RNA–Protein interactions for RNA: YCR084C

TUP1, Transcript of General repressor of transcription, yeast

Gene TUP1, Length 2,142 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TUP1	YCR084C	SAC7	P17121	654 aa		4.86	□□□□□ -1.63
TUP1	YCR084C	CWP1	P28319	239 aa		4.86	□□□□□ -1.63
TUP1	YCR084C	BEM1	P29366	551 aa		4.86	□□□□□ -1.63
TUP1	YCR084C	ISC10	P32645	267 aa		4.86	□□□□□ -1.63
TUP1	YCR084C	SCO2	P38072	301 aa		4.86	□□□□□ -1.63
TUP1	YCR084C	DTR1	P38125	572 aa		4.86	□□□□□ -1.63
TUP1	YCR084C	SBE22	P38814	852 aa		4.86	□□□□□ -1.63
TUP1	YCR084C	ATG7	P38862	630 aa		4.86	□□□□□ -1.63
TUP1	YCR084C	MLH1	P38920	769 aa		4.86	□□□□□ -1.63
TUP1	YCR084C	RPA49	Q01080	415 aa	Predicted RBP	4.86	□□□□□ -1.63
TUP1	YCR084C	FAR10	Q06001	478 aa		4.86	□□□□□ -1.63
TUP1	YCR084C	CDC73	Q06697	393 aa		4.86	□□□□□ -1.63
TUP1	YCR084C	MFG1	Q07684	458 aa		4.86	□□□□□ -1.63
TUP1	YCR084C	HRK1	Q08732	759 aa	Known RBP	4.86	□□□□□ -1.63
TUP1	YCR084C	PAA1	Q12447	191 aa	Known RBP	4.86	□□□□□ -1.63
TUP1	YCR084C	CTF3	Q12748	733 aa		4.86	□□□□□ -1.63
TUP1	YCR084C	AFI1	Q99222	893 aa		4.86	□□□□□ -1.63
TUP1	YCR084C	RPS17A	P02407	136 aa	Known RBP	4.85	□□□□□ -1.63
TUP1	YCR084C	RPP1A	P05318	106 aa	Predicted RBP	4.85	□□□□□ -1.63
TUP1	YCR084C	PUT2	P07275	575 aa		4.85	□□□□□ -1.63
TUP1	YCR084C	RPS17B	P14127	136 aa	Known RBP	4.85	□□□□□ -1.63
TUP1	YCR084C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.85	□□□□□ -1.63	not detected
TUP1	YCR084C	PEX2	P32800	271 aa		4.85	□□□□□ -1.63
TUP1	YCR084C	RPS1A	P33442	255 aa	Known RBP	4.85	□□□□□ -1.63
TUP1	YCR084C	FAD1	P38913	306 aa		4.85	□□□□□ -1.63
TUP1	YCR084C	AIM2	P39721	246 aa		4.85	□□□□□ -1.63
TUP1	YCR084C	FAR3	P46671	204 aa		4.85	□□□□□ -1.63
TUP1	YCR084C	RTT101	P47050	842 aa		4.85	□□□□□ -1.63
TUP1	YCR084C	RHO5	P53879	331 aa	Known RBP	4.85	□□□□□ -1.63
TUP1	YCR084C	YNL140C	P53910	189 aa		4.85	□□□□□ -1.63
TUP1	YCR084C	COG5	P53951	403 aa		4.85	□□□□□ -1.63
TUP1	YCR084C	MYO5	Q04439	1219 aa	Known RBP	4.85	□□□□□ -1.63
TUP1	YCR084C	NEJ1	Q06148	342 aa		4.85	□□□□□ -1.63
TUP1	YCR084C	OPT2	Q06593	877 aa		4.85	□□□□□ -1.63
TUP1	YCR084C	THI20	Q08224	551 aa		4.85	□□□□□ -1.63
TUP1	YCR084C	SLM3	Q12093	417 aa		4.85	□□□□□ -1.63
TUP1	YCR084C	YLR108C	Q12259	485 aa		4.85	□□□□□ -1.63
TUP1	YCR084C	FMP16	Q12497	93 aa		4.85	□□□□□ -1.63
TUP1	YCR084C	PET20	Q99373	253 aa		4.85	□□□□□ -1.63
TUP1	YCR084C	ATP6	P00854	259 aa		4.85	□□□□□ -1.63
TUP1	YCR084C	RPP2A	P05319	106 aa	Known RBP	4.85	□□□□□ -1.63
TUP1	YCR084C	SWI5	P08153	709 aa		4.85	□□□□□ -1.63
TUP1	YCR084C	MET2	P08465	486 aa		4.85	□□□□□ -1.63
TUP1	YCR084C	DAL2	P25335	343 aa		4.85	□□□□□ -1.63
TUP1	YCR084C	PET18	P25362	215 aa		4.85	□□□□□ -1.63
TUP1	YCR084C	MUD1	P32605	298 aa	Known RBP	4.85	□□□□□ -1.63
TUP1	YCR084C	TAF14	P35189	244 aa		4.85	□□□□□ -1.63
TUP1	YCR084C	QNS1	P38795	714 aa	Known RBP	4.85	□□□□□ -1.63
TUP1	YCR084C	SFB3	P38810	929 aa		4.85	□□□□□ -1.63
TUP1	YCR084C	YEL020C	P39994	560 aa		4.85	□□□□□ -1.63
TUP1	YCR084C	ECM27	P47144	725 aa		4.85	□□□□□ -1.63
TUP1	YCR084C	NQM1	P53228	333 aa	Predicted RBP	4.85	□□□□□ -1.63
TUP1	YCR084C	NOP19	P53317	196 aa	Predicted RBP	4.85	□□□□□ -1.63
TUP1	YCR084C	RSC9	Q03124	581 aa		4.85	□□□□□ -1.63
TUP1	YCR084C	MUS81	Q04149	632 aa	Predicted RBP	4.85	□□□□□ -1.63
TUP1	YCR084C	CSM3	Q04659	317 aa		4.85	□□□□□ -1.63
TUP1	YCR084C	YPR127W	Q06494	345 aa		4.85	□□□□□ -1.63
TUP1	YCR084C	FYV7	Q12247	151 aa		4.85	□□□□□ -1.63
TUP1	YCR084C	TFB5	Q3E7C1	72 aa	Predicted RBP	4.85	□□□□□ -1.63
TUP1	YCR084C	RHO1	P06780	209 aa	Known RBP	4.84	□□□□□ -1.63
TUP1	YCR084C	BET2	P20133	325 aa		4.84	□□□□□ -1.63
TUP1	YCR084C	RIT1	P23796	513 aa		4.84	□□□□□ -1.63
TUP1	YCR084C	PRP21	P32524	280 aa	Predicted RBP	4.84	□□□□□ -1.63
TUP1	YCR084C	UGP1	P32861	499 aa	Known RBP	4.84	□□□□□ -1.63
TUP1	YCR084C	SEF1	P34228	1148 aa		4.84	□□□□□ -1.63
TUP1	YCR084C	SNU114	P36048	1008 aa	Known RBP	4.84	□□□□□ -1.63
TUP1	YCR084C	TUL1	P36096	758 aa		4.84	□□□□□ -1.63
TUP1	YCR084C	APT2	P36973	181 aa		4.84	□□□□□ -1.63
TUP1	YCR084C	CST26	P38226	397 aa		4.84	□□□□□ -1.63
TUP1	YCR084C	EXO5	P38289	585 aa		4.84	□□□□□ -1.63
TUP1	YCR084C	ACO2	P39533	789 aa		4.84	□□□□□ -1.63
TUP1	YCR084C	RRD1	P40454	393 aa	Known RBP	4.84	□□□□□ -1.63
TUP1	YCR084C	VNX1	P42839	908 aa		4.84	□□□□□ -1.63
TUP1	YCR084C	CAK1	P43568	368 aa	Predicted RBP	4.84	□□□□□ -1.63
TUP1	YCR084C	YAR1	P46683	200 aa		4.84	□□□□□ -1.63
TUP1	YCR084C	RIB4	P50861	169 aa	Predicted RBP	4.84	□□□□□ -1.63
TUP1	YCR084C	YGR111W	P53265	400 aa		4.84	□□□□□ -1.63
TUP1	YCR084C	SOL4	P53315	255 aa		4.84	□□□□□ -1.63
TUP1	YCR084C	SKO1	Q02100	647 aa		4.84	□□□□□ -1.63
TUP1	YCR084C	PPN1	Q04119	674 aa		4.84	□□□□□ -1.63
TUP1	YCR084C	IWR1	Q07532	353 aa	Predicted RBP	4.84	□□□□□ -1.63
TUP1	YCR084C	CRT10	Q08226	957 aa		4.84	□□□□□ -1.63
TUP1	YCR084C	AAD15	Q08361	143 aa		4.84	□□□□□ -1.63
TUP1	YCR084C	GLO4	Q12320	285 aa		4.84	□□□□□ -1.63
TUP1	YCR084C	NDJ1	Q12366	352 aa		4.84	□□□□□ -1.63
TUP1	YCR084C	RPS21B	Q3E754	87 aa	Known RBP	4.84	□□□□□ -1.63
TUP1	YCR084C	YBL029C-A	Q3E756	94 aa		4.84	□□□□□ -1.63
TUP1	YCR084C	PRC1	P00729	532 aa		4.84	□□□□□ -1.64
TUP1	YCR084C	ADE5,7	P07244	802 aa	Known RBP	4.84	□□□□□ -1.64
TUP1	YCR084C	SEC53	P07283	254 aa	Known RBP	4.84	□□□□□ -1.64
TUP1	YCR084C	TRP4	P07285	380 aa	Predicted RBP	4.84	□□□□□ -1.64
TUP1	YCR084C	YGL041W-A	P0C5N3	154 aa		4.84	□□□□□ -1.64
TUP1	YCR084C	MRPL33	P20084	86 aa		4.84	□□□□□ -1.64
TUP1	YCR084C	SAR1	P20606	190 aa	Known RBP	4.84	□□□□□ -1.64
TUP1	YCR084C	YCK1	P23291	538 aa		4.84	□□□□□ -1.64
TUP1	YCR084C	GSP1	P32835	219 aa	Known RBP	4.84	□□□□□ -1.64
TUP1	YCR084C	GSP2	P32836	220 aa	Known RBP	4.84	□□□□□ -1.64
TUP1	YCR084C	SOF1	P33750	489 aa	Known RBP	4.84	□□□□□ -1.64
TUP1	YCR084C	RIB1	P38066	345 aa		4.84	□□□□□ -1.64
TUP1	YCR084C	ARA1	P38115	344 aa		4.84	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 101.1 ms