RNA–Protein interactions for RNA: YDR088C

SLU7, Transcript of RNA splicing factor, yeast

Gene SLU7, Length 1,149 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLU7	YDR088C	PDE2	P06776	526 aa		2.79	□□□□□ -1.96
SLU7	YDR088C	DAL2	P25335	343 aa		2.79	□□□□□ -1.96
SLU7	YDR088C	PHO91	P27514	894 aa		2.79	□□□□□ -1.96
SLU7	YDR088C	HSP104	P31539	908 aa	Known RBP	2.79	□□□□□ -1.96
SLU7	YDR088C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	2.79	□□□□□ -1.96	not detected
SLU7	YDR088C	MNS1	P32906	549 aa		2.79	□□□□□ -1.96
SLU7	YDR088C	PEX5	P35056	612 aa		2.79	□□□□□ -1.96
SLU7	YDR088C	PMT5	P52867	743 aa		2.79	□□□□□ -1.96
SLU7	YDR088C	YGL242C	P53066	181 aa		2.79	□□□□□ -1.96
SLU7	YDR088C	COS1	P53822	381 aa		2.79	□□□□□ -1.96
SLU7	YDR088C	NUP116	Q02630	1113 aa		2.79	□□□□□ -1.96
SLU7	YDR088C	CCE1	Q03702	353 aa		2.79	□□□□□ -1.96
SLU7	YDR088C	RRG7	Q08774	242 aa	Predicted RBP	2.79	□□□□□ -1.96
SLU7	YDR088C	FDH1	Q08911	376 aa		2.79	□□□□□ -1.96
SLU7	YDR088C	RUP1	Q12242	671 aa		2.79	□□□□□ -1.96
SLU7	YDR088C	RNH203	Q12338	110 aa		2.79	□□□□□ -1.96
SLU7	YDR088C	NCA2	Q12374	616 aa		2.79	□□□□□ -1.96
SLU7	YDR088C	CAP2	P13517	287 aa		2.78	□□□□□ -1.96
SLU7	YDR088C	EXG1	P23776	448 aa	Known RBP	2.78	□□□□□ -1.96
SLU7	YDR088C	PHA2	P32452	334 aa		2.78	□□□□□ -1.96
SLU7	YDR088C	YSC83	P32792	385 aa		2.78	□□□□□ -1.96
SLU7	YDR088C	MDL1	P33310	695 aa		2.78	□□□□□ -1.96
SLU7	YDR088C	SKN1	P33336	771 aa		2.78	□□□□□ -1.96
SLU7	YDR088C	PFF1	P38244	976 aa		2.78	□□□□□ -1.96
SLU7	YDR088C	YHR131C	P38835	850 aa		2.78	□□□□□ -1.96
SLU7	YDR088C	MLH1	P38920	769 aa		2.78	□□□□□ -1.96
SLU7	YDR088C	GDI1	P39958	451 aa	Known RBP	2.78	□□□□□ -1.96
SLU7	YDR088C	MMF1	P40185	145 aa	Known RBP	2.78	□□□□□ -1.96
SLU7	YDR088C	TOS3	P43637	560 aa		2.78	□□□□□ -1.96
SLU7	YDR088C	YJR085C	P47131	105 aa	Known RBP	2.78	□□□□□ -1.96
SLU7	YDR088C	BRO1	P48582	844 aa		2.78	□□□□□ -1.96
SLU7	YDR088C	SXM1	Q04175	944 aa	Known RBP	2.78	□□□□□ -1.96
SLU7	YDR088C	RBD2	Q12270	262 aa		2.78	□□□□□ -1.96
SLU7	YDR088C	DPH2	P32461	534 aa		2.77	□□□□□ -1.97
SLU7	YDR088C	DPH5	P32469	300 aa	Predicted RBP	2.77	□□□□□ -1.97
SLU7	YDR088C	YEL045C	P32616	141 aa		2.77	□□□□□ -1.97
SLU7	YDR088C	CSE2	P33308	149 aa		2.77	□□□□□ -1.97
SLU7	YDR088C	ATP3	P38077	311 aa	Known RBP	2.77	□□□□□ -1.97
SLU7	YDR088C	JEM1	P40358	645 aa		2.77	□□□□□ -1.97
SLU7	YDR088C	SEC28	P40509	296 aa	Known RBP	2.77	□□□□□ -1.97
SLU7	YDR088C	BTN2	P53286	410 aa		2.77	□□□□□ -1.97
SLU7	YDR088C	VPS9	P54787	451 aa		2.77	□□□□□ -1.97
SLU7	YDR088C	ECM7	Q06200	448 aa		2.77	□□□□□ -1.97
SLU7	YDR088C	NDL1	Q06568	189 aa		2.77	□□□□□ -1.97
SLU7	YDR088C	SSC1	P0CS90	654 aa	Known RBP	2.76	□□□□□ -1.97
SLU7	YDR088C	RRP1	P35178	278 aa	Predicted RBP	2.76	□□□□□ -1.97
SLU7	YDR088C	MNL1	P38888	796 aa		2.76	□□□□□ -1.97
SLU7	YDR088C	YIL029C	P40538	142 aa		2.76	□□□□□ -1.97
SLU7	YDR088C	MDE1	P47095	244 aa		2.76	□□□□□ -1.97
SLU7	YDR088C	MRM2	P53123	320 aa		2.76	□□□□□ -1.97
SLU7	YDR088C	YDR541C	Q03049	344 aa		2.76	□□□□□ -1.97
SLU7	YDR088C	ERO1	Q03103	563 aa		2.76	□□□□□ -1.97
SLU7	YDR088C	MDM36	Q06820	579 aa		2.76	□□□□□ -1.97
SLU7	YDR088C	NSE1	Q07913	336 aa		2.76	□□□□□ -1.97
SLU7	YDR088C	TMC1	Q08422	150 aa	Predicted RBP	2.76	□□□□□ -1.97
SLU7	YDR088C	NAM2	P11325	894 aa		2.75	□□□□□ -1.97
SLU7	YDR088C	RXT2	P38255	430 aa		2.75	□□□□□ -1.97
SLU7	YDR088C	COX14	P39103	70 aa		2.75	□□□□□ -1.97
SLU7	YDR088C	PRE5	P40302	234 aa	Known RBP	2.75	□□□□□ -1.97
SLU7	YDR088C	LCB3	P47013	409 aa		2.75	□□□□□ -1.97
SLU7	YDR088C	STE24	P47154	453 aa		2.75	□□□□□ -1.97
SLU7	YDR088C	YIP5	P53108	310 aa		2.75	□□□□□ -1.97
SLU7	YDR088C	PEX25	Q02969	394 aa		2.75	□□□□□ -1.97
SLU7	YDR088C	CUE5	Q08412	411 aa	Known RBP	2.75	□□□□□ -1.97
SLU7	YDR088C	POM152	P39685	1337 aa		2.74	□□□□□ -1.97
SLU7	YDR088C	SUP35	P05453	685 aa	Known RBP	2.74	□□□□□ -1.97
SLU7	YDR088C	ATP1	P07251	545 aa	Known RBP	2.74	□□□□□ -1.97
SLU7	YDR088C	RPL12A	P0CX53	165 aa	Known RBP	2.74	□□□□□ -1.97
SLU7	YDR088C	RPL12B	P0CX54	165 aa		2.74	□□□□□ -1.97
SLU7	YDR088C	NAT1	P12945	854 aa	Known RBP	2.74	□□□□□ -1.97
SLU7	YDR088C	RVS161	P25343	265 aa	Known RBP	2.74	□□□□□ -1.97
SLU7	YDR088C	SLM5	P25345	492 aa	Known RBP	2.74	□□□□□ -1.97
SLU7	YDR088C	PUP2	P32379	260 aa		2.74	□□□□□ -1.97
SLU7	YDR088C	YEF1	P32622	495 aa		2.74	□□□□□ -1.97
SLU7	YDR088C	MRPL10	P36520	322 aa		2.74	□□□□□ -1.97
SLU7	YDR088C	YHR177W	P38867	453 aa		2.74	□□□□□ -1.97
SLU7	YDR088C	PAC11	P40960	533 aa		2.74	□□□□□ -1.97
SLU7	YDR088C	TIS11	P47977	285 aa		2.74	□□□□□ -1.97
SLU7	YDR088C	RRP46	P53256	223 aa	Predicted RBP	2.74	□□□□□ -1.97
SLU7	YDR088C	URC2	Q04411	772 aa		2.74	□□□□□ -1.97
SLU7	YDR088C	MHR1	Q06630	226 aa		2.74	□□□□□ -1.97
SLU7	YDR088C	ASA1	Q06822	443 aa		2.74	□□□□□ -1.97
SLU7	YDR088C	TOA2	P32774	122 aa		2.73	□□□□□ -1.97
SLU7	YDR088C	COX13	P32799	129 aa		2.73	□□□□□ -1.97
SLU7	YDR088C	SPP381	P38282	291 aa	Predicted RBP	2.73	□□□□□ -1.97
SLU7	YDR088C	YHK8	P38776	514 aa		2.73	□□□□□ -1.97
SLU7	YDR088C	YGR117C	P53270	476 aa		2.73	□□□□□ -1.97
SLU7	YDR088C	RRN9	P53437	365 aa		2.73	□□□□□ -1.97
SLU7	YDR088C	TDA1	Q03533	586 aa		2.73	□□□□□ -1.97
SLU7	YDR088C	NOP6	Q07623	225 aa	Known RBP	2.73	□□□□□ -1.97
SLU7	YDR088C	IRC25	Q07951	179 aa		2.73	□□□□□ -1.97
SLU7	YDR088C	IZH2	Q12442	317 aa		2.73	□□□□□ -1.97
SLU7	YDR088C	CEX1	Q12453	761 aa		2.73	□□□□□ -1.97
SLU7	YDR088C	HSP82	P02829	709 aa	Known RBP	2.72	□□□□□ -1.97
SLU7	YDR088C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	2.72	□□□□□ -1.97	not detected
SLU7	YDR088C	TPK3	P05986	398 aa		2.72	□□□□□ -1.97
SLU7	YDR088C	HXT1	P32465	570 aa		2.72	□□□□□ -1.97
SLU7	YDR088C	SPR1	P32603	445 aa		2.72	□□□□□ -1.97
SLU7	YDR088C	GPX2	P38143	162 aa		2.72	□□□□□ -1.97
SLU7	YDR088C	YSW1	P38280	609 aa		2.72	□□□□□ -1.97

Retrieved 100 of 5,963 RNA–protein pairs in 63.4 ms