RNA–Protein interactions for RNA: YDR299W

BFR2, Transcript of Component of the SSU and 90S preribosomes, yeast

Gene BFR2, Length 1,605 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BFR2	YDR299W	MDM30	Q05930	598 aa		0.86	□□□□□ -2.27
BFR2	YDR299W	YDL114W	Q07530	308 aa		0.86	□□□□□ -2.27
BFR2	YDR299W	SOR2	Q07786	357 aa		0.86	□□□□□ -2.27
BFR2	YDR299W	SIL1	Q08199	421 aa		0.86	□□□□□ -2.27
BFR2	YDR299W	AAD15	Q08361	143 aa		0.86	□□□□□ -2.27
BFR2	YDR299W	CUE5	Q08412	411 aa	Known RBP	0.86	□□□□□ -2.27
BFR2	YDR299W	PLP2	Q12017	286 aa		0.86	□□□□□ -2.27
BFR2	YDR299W	RRG1	Q12167	365 aa	Predicted RBP	0.86	□□□□□ -2.27
BFR2	YDR299W	YGK3	Q12222	375 aa	Predicted RBP	0.86	□□□□□ -2.27
BFR2	YDR299W	EAF3	Q12432	401 aa		0.86	□□□□□ -2.27
BFR2	YDR299W	RRD2	Q12461	358 aa		0.86	□□□□□ -2.27
BFR2	YDR299W	SRN2	Q99176	213 aa		0.86	□□□□□ -2.27
BFR2	YDR299W	AFI1	Q99222	893 aa		0.86	□□□□□ -2.27
BFR2	YDR299W	MEX67	Q99257	599 aa	Known RBP	0.86	□□□□□ -2.27
BFR2	YDR299W	PDE2	P06776	526 aa		0.85	□□□□□ -2.27
BFR2	YDR299W	DST1	P07273	309 aa		0.85	□□□□□ -2.27
BFR2	YDR299W	CHS1	P08004	1131 aa		0.85	□□□□□ -2.27
BFR2	YDR299W	NFT1	P0CE68	1218 aa		0.85	□□□□□ -2.27
BFR2	YDR299W	ARF1	P11076	181 aa	Known RBP	0.85	□□□□□ -2.27
BFR2	YDR299W	RPC53	P25441	422 aa		0.85	□□□□□ -2.27
BFR2	YDR299W	URA7	P28274	579 aa	Known RBP	0.85	□□□□□ -2.27
BFR2	YDR299W	NUP2	P32499	720 aa		0.85	□□□□□ -2.27
BFR2	YDR299W	SPT10	P35208	640 aa		0.85	□□□□□ -2.27
BFR2	YDR299W	DOA1	P36037	715 aa		0.85	□□□□□ -2.27
BFR2	YDR299W	BMT2	P38278	337 aa		0.85	□□□□□ -2.27
BFR2	YDR299W	MSG5	P38590	489 aa		0.85	□□□□□ -2.27
BFR2	YDR299W	AIM10	P39965	576 aa	Known RBP	0.85	□□□□□ -2.27
BFR2	YDR299W	MMF1	P40185	145 aa	Known RBP	0.85	□□□□□ -2.27
BFR2	YDR299W	UTP18	P40362	594 aa	Predicted RBP	0.85	□□□□□ -2.27
BFR2	YDR299W	MST27	P53176	234 aa		0.85	□□□□□ -2.27
BFR2	YDR299W	RRP46	P53256	223 aa	Predicted RBP	0.85	□□□□□ -2.27
BFR2	YDR299W	YGR111W	P53265	400 aa		0.85	□□□□□ -2.27
BFR2	YDR299W	MTM1	P53320	366 aa		0.85	□□□□□ -2.27
BFR2	YDR299W	MKC7	P53379	596 aa		0.85	□□□□□ -2.27
BFR2	YDR299W	TRM112	P53738	135 aa	Predicted RBP	0.85	□□□□□ -2.27
BFR2	YDR299W	HXT11	P54862	567 aa		0.85	□□□□□ -2.27
BFR2	YDR299W	ADA2	Q02336	434 aa		0.85	□□□□□ -2.27
BFR2	YDR299W	VHS1	Q03785	461 aa		0.85	□□□□□ -2.27
BFR2	YDR299W	YMR155W	Q03795	547 aa		0.85	□□□□□ -2.27
BFR2	YDR299W	RPC11	Q04307	110 aa	Predicted RBP	0.85	□□□□□ -2.27
BFR2	YDR299W	ERB1	Q04660	807 aa	Known RBP	0.85	□□□□□ -2.27
BFR2	YDR299W	AIM32	Q04689	311 aa		0.85	□□□□□ -2.27
BFR2	YDR299W	RTN1	Q04947	295 aa	Known RBP	0.85	□□□□□ -2.27
BFR2	YDR299W	YDR341C	Q05506	607 aa	Known RBP	0.85	□□□□□ -2.27
BFR2	YDR299W	YLR345W	Q06137	509 aa		0.85	□□□□□ -2.27
BFR2	YDR299W	RIF2	Q06208	395 aa		0.85	□□□□□ -2.27
BFR2	YDR299W	VPS54	Q12071	889 aa		0.85	□□□□□ -2.27
BFR2	YDR299W	LDB17	Q12342	491 aa		0.85	□□□□□ -2.27
BFR2	YDR299W	PCL9	Q12477	304 aa		0.85	□□□□□ -2.27
BFR2	YDR299W	PSK1	P31374	1356 aa		0.84	□□□□□ -2.27
BFR2	YDR299W	RPL6B	P05739	176 aa	Known RBP	0.84	□□□□□ -2.28
BFR2	YDR299W	CDC21	P06785	304 aa		0.84	□□□□□ -2.28
BFR2	YDR299W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	0.84	□□□□□ -2.28	not detected
BFR2	YDR299W	MRPL8	P22353	238 aa		0.84	□□□□□ -2.28
BFR2	YDR299W	SLM5	P25345	492 aa	Known RBP	0.84	□□□□□ -2.28
BFR2	YDR299W	YEF1	P32622	495 aa		0.84	□□□□□ -2.28
BFR2	YDR299W	ASC1	P38011	319 aa	Known RBP	0.84	□□□□□ -2.28
BFR2	YDR299W	MRPS9	P38120	278 aa		0.84	□□□□□ -2.28
BFR2	YDR299W	INM1	P38710	295 aa		0.84	□□□□□ -2.28
BFR2	YDR299W	STN1	P38960	494 aa		0.84	□□□□□ -2.28
BFR2	YDR299W	TOS3	P43637	560 aa		0.84	□□□□□ -2.28
BFR2	YDR299W	AIM24	P47127	394 aa		0.84	□□□□□ -2.28
BFR2	YDR299W	MRM2	P53123	320 aa		0.84	□□□□□ -2.28
BFR2	YDR299W	YGR117C	P53270	476 aa		0.84	□□□□□ -2.28
BFR2	YDR299W	KTR6	P54070	446 aa		0.84	□□□□□ -2.28
BFR2	YDR299W	RPL6A	Q02326	176 aa	Known RBP	0.84	□□□□□ -2.28
BFR2	YDR299W	CCE1	Q03702	353 aa		0.84	□□□□□ -2.28
BFR2	YDR299W	ARX1	Q03862	593 aa	Known RBP	0.84	□□□□□ -2.28
BFR2	YDR299W	ECM11	Q04110	302 aa		0.84	□□□□□ -2.28
BFR2	YDR299W	TSA2	Q04120	196 aa		0.84	□□□□□ -2.28
BFR2	YDR299W	MMR1	Q06324	491 aa		0.84	□□□□□ -2.28
BFR2	YDR299W	NDL1	Q06568	189 aa		0.84	□□□□□ -2.28
BFR2	YDR299W	DCI1	Q08558	271 aa		0.84	□□□□□ -2.28
BFR2	YDR299W	NCA2	Q12374	616 aa		0.84	□□□□□ -2.28
BFR2	YDR299W	YOL159C-A	Q3E769	90 aa		0.84	□□□□□ -2.28
BFR2	YDR299W	POM152	P39685	1337 aa		0.84	□□□□□ -2.28
BFR2	YDR299W	ILV5	P06168	395 aa	Known RBP	0.83	□□□□□ -2.28
BFR2	YDR299W	LDS1	P31379	325 aa		0.83	□□□□□ -2.28
BFR2	YDR299W	RIM1	P32445	135 aa	Known RBP	0.83	□□□□□ -2.28
BFR2	YDR299W	PHA2	P32452	334 aa		0.83	□□□□□ -2.28
BFR2	YDR299W	DPH2	P32461	534 aa		0.83	□□□□□ -2.28
BFR2	YDR299W	EFB1	P32471	206 aa	Known RBP	0.83	□□□□□ -2.28
BFR2	YDR299W	MCR1	P36060	302 aa	Known RBP	0.83	□□□□□ -2.28
BFR2	YDR299W	GPI18	P38211	433 aa		0.83	□□□□□ -2.28
BFR2	YDR299W	KAP104	P38217	918 aa	Known RBP	0.83	□□□□□ -2.28
BFR2	YDR299W	ZTA1	P38230	334 aa	Known RBP	0.83	□□□□□ -2.28
BFR2	YDR299W	RTC2	P38279	296 aa		0.83	□□□□□ -2.28
BFR2	YDR299W	OM14	P38325	134 aa		0.83	□□□□□ -2.28
BFR2	YDR299W	KEL1	P38853	1164 aa	Known RBP	0.83	□□□□□ -2.28
BFR2	YDR299W	YER079W	P40052	210 aa	Known RBP	0.83	□□□□□ -2.28
BFR2	YDR299W	YER186C	P40101	306 aa		0.83	□□□□□ -2.28
BFR2	YDR299W	YNL208W	P40159	199 aa	Known RBP	0.83	□□□□□ -2.28
BFR2	YDR299W	YJL055W	P47044	245 aa		0.83	□□□□□ -2.28
BFR2	YDR299W	BIR1	P47134	954 aa		0.83	□□□□□ -2.28
BFR2	YDR299W	TCB2	P48231	1178 aa		0.83	□□□□□ -2.28
BFR2	YDR299W	ASN2	P49090	572 aa	Known RBP	0.83	□□□□□ -2.28
BFR2	YDR299W	MPS2	P53159	387 aa		0.83	□□□□□ -2.28
BFR2	YDR299W	PIB2	P53191	635 aa		0.83	□□□□□ -2.28
BFR2	YDR299W	VHT1	P53241	593 aa		0.83	□□□□□ -2.28
BFR2	YDR299W	RTT102	P53330	157 aa		0.83	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms