RNA–Protein interactions for RNA: YDR481C

PHO8, Transcript of Repressible vacuolar alkaline phosphatase, yeast

Gene PHO8, Length 1,701 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PHO8	YDR481C	REX3	Q12090	404 aa		4.92	□□□□□ -1.62
PHO8	YDR481C	MMP1	Q12372	583 aa		4.92	□□□□□ -1.62
PHO8	YDR481C	YSF3	P0C074	85 aa	Predicted RBP	4.91	□□□□□ -1.62
PHO8	YDR481C	ZWF1	P11412	505 aa	Known RBP	4.91	□□□□□ -1.62
PHO8	YDR481C	MER1	P16523	270 aa		4.91	□□□□□ -1.62
PHO8	YDR481C	MCK1	P21965	375 aa	Known RBP	4.91	□□□□□ -1.62
PHO8	YDR481C	GPI12	P23797	304 aa		4.91	□□□□□ -1.62
PHO8	YDR481C	CPR3	P25719	182 aa		4.91	□□□□□ -1.62
PHO8	YDR481C	TUL1	P36096	758 aa		4.91	□□□□□ -1.62
PHO8	YDR481C	YBR139W	P38109	508 aa		4.91	□□□□□ -1.62
PHO8	YDR481C	IFA38	P38286	347 aa		4.91	□□□□□ -1.62
PHO8	YDR481C	YHR218W	P38899	603 aa		4.91	□□□□□ -1.62
PHO8	YDR481C	ARF3	P40994	183 aa	RIP-Chip data	4.91	□□□□□ -1.62	RIP-Chip
PHO8	YDR481C	SNO3	P43544	222 aa		4.91	□□□□□ -1.62
PHO8	YDR481C	APS3	P47064	194 aa		4.91	□□□□□ -1.62
PHO8	YDR481C	OCA1	P50946	238 aa	Predicted RBP	4.91	□□□□□ -1.62
PHO8	YDR481C	GET1	P53192	235 aa		4.91	□□□□□ -1.62
PHO8	YDR481C	YGR079W	P53249	370 aa		4.91	□□□□□ -1.62
PHO8	YDR481C	GPI1	P53306	609 aa		4.91	□□□□□ -1.62
PHO8	YDR481C	ENT2	Q05785	613 aa		4.91	□□□□□ -1.62
PHO8	YDR481C	ATG38	Q05789	226 aa	Known RBP	4.91	□□□□□ -1.62
PHO8	YDR481C	REH1	Q06709	432 aa		4.91	□□□□□ -1.62
PHO8	YDR481C	RAX1	Q08760	435 aa		4.91	□□□□□ -1.62
PHO8	YDR481C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
PHO8	YDR481C	ADF1	Q2V2Q1	113 aa		4.91	□□□□□ -1.62
PHO8	YDR481C	FAS1	P07149	2051 aa	Known RBP	4.9	□□□□□ -1.62
PHO8	YDR481C	GAL3	P13045	520 aa		4.9	□□□□□ -1.62
PHO8	YDR481C	SEC62	P21825	274 aa		4.9	□□□□□ -1.62
PHO8	YDR481C	CLB3	P24870	427 aa		4.9	□□□□□ -1.62
PHO8	YDR481C	NAM9	P27929	486 aa		4.9	□□□□□ -1.62
PHO8	YDR481C	LHP1	P33399	275 aa	Known RBP	4.9	□□□□□ -1.62
PHO8	YDR481C	SEF1	P34228	1148 aa		4.9	□□□□□ -1.62
PHO8	YDR481C	ZTA1	P38230	334 aa	Known RBP	4.9	□□□□□ -1.62
PHO8	YDR481C	PZF1	P39933	429 aa		4.9	□□□□□ -1.62
PHO8	YDR481C	YEL020C	P39994	560 aa		4.9	□□□□□ -1.62
PHO8	YDR481C	TPA1	P40032	644 aa	Known RBP	4.9	□□□□□ -1.62
PHO8	YDR481C	AAD10	P47182	288 aa		4.9	□□□□□ -1.62
PHO8	YDR481C	TOM22	P49334	152 aa		4.9	□□□□□ -1.62
PHO8	YDR481C	ARI1	P53111	347 aa	Known RBP	4.9	□□□□□ -1.62
PHO8	YDR481C	RNH70	P53331	553 aa		4.9	□□□□□ -1.62
PHO8	YDR481C	IGO1	P53897	168 aa		4.9	□□□□□ -1.62
PHO8	YDR481C	UGO1	Q03327	502 aa		4.9	□□□□□ -1.62
PHO8	YDR481C	SPC2	Q04969	178 aa		4.9	□□□□□ -1.62
PHO8	YDR481C	YOR376W	Q08900	122 aa		4.9	□□□□□ -1.62
PHO8	YDR481C	YBR056W-A	I2HB52	66 aa		4.89	□□□□□ -1.63
PHO8	YDR481C	RAD7	P06779	565 aa		4.89	□□□□□ -1.63
PHO8	YDR481C	RPL20A	P0CX23	172 aa	Known RBP	4.89	□□□□□ -1.63
PHO8	YDR481C	RPL20B	P0CX24	172 aa	Predicted RBP	4.89	□□□□□ -1.63
PHO8	YDR481C	RPS1B	P23248	255 aa	Known RBP	4.89	□□□□□ -1.63
PHO8	YDR481C	PEX3	P28795	441 aa		4.89	□□□□□ -1.63
PHO8	YDR481C	TFC1	P32367	649 aa		4.89	□□□□□ -1.63
PHO8	YDR481C	SEA4	P38164	1038 aa		4.89	□□□□□ -1.63
PHO8	YDR481C	TSL1	P38427	1098 aa	Known RBP	4.89	□□□□□ -1.63
PHO8	YDR481C	FAA2	P39518	744 aa		4.89	□□□□□ -1.63
PHO8	YDR481C	ECM10	P39987	644 aa		4.89	□□□□□ -1.63
PHO8	YDR481C	SER3	P40054	469 aa		4.89	□□□□□ -1.63
PHO8	YDR481C	JEM1	P40358	645 aa		4.89	□□□□□ -1.63
PHO8	YDR481C	MDV1	P47025	714 aa		4.89	□□□□□ -1.63
PHO8	YDR481C	NOP9	P47077	666 aa	Known RBP	4.89	□□□□□ -1.63
PHO8	YDR481C	SUR7	P54003	302 aa		4.89	□□□□□ -1.63
PHO8	YDR481C	NUP53	Q03790	475 aa		4.89	□□□□□ -1.63
PHO8	YDR481C	YKU80	Q04437	629 aa		4.89	□□□□□ -1.63
PHO8	YDR481C	DCI1	Q08558	271 aa		4.89	□□□□□ -1.63
PHO8	YDR481C	ULA1	Q12059	462 aa		4.89	□□□□□ -1.63
PHO8	YDR481C	PAR32	Q12515	295 aa	Known RBP	4.89	□□□□□ -1.63
PHO8	YDR481C	MF(ALPHA)1	P01149	165 aa		4.89	□□□□□ -1.63
PHO8	YDR481C	CBS1	P14066	229 aa		4.89	□□□□□ -1.63
PHO8	YDR481C	REC107	P21651	314 aa		4.89	□□□□□ -1.63
PHO8	YDR481C	YIM1	P28625	365 aa		4.89	□□□□□ -1.63
PHO8	YDR481C	DPH5	P32469	300 aa	Predicted RBP	4.89	□□□□□ -1.63
PHO8	YDR481C	TEF4	P36008	412 aa	Known RBP	4.89	□□□□□ -1.63
PHO8	YDR481C	ALG3	P38179	458 aa		4.89	□□□□□ -1.63
PHO8	YDR481C	RSP5	P39940	809 aa	Known RBP	4.89	□□□□□ -1.63
PHO8	YDR481C	NAN1	Q02931	896 aa	Known RBP	4.89	□□□□□ -1.63
PHO8	YDR481C	RAD30	Q04049	632 aa		4.89	□□□□□ -1.63
PHO8	YDR481C	NAT4	Q04751	285 aa		4.89	□□□□□ -1.63
PHO8	YDR481C	SPO77	Q06134	477 aa		4.89	□□□□□ -1.63
PHO8	YDR481C	GPI11	Q06636	219 aa		4.89	□□□□□ -1.63
PHO8	YDR481C	RRT8	Q08219	342 aa		4.89	□□□□□ -1.63
PHO8	YDR481C	THP1	Q08231	455 aa		4.89	□□□□□ -1.63
PHO8	YDR481C	PRP46	Q12417	451 aa	Predicted RBP	4.89	□□□□□ -1.63
PHO8	YDR481C	HAA1	Q12753	694 aa	Known RBP	4.89	□□□□□ -1.63
PHO8	YDR481C	THR1	P17423	357 aa	Known RBP	4.88	□□□□□ -1.63
PHO8	YDR481C	DBP3	P20447	523 aa	Known RBP	4.88	□□□□□ -1.63
PHO8	YDR481C	CMK2	P22517	447 aa		4.88	□□□□□ -1.63
PHO8	YDR481C	CTR86	P25355	563 aa		4.88	□□□□□ -1.63
PHO8	YDR481C	YCR102C	P25608	368 aa		4.88	□□□□□ -1.63
PHO8	YDR481C	YOR062C	P36025	268 aa		4.88	□□□□□ -1.63
PHO8	YDR481C	SKG1	P36169	355 aa		4.88	□□□□□ -1.63
PHO8	YDR481C	BIT61	P47041	543 aa		4.88	□□□□□ -1.63
PHO8	YDR481C	MPA43	P53583	542 aa	Predicted RBP	4.88	□□□□□ -1.63
PHO8	YDR481C	YNR068C	P53754	272 aa		4.88	□□□□□ -1.63
PHO8	YDR481C	YNL181W	P53878	407 aa		4.88	□□□□□ -1.63
PHO8	YDR481C	YLR460C	P54007	376 aa		4.88	□□□□□ -1.63
PHO8	YDR481C	RSC9	Q03124	581 aa		4.88	□□□□□ -1.63
PHO8	YDR481C	PEX12	Q04370	399 aa		4.88	□□□□□ -1.63
PHO8	YDR481C	YPS7	Q06325	596 aa		4.88	□□□□□ -1.63
PHO8	YDR481C	WTM1	Q12363	437 aa	Known RBP	4.88	□□□□□ -1.63
PHO8	YDR481C	YDL199C	Q12407	687 aa		4.88	□□□□□ -1.63
PHO8	YDR481C	PSF1	Q12488	208 aa		4.88	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 32 ms