RNA–Protein interactions for RNA: YDR077W

SED1, Transcript of Major stress-induced structural GPI-cell wall glycoprotein, yeastyeast

Gene SED1, Length 1,017 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED1YDR077W SSZ1P38788 538 aaKnown RBP8.97□□□□□ -0.97
SED1YDR077W BIG1P38813 335 aa8.97□□□□□ -0.97
SED1YDR077W EGD2P38879 174 aaKnown RBP8.97□□□□□ -0.97
SED1YDR077W YGR079WP53249 370 aa8.97□□□□□ -0.97
SED1YDR077W DAM1P53267 343 aa8.97□□□□□ -0.97
SED1YDR077W FHN1P53279 174 aa8.97□□□□□ -0.97
SED1YDR077W SUN4P53616 420 aa8.97□□□□□ -0.97
SED1YDR077W RSC9Q03124 581 aa8.97□□□□□ -0.97
SED1YDR077W RIM13Q03792 727 aa8.97□□□□□ -0.97
SED1YDR077W KRE28Q04431 385 aa8.97□□□□□ -0.97
SED1YDR077W YMR310CQ04867 317 aaPredicted RBP8.97□□□□□ -0.97
SED1YDR077W ARO10Q06408 635 aa8.97□□□□□ -0.97
SED1YDR077W YTM1Q12024 460 aaPredicted RBP8.97□□□□□ -0.97
SED1YDR077W TPK3P05986 398 aa8.96□□□□□ -0.98
SED1YDR077W RNQ1P25367 405 aa8.96□□□□□ -0.98
SED1YDR077W RPL5P26321 297 aaKnown RBP8.96□□□□□ -0.98
SED1YDR077W YIM1P28625 365 aa8.96□□□□□ -0.98
SED1YDR077W MNL1P38888 796 aa8.96□□□□□ -0.98
SED1YDR077W SPO73P40031 143 aa8.96□□□□□ -0.98
SED1YDR077W RPL10P41805 221 aaKnown RBP8.96□□□□□ -0.98
SED1YDR077W MON1P53129 644 aa8.96□□□□□ -0.98
SED1YDR077W PRM8P53174 237 aa8.96□□□□□ -0.98
SED1YDR077W CSL4P53859 292 aaPredicted RBP8.96□□□□□ -0.98
SED1YDR077W COG5P53951 403 aa8.96□□□□□ -0.98
SED1YDR077W RSN1Q03516 953 aa8.96□□□□□ -0.98
SED1YDR077W SMP3Q04174 516 aa8.96□□□□□ -0.98
SED1YDR077W DCI1Q08558 271 aa8.96□□□□□ -0.98
SED1YDR077W MMT2Q08970 484 aa8.96□□□□□ -0.98
SED1YDR077W URE2P23202 354 aaKnown RBP8.95□□□□□ -0.98
SED1YDR077W HOG1P32485 435 aa8.95□□□□□ -0.98
SED1YDR077W PRP21P32524 280 aaPredicted RBP8.95□□□□□ -0.98
SED1YDR077W TUL1P36096 758 aa8.95□□□□□ -0.98
SED1YDR077W SIC1P38634 284 aa8.95□□□□□ -0.98
SED1YDR077W GOS1P38736 223 aa8.95□□□□□ -0.98
SED1YDR077W APE4P38821 490 aa8.95□□□□□ -0.98
SED1YDR077W COG3P40094 801 aa8.95□□□□□ -0.98
SED1YDR077W CAK1P43568 368 aaPredicted RBP8.95□□□□□ -0.98
SED1YDR077W UBC9P50623 157 aaPredicted RBP8.95□□□□□ -0.98
SED1YDR077W TWF1P53250 332 aa8.95□□□□□ -0.98
SED1YDR077W YDL129WQ07555 291 aa8.95□□□□□ -0.98
SED1YDR077W SKS1Q12505 502 aa8.95□□□□□ -0.98
SED1YDR077W TRM1P15565 570 aaKnown RBP8.94□□□□□ -0.98
SED1YDR077W RPB5P20434 215 aa8.94□□□□□ -0.98
SED1YDR077W SLY41P22215 453 aa8.94□□□□□ -0.98
SED1YDR077W RHB1P25378 209 aa8.94□□□□□ -0.98
SED1YDR077W RCY1P39531 840 aa8.94□□□□□ -0.98
SED1YDR077W LTP1P40347 161 aa8.94□□□□□ -0.98
SED1YDR077W FET5P43561 622 aa8.94□□□□□ -0.98
SED1YDR077W RPS12P48589 143 aaKnown RBP8.94□□□□□ -0.98
SED1YDR077W SLD3P53135 668 aa8.94□□□□□ -0.98
SED1YDR077W TLG1Q03322 224 aa8.94□□□□□ -0.98
SED1YDR077W BNA5Q05979 453 aa8.94□□□□□ -0.98
SED1YDR077W ISR1Q06098 443 aaKnown RBP8.94□□□□□ -0.98
SED1YDR077W FDH1Q08911 376 aa8.94□□□□□ -0.98
SED1YDR077W MED11Q99278 115 aa8.94□□□□□ -0.98
SED1YDR077W PET9P18239 318 aaKnown RBP8.93□□□□□ -0.98
SED1YDR077W RPS5P26783 225 aaKnown RBP8.93□□□□□ -0.98
SED1YDR077W GSH1P32477 678 aa8.93□□□□□ -0.98
SED1YDR077W RPN2P32565 945 aaKnown RBP8.93□□□□□ -0.98
SED1YDR077W YLF2P38746 405 aa8.93□□□□□ -0.98
SED1YDR077W PRP39P39682 629 aaKnown RBP8.93□□□□□ -0.98
SED1YDR077W IES5P40060 125 aa8.93□□□□□ -0.98
SED1YDR077W MET28P40573 187 aa8.93□□□□□ -0.98
SED1YDR077W STE24P47154 453 aa8.93□□□□□ -0.98
SED1YDR077W HOS2P53096 452 aaPredicted RBP8.93□□□□□ -0.98
SED1YDR077W CDH1P53197 566 aa8.93□□□□□ -0.98
SED1YDR077W SED5Q01590 340 aa8.93□□□□□ -0.98
SED1YDR077W ELP4Q02884 456 aaKnown RBP8.93□□□□□ -0.98
SED1YDR077W YEH1Q07804 573 aa8.93□□□□□ -0.98
SED1YDR077W RTK1Q12100 620 aaPredicted RBP8.93□□□□□ -0.98
SED1YDR077W BSC1Q12140 328 aa8.93□□□□□ -0.98
SED1YDR077W YLR126CQ12288 251 aa8.93□□□□□ -0.98
SED1YDR077W VCX1Q99385 411 aa8.93□□□□□ -0.98
SED1YDR077W PRP2P20095 876 aaPredicted RBP8.92□□□□□ -0.98
SED1YDR077W RRP7P25368 297 aaPredicted RBP8.92□□□□□ -0.98
SED1YDR077W CWP1P28319 239 aa8.92□□□□□ -0.98
SED1YDR077W IDH1P28834 360 aaKnown RBP RIP-Chip data8.92□□□□□ -0.98not detected
SED1YDR077W VMA6P32366 345 aaKnown RBP8.92□□□□□ -0.98
SED1YDR077W ASF2P32448 525 aaPredicted RBP8.92□□□□□ -0.98
SED1YDR077W CDC12P32468 407 aaKnown RBP8.92□□□□□ -0.98
SED1YDR077W NRP1P32770 719 aaKnown RBP RIP-Chip data8.92□□□□□ -0.98not detected
SED1YDR077W YPS6P40583 537 aa8.92□□□□□ -0.98
SED1YDR077W BIT61P47041 543 aa8.92□□□□□ -0.98
SED1YDR077W IBA57P47158 497 aa8.92□□□□□ -0.98
SED1YDR077W YGR168CP53293 376 aa8.92□□□□□ -0.98
SED1YDR077W ATF2P53296 535 aa8.92□□□□□ -0.98
SED1YDR077W YDR179W-AQ03983 463 aa8.92□□□□□ -0.98
SED1YDR077W STP3Q05937 343 aa8.92□□□□□ -0.98
SED1YDR077W NFI1Q12216 726 aa8.92□□□□□ -0.98
SED1YDR077W YOR019WQ99248 730 aa8.92□□□□□ -0.98
SED1YDR077W SEC2P17065 759 aa8.91□□□□□ -0.98
SED1YDR077W HOP1P20050 605 aa8.91□□□□□ -0.98
SED1YDR077W YMC1P32331 307 aa8.91□□□□□ -0.98
SED1YDR077W MSN2P33748 704 aa8.91□□□□□ -0.98
SED1YDR077W AHP1P38013 176 aaKnown RBP8.91□□□□□ -0.98
SED1YDR077W PRE6P40303 254 aaKnown RBP8.91□□□□□ -0.98
SED1YDR077W TED1P40533 473 aa8.91□□□□□ -0.98
SED1YDR077W SNM1P40993 198 aa8.91□□□□□ -0.98
SED1YDR077W AAD10P47182 288 aa8.91□□□□□ -0.98
SED1YDR077W RBL2P48606 106 aaKnown RBP8.91□□□□□ -0.98
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms