RNA–Protein interactions for RNA: YDL122W

UBP1, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP1, Length 2,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP1YDL122W AUR1P36107 401 aaPredicted RBP2.02□□□□□ -2.09
UBP1YDL122W RPF2P36160 344 aaKnown RBP2.02□□□□□ -2.09
UBP1YDL122W PIG2P40187 538 aa2.02□□□□□ -2.09
UBP1YDL122W AVT7P40501 490 aa2.02□□□□□ -2.09
UBP1YDL122W MET28P40573 187 aa2.02□□□□□ -2.09
UBP1YDL122W ROK1P45818 564 aaPredicted RBP2.02□□□□□ -2.09
UBP1YDL122W ABM1P47146 123 aa2.02□□□□□ -2.09
UBP1YDL122W TCB2P48231 1178 aa2.02□□□□□ -2.09
UBP1YDL122W YGR066CP53242 292 aa2.02□□□□□ -2.09
UBP1YDL122W JJJ1P53863 590 aa2.02□□□□□ -2.09
UBP1YDL122W ASI1P54074 624 aa2.02□□□□□ -2.09
UBP1YDL122W SLU7Q02775 382 aaKnown RBP2.02□□□□□ -2.09
UBP1YDL122W OAZ1Q02803 292 aa2.02□□□□□ -2.09
UBP1YDL122W ARR3Q06598 404 aa2.02□□□□□ -2.09
UBP1YDL122W SWT1Q12104 458 aa2.02□□□□□ -2.09
UBP1YDL122W YJR112W-AQ3E743 109 aa2.02□□□□□ -2.09
UBP1YDL122W YOR019WQ99248 730 aa2.02□□□□□ -2.09
UBP1YDL122W MDH1P17505 334 aaKnown RBP RIP-Chip data2.02□□□□□ -2.09not detected
UBP1YDL122W TYR1P20049 452 aa2.02□□□□□ -2.09
UBP1YDL122W PRP28P23394 588 aa2.02□□□□□ -2.09
UBP1YDL122W YCR061WP25639 631 aa2.02□□□□□ -2.09
UBP1YDL122W CDC15P27636 974 aa2.02□□□□□ -2.09
UBP1YDL122W ERG9P29704 444 aa2.02□□□□□ -2.09
UBP1YDL122W PUP2P32379 260 aa2.02□□□□□ -2.09
UBP1YDL122W PRY2P36110 329 aa2.02□□□□□ -2.09
UBP1YDL122W OM14P38325 134 aa2.02□□□□□ -2.09
UBP1YDL122W MNL1P38888 796 aa2.02□□□□□ -2.09
UBP1YDL122W FLO5P38894 1075 aa2.02□□□□□ -2.09
UBP1YDL122W YIL067CP40514 678 aa2.02□□□□□ -2.09
UBP1YDL122W FKH2P41813 862 aa2.02□□□□□ -2.09
UBP1YDL122W IME4P41833 600 aa2.02□□□□□ -2.09
UBP1YDL122W RFX1P48743 811 aa2.02□□□□□ -2.09
UBP1YDL122W YGR054WP53235 642 aaKnown RBP2.02□□□□□ -2.09
UBP1YDL122W VTI1Q04338 217 aa2.02□□□□□ -2.09
UBP1YDL122W YEH1Q07804 573 aa2.02□□□□□ -2.09
UBP1YDL122W NOP12Q08208 459 aaKnown RBP2.02□□□□□ -2.09
UBP1YDL122W AIM39Q08223 395 aa2.02□□□□□ -2.09
UBP1YDL122W NFI1Q12216 726 aa2.02□□□□□ -2.09
UBP1YDL122W SFG1Q12507 346 aa2.02□□□□□ -2.09
UBP1YDL122W TAD3Q9URQ3 322 aa2.02□□□□□ -2.09
UBP1YDL122W YCR051WP25631 222 aa2.01□□□□□ -2.09
UBP1YDL122W PAP1P29468 568 aaKnown RBP2.01□□□□□ -2.09
UBP1YDL122W CBR1P38626 284 aaKnown RBP2.01□□□□□ -2.09
UBP1YDL122W YHL037CP38733 133 aa2.01□□□□□ -2.09
UBP1YDL122W OTU2P38747 307 aaKnown RBP2.01□□□□□ -2.09
UBP1YDL122W PCL5P38794 229 aa2.01□□□□□ -2.09
UBP1YDL122W FRT2P39734 528 aa2.01□□□□□ -2.09
UBP1YDL122W NDC80P40460 691 aa2.01□□□□□ -2.09
UBP1YDL122W PKP1P40530 394 aa2.01□□□□□ -2.09
UBP1YDL122W YIL012WP40551 113 aa2.01□□□□□ -2.09
UBP1YDL122W NMD5P46970 1048 aa2.01□□□□□ -2.09
UBP1YDL122W MSE1P48525 536 aa2.01□□□□□ -2.09
UBP1YDL122W EOS1P53938 366 aa2.01□□□□□ -2.09
UBP1YDL122W YLR224WQ05947 369 aa2.01□□□□□ -2.09
UBP1YDL122W ATG23Q06671 453 aa2.01□□□□□ -2.09
UBP1YDL122W CHS5Q12114 671 aaKnown RBP2.01□□□□□ -2.09
UBP1YDL122W NTO1Q12311 748 aa2.01□□□□□ -2.09
UBP1YDL122W FRE6Q12473 712 aa2.01□□□□□ -2.09
UBP1YDL122W MTR10Q99189 972 aa2.01□□□□□ -2.09
UBP1YDL122W URA2P07259 2214 aaKnown RBP2.01□□□□□ -2.09
UBP1YDL122W YBR085C-AO43137 85 aa2.01□□□□□ -2.09
UBP1YDL122W REP1P03871 373 aa2.01□□□□□ -2.09
UBP1YDL122W RPI1P23250 407 aaKnown RBP2.01□□□□□ -2.09
UBP1YDL122W RRP7P25368 297 aaPredicted RBP2.01□□□□□ -2.09
UBP1YDL122W MRPS5P33759 307 aa2.01□□□□□ -2.09
UBP1YDL122W CSG2P35206 410 aa2.01□□□□□ -2.09
UBP1YDL122W LNP1P38878 278 aa2.01□□□□□ -2.09
UBP1YDL122W BAP3P41815 604 aa2.01□□□□□ -2.09
UBP1YDL122W STR3P53101 465 aaKnown RBP2.01□□□□□ -2.09
UBP1YDL122W ARP5P53946 755 aa2.01□□□□□ -2.09
UBP1YDL122W YAP6Q03935 383 aa2.01□□□□□ -2.09
UBP1YDL122W HRI1Q05905 244 aaKnown RBP2.01□□□□□ -2.09
UBP1YDL122W TMA10Q06177 86 aa2.01□□□□□ -2.09
UBP1YDL122W FRE5Q08908 694 aa2.01□□□□□ -2.09
UBP1YDL122W ATG29Q12092 213 aa2.01□□□□□ -2.09
UBP1YDL122W GPM3Q12326 303 aa2.01□□□□□ -2.09
UBP1YDL122W SPE4Q12455 300 aa2.01□□□□□ -2.09
UBP1YDL122W YGR035W-AQ45U48 73 aa2.01□□□□□ -2.09
UBP1YDL122W AFI1Q99222 893 aa2.01□□□□□ -2.09
UBP1YDL122W YPT6Q99260 215 aa2.01□□□□□ -2.09
UBP1YDL122W Q0144Q9ZZW2 109 aa2.01□□□□□ -2.09
UBP1YDL122W CYR1P08678 2026 aaKnown RBP2.01□□□□□ -2.09
UBP1YDL122W ARG4P04076 463 aaPredicted RBP2□□□□□ -2.09
UBP1YDL122W YML003WP0CF16 290 aa2□□□□□ -2.09
UBP1YDL122W GAL3P13045 520 aa2□□□□□ -2.09
UBP1YDL122W CYS4P32582 507 aaKnown RBP2□□□□□ -2.09
UBP1YDL122W SWH1P35845 1188 aa2□□□□□ -2.09
UBP1YDL122W PRP39P39682 629 aaKnown RBP2□□□□□ -2.09
UBP1YDL122W SEN34P39707 275 aa2□□□□□ -2.09
UBP1YDL122W YEL028WP39989 153 aa2□□□□□ -2.09
UBP1YDL122W YHC3P47040 408 aa2□□□□□ -2.09
UBP1YDL122W MRK1P50873 501 aa2□□□□□ -2.09
UBP1YDL122W YIP4P53093 235 aa2□□□□□ -2.09
UBP1YDL122W IBD2P53892 351 aa2□□□□□ -2.09
UBP1YDL122W YPL107WQ02873 248 aa2□□□□□ -2.09
UBP1YDL122W ENT5Q03769 411 aaKnown RBP2□□□□□ -2.09
UBP1YDL122W YDR239CQ03780 787 aa2□□□□□ -2.09
UBP1YDL122W BUD22Q04347 519 aaKnown RBP2□□□□□ -2.09
UBP1YDL122W GTB1Q04924 702 aa2□□□□□ -2.09
UBP1YDL122W VPS38Q05919 439 aa2□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms