RNA–Protein interactions for RNA: YDL036C

PUS9, Transcript of Mitochondrial tRNA:pseudouridine synthase, yeast

Gene PUS9, Length 1,389 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PUS9	YDL036C	SPH1	Q06160	661 aa		4.1	□□□□□ -1.75
PUS9	YDL036C	CEX1	Q12453	761 aa		4.1	□□□□□ -1.75
PUS9	YDL036C	HEM2	P05373	342 aa		4.09	□□□□□ -1.75
PUS9	YDL036C	STE3	P06783	470 aa		4.09	□□□□□ -1.75
PUS9	YDL036C	ARF1	P11076	181 aa	Known RBP	4.09	□□□□□ -1.75
PUS9	YDL036C	RNA14	P25298	677 aa	Known RBP	4.09	□□□□□ -1.75
PUS9	YDL036C	SPS22	P25380	463 aa		4.09	□□□□□ -1.75
PUS9	YDL036C	PSO2	P30620	661 aa		4.09	□□□□□ -1.75
PUS9	YDL036C	SRB2	P34162	210 aa		4.09	□□□□□ -1.75
PUS9	YDL036C	MDM31	P38880	579 aa		4.09	□□□□□ -1.75
PUS9	YDL036C	MKT1	P40850	830 aa	Known RBP	4.09	□□□□□ -1.75
PUS9	YDL036C	COS10	P52924	374 aa		4.09	□□□□□ -1.75
PUS9	YDL036C	MPS2	P53159	387 aa		4.09	□□□□□ -1.75
PUS9	YDL036C	RTC5	Q12108	567 aa	Known RBP	4.09	□□□□□ -1.75
PUS9	YDL036C	RRP12	Q12754	1228 aa	Known RBP	4.09	□□□□□ -1.75
PUS9	YDL036C	OPI3	P05375	206 aa		4.08	□□□□□ -1.76
PUS9	YDL036C	ATP1	P07251	545 aa	Known RBP	4.08	□□□□□ -1.76
PUS9	YDL036C	THR4	P16120	514 aa	Known RBP	4.08	□□□□□ -1.76
PUS9	YDL036C	SLY1	P22213	666 aa		4.08	□□□□□ -1.76
PUS9	YDL036C	COX13	P32799	129 aa		4.08	□□□□□ -1.76
PUS9	YDL036C	LOS1	P33418	1100 aa	Predicted RBP	4.08	□□□□□ -1.76
PUS9	YDL036C	DOA1	P36037	715 aa		4.08	□□□□□ -1.76
PUS9	YDL036C	RIB5	P38145	238 aa		4.08	□□□□□ -1.76
PUS9	YDL036C	MIX23	P38162	196 aa		4.08	□□□□□ -1.76
PUS9	YDL036C	DED81	P38707	554 aa	Known RBP	4.08	□□□□□ -1.76
PUS9	YDL036C	RRF1	P38771	230 aa		4.08	□□□□□ -1.76
PUS9	YDL036C	YHR177W	P38867	453 aa		4.08	□□□□□ -1.76
PUS9	YDL036C	PES4	P39684	611 aa		4.08	□□□□□ -1.76
PUS9	YDL036C	SFH5	P47008	294 aa		4.08	□□□□□ -1.76
PUS9	YDL036C	STE24	P47154	453 aa		4.08	□□□□□ -1.76
PUS9	YDL036C	AZR1	P50080	613 aa		4.08	□□□□□ -1.76
PUS9	YDL036C	PMT5	P52867	743 aa		4.08	□□□□□ -1.76
PUS9	YDL036C	PRO2	P54885	456 aa	Known RBP	4.08	□□□□□ -1.76
PUS9	YDL036C	PEX27	Q08580	376 aa		4.08	□□□□□ -1.76
PUS9	YDL036C	HIF1	Q12373	385 aa		4.08	□□□□□ -1.76
PUS9	YDL036C	SUR1	P33300	382 aa		4.07	□□□□□ -1.76
PUS9	YDL036C	SKT5	P34226	696 aa		4.07	□□□□□ -1.76
PUS9	YDL036C	NAT2	P37293	288 aa		4.07	□□□□□ -1.76
PUS9	YDL036C	ATM1	P40416	690 aa		4.07	□□□□□ -1.76
PUS9	YDL036C	TOS3	P43637	560 aa		4.07	□□□□□ -1.76
PUS9	YDL036C	HST1	P53685	503 aa		4.07	□□□□□ -1.76
PUS9	YDL036C	SMA2	Q04658	369 aa		4.07	□□□□□ -1.76
PUS9	YDL036C	BCH1	Q05029	724 aa		4.07	□□□□□ -1.76
PUS9	YDL036C	SAG1	P20840	650 aa		4.06	□□□□□ -1.76
PUS9	YDL036C	MCK1	P21965	375 aa	Known RBP	4.06	□□□□□ -1.76
PUS9	YDL036C	YBP1	P38315	674 aa		4.06	□□□□□ -1.76
PUS9	YDL036C	SIM1	P40472	476 aa		4.06	□□□□□ -1.76
PUS9	YDL036C	YJL213W	P40896	331 aa		4.06	□□□□□ -1.76
PUS9	YDL036C	YDL186W	P48568	277 aa		4.06	□□□□□ -1.76
PUS9	YDL036C	GPI8	P49018	411 aa		4.06	□□□□□ -1.76
PUS9	YDL036C	LDS2	Q08218	356 aa		4.06	□□□□□ -1.76
PUS9	YDL036C	SNX3	Q08826	162 aa	Known RBP	4.06	□□□□□ -1.76
PUS9	YDL036C	NCA2	Q12374	616 aa		4.06	□□□□□ -1.76
PUS9	YDL036C	RNA1	P11745	407 aa	Known RBP	4.05	□□□□□ -1.76
PUS9	YDL036C	CPR1	P14832	162 aa	Known RBP	4.05	□□□□□ -1.76
PUS9	YDL036C	YCL068C	P25593	260 aa		4.05	□□□□□ -1.76
PUS9	YDL036C	MRP4	P32902	394 aa		4.05	□□□□□ -1.76
PUS9	YDL036C	YKL097C	P34245	136 aa		4.05	□□□□□ -1.76
PUS9	YDL036C	YDR089W	P38966	869 aa		4.05	□□□□□ -1.76
PUS9	YDL036C	OST1	P41543	476 aa	Known RBP	4.05	□□□□□ -1.76
PUS9	YDL036C	YGR117C	P53270	476 aa		4.05	□□□□□ -1.76
PUS9	YDL036C	RET3	P53600	189 aa		4.05	□□□□□ -1.76
PUS9	YDL036C	MSO1	P53604	210 aa	Known RBP	4.05	□□□□□ -1.76
PUS9	YDL036C	CRZ1	P53968	678 aa		4.05	□□□□□ -1.76
PUS9	YDL036C	ASA1	Q06822	443 aa		4.05	□□□□□ -1.76
PUS9	YDL036C	RAX1	Q08760	435 aa		4.05	□□□□□ -1.76
PUS9	YDL036C	THP3	Q12049	470 aa	Known RBP	4.05	□□□□□ -1.76
PUS9	YDL036C	TPK3	P05986	398 aa		4.04	□□□□□ -1.76
PUS9	YDL036C	MAS1	P10507	462 aa		4.04	□□□□□ -1.76
PUS9	YDL036C	MSK1	P32048	576 aa		4.04	□□□□□ -1.76
PUS9	YDL036C	HMX1	P32339	317 aa		4.04	□□□□□ -1.76
PUS9	YDL036C	MTC6	P38849	526 aa		4.04	□□□□□ -1.76
PUS9	YDL036C	OSW5	P40219	148 aa		4.04	□□□□□ -1.76
PUS9	YDL036C	SNL1	P40548	159 aa		4.04	□□□□□ -1.76
PUS9	YDL036C	TOS2	P50078	622 aa		4.04	□□□□□ -1.76
PUS9	YDL036C	GOR1	P53839	350 aa		4.04	□□□□□ -1.76
PUS9	YDL036C	HXT11	P54862	567 aa		4.04	□□□□□ -1.76
PUS9	YDL036C	CCE1	Q03702	353 aa		4.04	□□□□□ -1.76
PUS9	YDL036C	YMR310C	Q04867	317 aa	Predicted RBP	4.04	□□□□□ -1.76
PUS9	YDL036C	MDY2	Q12285	212 aa		4.04	□□□□□ -1.76
PUS9	YDL036C	GDH1	P07262	454 aa	Known RBP	4.03	□□□□□ -1.76
PUS9	YDL036C	PHO2	P07269	559 aa		4.03	□□□□□ -1.76
PUS9	YDL036C	HEM15	P16622	393 aa		4.03	□□□□□ -1.76
PUS9	YDL036C	PRO3	P32263	286 aa	Known RBP	4.03	□□□□□ -1.76
PUS9	YDL036C	YEF1	P32622	495 aa		4.03	□□□□□ -1.76
PUS9	YDL036C	TOA2	P32774	122 aa		4.03	□□□□□ -1.76
PUS9	YDL036C	PTK1	P36002	662 aa	Predicted RBP	4.03	□□□□□ -1.76
PUS9	YDL036C	CHK1	P38147	527 aa		4.03	□□□□□ -1.76
PUS9	YDL036C	SPG5	P42933	373 aa		4.03	□□□□□ -1.76
PUS9	YDL036C	WSC2	P53832	503 aa		4.03	□□□□□ -1.76
PUS9	YDL036C	SPR6	Q01684	191 aa		4.03	□□□□□ -1.76
PUS9	YDL036C	YPR078C	Q06813	372 aa		4.03	□□□□□ -1.76
PUS9	YDL036C	PPT2	Q12036	173 aa		4.03	□□□□□ -1.76
PUS9	YDL036C	YOP1	Q12402	180 aa		4.03	□□□□□ -1.76
PUS9	YDL036C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.02	□□□□□ -1.77	not detected
PUS9	YDL036C	EXG1	P23776	448 aa	Known RBP	4.02	□□□□□ -1.77
PUS9	YDL036C	MUD1	P32605	298 aa	Known RBP	4.02	□□□□□ -1.77
PUS9	YDL036C	PCH2	P38126	564 aa		4.02	□□□□□ -1.77
PUS9	YDL036C	YBR137W	P38276	179 aa		4.02	□□□□□ -1.77
PUS9	YDL036C	LIN1	P38852	340 aa	Predicted RBP	4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 13 ms