RNA–Protein interactions for RNA: YBR236C

ABD1, Transcript of Methyltransferase, yeast

Gene ABD1, Length 1,311 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ABD1	YBR236C	YMR181C	Q03231	154 aa		4.21	□□□□□ -1.74
ABD1	YBR236C	YLR456W	Q06199	204 aa		4.21	□□□□□ -1.74
ABD1	YBR236C	ESA1	Q08649	445 aa		4.21	□□□□□ -1.74
ABD1	YBR236C	RPN5	Q12250	445 aa	Known RBP	4.21	□□□□□ -1.74
ABD1	YBR236C	YLR108C	Q12259	485 aa		4.21	□□□□□ -1.74
ABD1	YBR236C	SNU66	Q12420	587 aa	Predicted RBP	4.21	□□□□□ -1.74
ABD1	YBR236C	YSP2	Q06681	1438 aa		4.2	□□□□□ -1.74
ABD1	YBR236C	PDE2	P06776	526 aa		4.2	□□□□□ -1.74
ABD1	YBR236C	YBR056W	P38081	501 aa		4.2	□□□□□ -1.74
ABD1	YBR236C	MTC6	P38849	526 aa		4.2	□□□□□ -1.74
ABD1	YBR236C	YIL067C	P40514	678 aa		4.2	□□□□□ -1.74
ABD1	YBR236C	EFM4	P40516	257 aa		4.2	□□□□□ -1.74
ABD1	YBR236C	RPN9	Q04062	393 aa	Known RBP	4.2	□□□□□ -1.74
ABD1	YBR236C	PPM1	Q04081	328 aa		4.2	□□□□□ -1.74
ABD1	YBR236C	SNX3	Q08826	162 aa	Known RBP	4.2	□□□□□ -1.74
ABD1	YBR236C	ATG34	Q12292	412 aa		4.2	□□□□□ -1.74
ABD1	YBR236C	SPO12	P17123	173 aa		4.19	□□□□□ -1.74
ABD1	YBR236C	NIP1	P32497	812 aa	Known RBP	4.19	□□□□□ -1.74
ABD1	YBR236C	GAT2	P40209	560 aa		4.19	□□□□□ -1.74
ABD1	YBR236C	NCA3	P46955	337 aa		4.19	□□□□□ -1.74
ABD1	YBR236C	PIB2	P53191	635 aa		4.19	□□□□□ -1.74
ABD1	YBR236C	RCF1	Q03713	159 aa		4.19	□□□□□ -1.74
ABD1	YBR236C	PRP42	Q03776	544 aa	Known RBP	4.19	□□□□□ -1.74
ABD1	YBR236C	RRN11	Q04712	507 aa		4.19	□□□□□ -1.74
ABD1	YBR236C	YER078W-A	Q3E7A2	54 aa		4.19	□□□□□ -1.74
ABD1	YBR236C	CAT8	P39113	1433 aa		4.18	□□□□□ -1.74
ABD1	YBR236C	IMA3	P0CW40	589 aa		4.18	□□□□□ -1.74
ABD1	YBR236C	IMA4	P0CW41	589 aa		4.18	□□□□□ -1.74
ABD1	YBR236C	CPR4	P25334	318 aa		4.18	□□□□□ -1.74
ABD1	YBR236C	CYS4	P32582	507 aa	Known RBP	4.18	□□□□□ -1.74
ABD1	YBR236C	AZR1	P50080	613 aa		4.18	□□□□□ -1.74
ABD1	YBR236C	BOR1	P53838	576 aa		4.18	□□□□□ -1.74
ABD1	YBR236C	HXT11	P54862	567 aa		4.18	□□□□□ -1.74
ABD1	YBR236C	URH1	Q04179	340 aa		4.18	□□□□□ -1.74
ABD1	YBR236C	IMA2	Q08295	589 aa		4.18	□□□□□ -1.74
ABD1	YBR236C	RUP1	Q12242	671 aa		4.18	□□□□□ -1.74
ABD1	YBR236C	HSP104	P31539	908 aa	Known RBP	4.17	□□□□□ -1.74
ABD1	YBR236C	RGT1	P32862	1170 aa		4.17	□□□□□ -1.74
ABD1	YBR236C	SEC28	P40509	296 aa	Known RBP	4.17	□□□□□ -1.74
ABD1	YBR236C	YPS6	P40583	537 aa		4.17	□□□□□ -1.74
ABD1	YBR236C	SMA2	Q04658	369 aa		4.17	□□□□□ -1.74
ABD1	YBR236C	PBA1	Q05778	276 aa		4.17	□□□□□ -1.74
ABD1	YBR236C	SRL2	Q12020	392 aa		4.17	□□□□□ -1.74
ABD1	YBR236C	HSP82	P02829	709 aa	Known RBP	4.16	□□□□□ -1.74
ABD1	YBR236C	CDC21	P06785	304 aa		4.16	□□□□□ -1.74
ABD1	YBR236C	RPL1A	P0CX43	217 aa	Known RBP	4.16	□□□□□ -1.74
ABD1	YBR236C	RPL1B	P0CX44	217 aa	Known RBP	4.16	□□□□□ -1.74
ABD1	YBR236C	CBS2	P14905	389 aa		4.16	□□□□□ -1.74
ABD1	YBR236C	MUD1	P32605	298 aa	Known RBP	4.16	□□□□□ -1.74
ABD1	YBR236C	BLI1	P35727	113 aa		4.16	□□□□□ -1.74
ABD1	YBR236C	NDT80	P38830	627 aa		4.16	□□□□□ -1.74
ABD1	YBR236C	STN1	P38960	494 aa		4.16	□□□□□ -1.74
ABD1	YBR236C	YER079W	P40052	210 aa	Known RBP	4.16	□□□□□ -1.74
ABD1	YBR236C	BRO1	P48582	844 aa		4.16	□□□□□ -1.74
ABD1	YBR236C	STD1	Q02794	444 aa		4.16	□□□□□ -1.74
ABD1	YBR236C	MMT1	Q03218	510 aa		4.16	□□□□□ -1.74
ABD1	YBR236C	YDR341C	Q05506	607 aa	Known RBP	4.16	□□□□□ -1.74
ABD1	YBR236C	SNT309	Q06091	175 aa	Predicted RBP	4.16	□□□□□ -1.74
ABD1	YBR236C	TSR1	Q07381	788 aa	Known RBP	4.16	□□□□□ -1.74
ABD1	YBR236C	HHF1	P02309	103 aa	Known RBP	4.15	□□□□□ -1.75
ABD1	YBR236C	DST1	P07273	309 aa		4.15	□□□□□ -1.75
ABD1	YBR236C	ALG1	P16661	449 aa		4.15	□□□□□ -1.75
ABD1	YBR236C	DEG1	P31115	442 aa	Known RBP	4.15	□□□□□ -1.75
ABD1	YBR236C	SDH3	P33421	198 aa		4.15	□□□□□ -1.75
ABD1	YBR236C	YBL059W	P34224	193 aa		4.15	□□□□□ -1.75
ABD1	YBR236C	YBR137W	P38276	179 aa		4.15	□□□□□ -1.75
ABD1	YBR236C	TOF1	P53840	1238 aa		4.15	□□□□□ -1.75
ABD1	YBR236C	RHO5	P53879	331 aa	Known RBP	4.15	□□□□□ -1.75
ABD1	YBR236C	RRP9	Q06506	573 aa	Known RBP	4.15	□□□□□ -1.75
ABD1	YBR236C	USO1	P25386	1790 aa		4.14	□□□□□ -1.75
ABD1	YBR236C	SPT15	P13393	240 aa	Known RBP	4.14	□□□□□ -1.75
ABD1	YBR236C	RRP7	P25368	297 aa	Predicted RBP	4.14	□□□□□ -1.75
ABD1	YBR236C	PHO91	P27514	894 aa		4.14	□□□□□ -1.75
ABD1	YBR236C	ATP3	P38077	311 aa	Known RBP	4.14	□□□□□ -1.75
ABD1	YBR236C	RXT2	P38255	430 aa		4.14	□□□□□ -1.75
ABD1	YBR236C	INM1	P38710	295 aa		4.14	□□□□□ -1.75
ABD1	YBR236C	PRM5	P40476	318 aa		4.14	□□□□□ -1.75
ABD1	YBR236C	SFH5	P47008	294 aa		4.14	□□□□□ -1.75
ABD1	YBR236C	ROG1	P53118	685 aa		4.14	□□□□□ -1.75
ABD1	YBR236C	PEX25	Q02969	394 aa		4.14	□□□□□ -1.75
ABD1	YBR236C	BCH1	Q05029	724 aa		4.14	□□□□□ -1.75
ABD1	YBR236C	YOR387C	Q08910	206 aa		4.14	□□□□□ -1.75
ABD1	YBR236C	GEA1	P47102	1408 aa	Predicted RBP	4.13	□□□□□ -1.75
ABD1	YBR236C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
ABD1	YBR236C	AVT5	P38176	459 aa		4.13	□□□□□ -1.75
ABD1	YBR236C	GPI16	P38875	610 aa		4.13	□□□□□ -1.75
ABD1	YBR236C	ELP3	Q02908	557 aa	Known RBP	4.13	□□□□□ -1.75
ABD1	YBR236C	TPT1	Q12272	230 aa	Known RBP	4.13	□□□□□ -1.75
ABD1	YBR236C	ERV2	Q12284	196 aa		4.13	□□□□□ -1.75
ABD1	YBR236C	SEC7	P11075	2009 aa	Known RBP	4.13	□□□□□ -1.75
ABD1	YBR236C	PUP2	P32379	260 aa		4.12	□□□□□ -1.75
ABD1	YBR236C	YBR139W	P38109	508 aa		4.12	□□□□□ -1.75
ABD1	YBR236C	PTH1	P38876	190 aa	Known RBP	4.12	□□□□□ -1.75
ABD1	YBR236C	MMF1	P40185	145 aa	Known RBP	4.12	□□□□□ -1.75
ABD1	YBR236C	MDG1	P53885	366 aa		4.12	□□□□□ -1.75
ABD1	YBR236C	HER2	Q03557	464 aa		4.12	□□□□□ -1.75
ABD1	YBR236C	TLG2	Q08144	397 aa		4.12	□□□□□ -1.75
ABD1	YBR236C	TRP1	P00912	224 aa		4.11	□□□□□ -1.75
ABD1	YBR236C	NFT1	P0CE68	1218 aa		4.11	□□□□□ -1.75
ABD1	YBR236C	YCL068C	P25593	260 aa		4.11	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms