.77
UBC8	YEL012W	PRP16	P15938	1071 aa	Predicted RBP	4.01	□□□□□ -1.77
UBC8	YEL012W	FUR1	P18562	216 aa	Known RBP	4.01	□□□□□ -1.77
UBC8	YEL012W	TYR1	P20049	452 aa		4.01	□□□□□ -1.77
UBC8	YEL012W	MXR2	P25566	168 aa		4.01	□□□□□ -1.77
UBC8	YEL012W	PPZ2	P33329	710 aa		4.01	□□□□□ -1.77
UBC8	YEL012W	HOT13	P36078	116 aa		4.01	□□□□□ -1.77
UBC8	YEL012W	MRPL15	P36523	253 aa		4.01	□□□□□ -1.77
UBC8	YEL012W	RIX1	P38883	763 aa	Predicted RBP	4.01	□□□□□ -1.77
UBC8	YEL012W	GAT1	P43574	510 aa		4.01	□□□□□ -1.77
UBC8	YEL012W	KAP114	P53067	1004 aa		4.01	□□□□□ -1.77
UBC8	YEL012W	RSM28	Q03430	361 aa		4.01	□□□□□ -1.77
UBC8	YEL012W	TRM12	Q04235	462 aa		4.01	□□□□□ -1.77
UBC8	YEL012W	NMD4	Q12129	218 aa		4.01	□□□□□ -1.77
UBC8	YEL012W	SPE4	Q12455	300 aa		4.01	□□□□□ -1.77
UBC8	YEL012W	HSH49	Q99181	213 aa	Predicted RBP	4.01	□□□□□ -1.77
UBC8	YEL012W	SLH1	P53327	1967 aa	Known RBP	4	□□□□□ -1.77
UBC8	YEL012W	CHO1	P08456	276 aa		4	□□□□□ -1.77
UBC8	YEL012W	PRP2	P20095	876 aa	Predicted RBP	4	□□□□□ -1.77
UBC8	YEL012W	PWP1	P21304	576 aa	Known RBP	4	□□□□□ -1.77
UBC8	YEL012W	SEC62	P21825	274 aa		4	□□□□□ -1.77
UBC8	YEL012W	YCL068C	P25593	260 aa		4	□□□□□ -1.77
UBC8	YEL012W	CMK1	P27466	446 aa	Known RBP	4	□□□□□ -1.77
UBC8	YEL012W	MRP21	P38175	177 aa		4	□□□□□ -1.77
UBC8	YEL012W	SMF2	P38778	549 aa		4	□□□□□ -1.77
UBC8	YEL012W	END3	P39013	349 aa		4	□□□□□ -1.77
UBC8	YEL012W	ECM10	P39987	644 aa		4	□□□□□ -1.77
UBC8	YEL012W	VRG4	P40107	337 aa		4	□□□□□ -1.77
UBC8	YEL012W	CIN1	P40987	1014 aa		4	□□□□□ -1.77
UBC8	YEL012W	IRC6	P43615	237 aa		4	□□□□□ -1.77
UBC8	YEL012W	IBA57	P47158	497 aa		4	□□□□□ -1.77
UBC8	YEL012W	MRS2	Q01926	470 aa		4	□□□□□ -1.77
UBC8	YEL012W	PET117	Q02771	107 aa		4	□□□□□ -1.77
UBC8	YEL012W	CCE1	Q03702	353 aa		4	□□□□□ -1.77
UBC8	YEL012W	YET2	Q04210	160 aa		4	□□□□□ -1.77
UBC8	YEL012W	MDM30	Q05930	598 aa		4	□□□□□ -1.77
UBC8	YEL012W	TSR2	Q06672	205 aa	Known RBP	4	□□□□□ -1.77
UBC8	YEL012W	FMP45	Q07651	309 aa		4	□□□□□ -1.77
UBC8	YEL012W	TEN1	Q07921	160 aa		4	□□□□□ -1.77
UBC8	YEL012W	YOL159C	Q08300	171 aa		4	□□□□□ -1.77
UBC8	YEL012W	YOR114W	Q12219	294 aa		4	□□□□□ -1.77
UBC8	YEL012W	PST1	Q12355	444 aa		4	□□□□□ -1.77
UBC8	YEL012W	LAG2	Q92325	660 aa		4	□□□□□ -1.77
UBC8	YEL012W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	3.99	□□□□□ -1.77	not detected
UBC8	YEL012W	YCL042W	P25572	119 aa		3.99	□□□□□ -1.77
UBC8	YEL012W	ILV6	P25605	309 aa	Known RBP	3.99	□□□□□ -1.77
UBC8	YEL012W	BUB3	P26449	341 aa		3.99	□□□□□ -1.77
UBC8	YEL012W	PDB1	P32473	366 aa	Known RBP	3.99	□□□□□ -1.77
UBC8	YEL012W	ORC2	P32833	620 aa		3.99	□□□□□ -1.77
UBC8	YEL012W	TIP20	P33891	701 aa		3.99	□□□□□ -1.77
UBC8	YEL012W	CAB3	P36076	571 aa		3.99	□□□□□ -1.77
UBC8	YEL012W	STB6	P36085	766 aa		3.99	□□□□□ -1.77
UBC8	YEL012W	MRPL10	P36520	322 aa		3.99	□□□□□ -1.77
UBC8	YEL012W	SOL2	P37262	315 aa		3.99	□□□□□ -1.77
UBC8	YEL012W	RKM3	P38222	552 aa		3.99	□□□□□ -1.77
UBC8	YEL012W	TCD1	P38756	429 aa		3.99	□□□□□ -1.77
UBC8	YEL012W	AZF1	P41696	914 aa		3.99	□□□□□ -1.77
UBC8	YEL012W	SED5	Q01590	340 aa		3.99	□□□□□ -1.77
UBC8	YEL012W	TDA9	Q04545	1251 aa		3.99	□□□□□ -1.77
UBC8	YEL012W	RRN11	Q04712	507 aa		3.99	□□□□□ -1.77
UBC8	YEL012W	RAX1	Q08760	435 aa		3.99	□□□□□ -1.77
UBC8	YEL012W	DAS2	Q12084	232 aa		3.99	□□□□□ -1.77
UBC8	YEL012W	GTT2	Q12390	233 aa		3.99	□□□□□ -1.77
UBC8	YEL012W	NOP58	Q12499	511 aa	Known RBP	3.99	□□□□□ -1.77
UBC8	YEL012W	AVL9	Q12500	764 aa		3.99	□□□□□ -1.77
UBC8	YEL012W	CDC21	P06785	304 aa		3.98	□□□□□ -1.77
UBC8	YEL012W	YAR066W	P0CX18	203 aa		3.98	□□□□□ -1.77
UBC8	YEL012W	YHR214W	P0CX19	203 aa		3.98	□□□□□ -1.77
UBC8	YEL012W	CHA1	P25379	360 aa	Known RBP	3.98	□□□□□ -1.77
UBC8	YEL012W	SMI1	P32566	505 aa		3.98	□□□□□ -1.77
UBC8	YEL012W	MNN2	P38069	597 aa		3.98	□□□□□ -1.77
UBC8	YEL012W	MAK5	P38112	773 aa	Predicted RBP	3.98	□□□□□ -1.77
UBC8	YEL012W	PCH2	P38126	564 aa		3.98	□□□□□ -1.77
UBC8	YEL012W	APD1	P38281	316 aa		3.98	□□□□□ -1.77
UBC8	YEL012W	RCK2	P38623	610 aa		3.98	□□□□□ -1.77
UBC8	YEL012W	YHR127W	P38833	243 aa	Known RBP	3.98	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 41.1 ms