RNA–Protein interactions for RNA: YBR186W

PCH2, Transcript of Hexameric ring ATPase that remodels chromosome axis protein Hop1p, yeast

Gene PCH2, Length 1,695 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PCH2	YBR186W	YPT7	P32939	208 aa		11.16	□□□□□ -0.62
PCH2	YBR186W	LHP1	P33399	275 aa	Known RBP	11.16	□□□□□ -0.62
PCH2	YBR186W	TSA1	P34760	196 aa	Known RBP	11.16	□□□□□ -0.62
PCH2	YBR186W	APT2	P36973	181 aa		11.16	□□□□□ -0.62
PCH2	YBR186W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	11.16	□□□□□ -0.62	not detected
PCH2	YBR186W	HSE1	P38753	452 aa		11.16	□□□□□ -0.62
PCH2	YBR186W	YHR035W	P38769	630 aa		11.16	□□□□□ -0.62
PCH2	YBR186W	RRP4	P38792	359 aa	Known RBP	11.16	□□□□□ -0.62
PCH2	YBR186W	TIM54	P47045	478 aa		11.16	□□□□□ -0.62
PCH2	YBR186W	ECM27	P47144	725 aa		11.16	□□□□□ -0.62
PCH2	YBR186W	MUP1	P50276	574 aa		11.16	□□□□□ -0.62
PCH2	YBR186W	COQ6	P53318	479 aa		11.16	□□□□□ -0.62
PCH2	YBR186W	NSE5	Q03718	556 aa		11.16	□□□□□ -0.62
PCH2	YBR186W	FEX2	Q08991	375 aa		11.16	□□□□□ -0.62
PCH2	YBR186W	AI4	P03878	556 aa		11.15	□□□□□ -0.62
PCH2	YBR186W	FUM1	P08417	488 aa	Known RBP	11.15	□□□□□ -0.62
PCH2	YBR186W	HVG1	P0CE11	249 aa		11.15	□□□□□ -0.62
PCH2	YBR186W	DAL81	P21657	970 aa		11.15	□□□□□ -0.62
PCH2	YBR186W	RAM1	P22007	431 aa		11.15	□□□□□ -0.62
PCH2	YBR186W	MSS1	P32559	526 aa	Predicted RBP	11.15	□□□□□ -0.62
PCH2	YBR186W	MSN2	P33748	704 aa		11.15	□□□□□ -0.62
PCH2	YBR186W	MNN2	P38069	597 aa		11.15	□□□□□ -0.62
PCH2	YBR186W	YBR063C	P38083	404 aa		11.15	□□□□□ -0.62
PCH2	YBR186W	BIG1	P38813	335 aa		11.15	□□□□□ -0.62
PCH2	YBR186W	AIM10	P39965	576 aa	Known RBP	11.15	□□□□□ -0.62
PCH2	YBR186W	HPA3	P39979	161 aa		11.15	□□□□□ -0.62
PCH2	YBR186W	ZRG8	P40021	1076 aa		11.15	□□□□□ -0.62
PCH2	YBR186W	TIR3	P40552	269 aa		11.15	□□□□□ -0.62
PCH2	YBR186W	YGR201C	P42936	225 aa		11.15	□□□□□ -0.62
PCH2	YBR186W	VHS1	Q03785	461 aa		11.15	□□□□□ -0.62
PCH2	YBR186W	YPR011C	Q12251	326 aa		11.15	□□□□□ -0.62
PCH2	YBR186W	AI3	P03877	415 aa		11.14	□□□□□ -0.63
PCH2	YBR186W	LEU4	P06208	619 aa	Known RBP	11.14	□□□□□ -0.63
PCH2	YBR186W	SPO23	P33757	523 aa		11.14	□□□□□ -0.63
PCH2	YBR186W	ANR2	P36090	516 aa	Predicted RBP	11.14	□□□□□ -0.63
PCH2	YBR186W	MCM7	P38132	845 aa		11.14	□□□□□ -0.63
PCH2	YBR186W	YBR071W	P38243	211 aa		11.14	□□□□□ -0.63
PCH2	YBR186W	NDE1	P40215	560 aa		11.14	□□□□□ -0.63
PCH2	YBR186W	BUD17	P53727	317 aa		11.14	□□□□□ -0.63
PCH2	YBR186W	TDA1	Q03533	586 aa		11.14	□□□□□ -0.63
PCH2	YBR186W	YLR346C	Q06139	101 aa		11.14	□□□□□ -0.63
PCH2	YBR186W	PUS5	Q06244	254 aa		11.14	□□□□□ -0.63
PCH2	YBR186W	SFG1	Q12507	346 aa		11.14	□□□□□ -0.63
PCH2	YBR186W	DSF1	P0CX08	502 aa		11.14	□□□□□ -0.63
PCH2	YBR186W	YNR073C	P0CX09	502 aa		11.14	□□□□□ -0.63
PCH2	YBR186W	HOM6	P31116	359 aa	Known RBP	11.14	□□□□□ -0.63
PCH2	YBR186W	LSM12	P38828	187 aa	Known RBP	11.14	□□□□□ -0.63
PCH2	YBR186W	CHA4	P43634	648 aa		11.14	□□□□□ -0.63
PCH2	YBR186W	NNF1	P47149	201 aa		11.14	□□□□□ -0.63
PCH2	YBR186W	ERV29	P53337	310 aa		11.14	□□□□□ -0.63
PCH2	YBR186W	FRE4	P53746	719 aa		11.14	□□□□□ -0.63
PCH2	YBR186W	YPL034W	Q03083	165 aa		11.14	□□□□□ -0.63
PCH2	YBR186W	YLR224W	Q05947	369 aa		11.14	□□□□□ -0.63
PCH2	YBR186W	BUR2	Q05949	395 aa		11.14	□□□□□ -0.63
PCH2	YBR186W	FRE5	Q08908	694 aa		11.14	□□□□□ -0.63
PCH2	YBR186W	TFB4	Q12004	338 aa		11.14	□□□□□ -0.63
PCH2	YBR186W	ATP14	Q12349	124 aa		11.14	□□□□□ -0.63
PCH2	YBR186W	SWI5	P08153	709 aa		11.13	□□□□□ -0.63
PCH2	YBR186W	RPS1B	P23248	255 aa	Known RBP	11.13	□□□□□ -0.63
PCH2	YBR186W	FUB1	P25659	250 aa		11.13	□□□□□ -0.63
PCH2	YBR186W	IFA38	P38286	347 aa		11.13	□□□□□ -0.63
PCH2	YBR186W	SSN3	P39073	555 aa		11.13	□□□□□ -0.63
PCH2	YBR186W	YNL034W	P53963	612 aa		11.13	□□□□□ -0.63
PCH2	YBR186W	SCS7	Q03529	384 aa		11.13	□□□□□ -0.63
PCH2	YBR186W	ARV1	Q06541	321 aa		11.13	□□□□□ -0.63
PCH2	YBR186W	NAR1	P23503	491 aa	Known RBP	11.12	□□□□□ -0.63
PCH2	YBR186W	PUP1	P25043	261 aa		11.12	□□□□□ -0.63
PCH2	YBR186W	VPH1	P32563	840 aa	Known RBP	11.12	□□□□□ -0.63
PCH2	YBR186W	SEC61	P32915	480 aa		11.12	□□□□□ -0.63
PCH2	YBR186W	PMT1	P33775	817 aa		11.12	□□□□□ -0.63
PCH2	YBR186W	YIR016W	P40572	265 aa		11.12	□□□□□ -0.63
PCH2	YBR186W	YFR018C	P43599	363 aa		11.12	□□□□□ -0.63
PCH2	YBR186W	LSM1	P47017	172 aa	Known RBP	11.12	□□□□□ -0.63
PCH2	YBR186W	IMO32	P53219	342 aa		11.12	□□□□□ -0.63
PCH2	YBR186W	HST3	P53687	447 aa		11.12	□□□□□ -0.63
PCH2	YBR186W	YSA1	Q01976	231 aa		11.12	□□□□□ -0.63
PCH2	YBR186W	OAZ1	Q02803	292 aa		11.12	□□□□□ -0.63
PCH2	YBR186W	VID22	Q05934	901 aa		11.12	□□□□□ -0.63
PCH2	YBR186W	YLR036C	Q07986	203 aa		11.12	□□□□□ -0.63
PCH2	YBR186W	SYC1	Q08553	188 aa	Predicted RBP	11.12	□□□□□ -0.63
PCH2	YBR186W	YOR283W	Q12040	230 aa	Known RBP	11.12	□□□□□ -0.63
PCH2	YBR186W	NMD4	Q12129	218 aa		11.12	□□□□□ -0.63
PCH2	YBR186W	SIR2	P06700	562 aa		11.11	□□□□□ -0.63
PCH2	YBR186W	CMP2	P14747	604 aa		11.11	□□□□□ -0.63
PCH2	YBR186W	YPT52	P36018	234 aa	Known RBP	11.11	□□□□□ -0.63
PCH2	YBR186W	YJR030C	P47101	745 aa		11.11	□□□□□ -0.63
PCH2	YBR186W	UBC12	P52491	188 aa		11.11	□□□□□ -0.63
PCH2	YBR186W	MDM34	P53083	459 aa		11.11	□□□□□ -0.63
PCH2	YBR186W	BUD9	P53226	547 aa		11.11	□□□□□ -0.63
PCH2	YBR186W	GIP3	Q03016	1276 aa		11.11	□□□□□ -0.63
PCH2	YBR186W	RIM13	Q03792	727 aa		11.11	□□□□□ -0.63
PCH2	YBR186W	YPR114W	Q06107	315 aa		11.11	□□□□□ -0.63
PCH2	YBR186W	YLR173W	Q06247	608 aa		11.11	□□□□□ -0.63
PCH2	YBR186W	NDJ1	Q12366	352 aa		11.11	□□□□□ -0.63
PCH2	YBR186W	GCN4	P03069	281 aa		11.11	□□□□□ -0.63
PCH2	YBR186W	PEP4	P07267	405 aa	Known RBP	11.11	□□□□□ -0.63
PCH2	YBR186W	YCR102C	P25608	368 aa		11.11	□□□□□ -0.63
PCH2	YBR186W	YIM1	P28625	365 aa		11.11	□□□□□ -0.63
PCH2	YBR186W	CAM1	P29547	415 aa	Known RBP	11.11	□□□□□ -0.63
PCH2	YBR186W	HXT4	P32467	576 aa		11.11	□□□□□ -0.63

Retrieved 100 of 5,963 RNA–protein pairs in 85.7 ms