RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 FIBPO43427 364 aa10.64□□□□□ -0.71
PHGDH-228ENST00000641847 BAIAP3O94812 1187 aa10.64□□□□□ -0.71
PHGDH-228ENST00000641847 EIF2AK2P19525 551 aaKnown RBP10.64□□□□□ -0.71
PHGDH-228ENST00000641847 IRX5P78411 483 aaPredicted RBP10.64□□□□□ -0.71
PHGDH-228ENST00000641847 ARHGAP4P98171 946 aa10.64□□□□□ -0.71
PHGDH-228ENST00000641847 CEBPZQ03701 1054 aaKnown RBP10.64□□□□□ -0.71
PHGDH-228ENST00000641847 ATL3Q6DD88 541 aa10.64□□□□□ -0.71
PHGDH-228ENST00000641847 PURBQ96QR8 312 aaKnown RBP10.64□□□□□ -0.71
PHGDH-228ENST00000641847 TAAR1Q96RJ0 339 aa10.64□□□□□ -0.71
PHGDH-228ENST00000641847 RMDN3Q96TC7 470 aa10.64□□□□□ -0.71
PHGDH-228ENST00000641847 PRRX2Q99811 253 aa10.64□□□□□ -0.71
PHGDH-228ENST00000641847 PXMP2Q9NR77 195 aa10.64□□□□□ -0.71
PHGDH-228ENST00000641847 PCDHB6Q9Y5E3 794 aa10.64□□□□□ -0.71
PHGDH-228ENST00000641847 ASB14A6NK59 587 aa10.63□□□□□ -0.71
PHGDH-228ENST00000641847 ADCY6O43306 1168 aa10.63□□□□□ -0.71
PHGDH-228ENST00000641847 CCNT1O60563 726 aaKnown RBP10.63□□□□□ -0.71
PHGDH-228ENST00000641847 TDP2O95551 362 aa10.63□□□□□ -0.71
PHGDH-228ENST00000641847 NASPP49321 788 aaPredicted RBP10.63□□□□□ -0.71
PHGDH-228ENST00000641847 STK38Q15208 465 aa10.63□□□□□ -0.71
PHGDH-228ENST00000641847 SF3A1Q15459 793 aaKnown RBP10.63□□□□□ -0.71
PHGDH-228ENST00000641847 ZNF174Q15697 407 aa10.63□□□□□ -0.71
PHGDH-228ENST00000641847 BRDTQ58F21 947 aaPredicted RBP10.63□□□□□ -0.71
PHGDH-228ENST00000641847 ARHGEF16Q5VV41 709 aa10.63□□□□□ -0.71
PHGDH-228ENST00000641847 FAM133AQ8N9E0 248 aa10.63□□□□□ -0.71
PHGDH-228ENST00000641847 IL31RAQ8NI17 732 aa10.63□□□□□ -0.71
PHGDH-228ENST00000641847 CRYGNQ8WXF5 182 aa10.63□□□□□ -0.71
PHGDH-228ENST00000641847 NAP1L4Q99733 375 aaKnown RBP10.63□□□□□ -0.71
PHGDH-228ENST00000641847 PDCD2LQ9BRP1 358 aa10.63□□□□□ -0.71
PHGDH-228ENST00000641847 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.63□□□□□ -0.71
PHGDH-228ENST00000641847 POLR3EQ9NVU0 708 aa10.63□□□□□ -0.71
PHGDH-228ENST00000641847 RTEL1Q9NZ71 1219 aa10.63□□□□□ -0.71
PHGDH-228ENST00000641847 TFIP11Q9UBB9 837 aaKnown RBP10.63□□□□□ -0.71
PHGDH-228ENST00000641847 CFAP45Q9UL16 551 aa10.63□□□□□ -0.71
PHGDH-228ENST00000641847 CLIC4Q9Y696 253 aa10.63□□□□□ -0.71
PHGDH-228ENST00000641847 ASTN1O14525 1302 aa10.62□□□□□ -0.71
PHGDH-228ENST00000641847 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.62□□□□□ -0.71
PHGDH-228ENST00000641847 SOWAHBA6NEL2 793 aa10.62□□□□□ -0.71
PHGDH-228ENST00000641847 CTAGE5O15320 804 aa10.62□□□□□ -0.71
PHGDH-228ENST00000641847 EDIL3O43854 480 aa10.62□□□□□ -0.71
PHGDH-228ENST00000641847 NEMFO60524 1076 aa10.62□□□□□ -0.71
PHGDH-228ENST00000641847 YEATS4O95619 227 aa10.62□□□□□ -0.71
PHGDH-228ENST00000641847 CYP3A4P08684 503 aa10.62□□□□□ -0.71
PHGDH-228ENST00000641847 CCND2P30279 289 aa10.62□□□□□ -0.71
PHGDH-228ENST00000641847 MCM7P33993 719 aa10.62□□□□□ -0.71
PHGDH-228ENST00000641847 ZNF76P36508 570 aa10.62□□□□□ -0.71
PHGDH-228ENST00000641847 ALDH5A1P51649 535 aaPredicted RBP10.62□□□□□ -0.71
PHGDH-228ENST00000641847 USP11P51784 963 aa10.62□□□□□ -0.71
PHGDH-228ENST00000641847 PTPN5P54829 565 aa10.62□□□□□ -0.71
PHGDH-228ENST00000641847 CNTN2Q02246 1040 aa10.62□□□□□ -0.71
PHGDH-228ENST00000641847 ORC2Q13416 577 aaPredicted RBP10.62□□□□□ -0.71
PHGDH-228ENST00000641847 BFSP2Q13515 415 aa10.62□□□□□ -0.71
PHGDH-228ENST00000641847 PGM5Q15124 567 aa10.62□□□□□ -0.71
PHGDH-228ENST00000641847 MOXD1Q6UVY6 613 aa10.62□□□□□ -0.71
PHGDH-228ENST00000641847 CLEC17AQ6ZS10 378 aa10.62□□□□□ -0.71
PHGDH-228ENST00000641847 DNERQ8NFT8 737 aa10.62□□□□□ -0.71
PHGDH-228ENST00000641847 NSUN6Q8TEA1 469 aaKnown RBP10.62□□□□□ -0.71
PHGDH-228ENST00000641847 SPATA32Q96LK8 384 aa10.62□□□□□ -0.71
PHGDH-228ENST00000641847 GDPD2Q9HCC8 539 aa10.62□□□□□ -0.71
PHGDH-228ENST00000641847 ADD3Q9UEY8 706 aaKnown RBP10.62□□□□□ -0.71
PHGDH-228ENST00000641847 PRKAG3Q9UGI9 489 aa10.62□□□□□ -0.71
PHGDH-228ENST00000641847 DDX25Q9UHL0 483 aaKnown RBP10.62□□□□□ -0.71
PHGDH-228ENST00000641847 CEP131Q9UPN4 1083 aa10.62□□□□□ -0.71
PHGDH-228ENST00000641847 NOD1Q9Y239 953 aa10.62□□□□□ -0.71
PHGDH-228ENST00000641847 Q9Y3F1 56 aa10.62□□□□□ -0.71
PHGDH-228ENST00000641847 ZDBF2Q9HCK1 2354 aa10.62□□□□□ -0.71
PHGDH-228ENST00000641847 TCHHQ07283 1943 aa10.62□□□□□ -0.71
PHGDH-228ENST00000641847 ZNFX1Q9P2E3 1918 aaKnown RBP10.62□□□□□ -0.71
PHGDH-228ENST00000641847 GRIN2DO15399 1336 aa10.61□□□□□ -0.71
PHGDH-228ENST00000641847 BRWD1Q9NSI6 2320 aa10.61□□□□□ -0.71
PHGDH-228ENST00000641847 CYP3A7-CYP3A51PA0A087WV96 503 aa10.61□□□□□ -0.71
PHGDH-228ENST00000641847 GRXCR2A6NFK2 248 aa10.61□□□□□ -0.71
PHGDH-228ENST00000641847 PITPNM1O00562 1244 aa10.61□□□□□ -0.71
PHGDH-228ENST00000641847 SLC37A4O43826 429 aa10.61□□□□□ -0.71
PHGDH-228ENST00000641847 LPXNO60711 386 aa10.61□□□□□ -0.71
PHGDH-228ENST00000641847 BMP15O95972 392 aa10.61□□□□□ -0.71
PHGDH-228ENST00000641847 CYP2C9P11712 490 aa10.61□□□□□ -0.71
PHGDH-228ENST00000641847 MYCLP12524 364 aaPredicted RBP10.61□□□□□ -0.71
PHGDH-228ENST00000641847 IL9P15248 144 aa10.61□□□□□ -0.71
PHGDH-228ENST00000641847 GCFC2P16383 781 aaKnown RBP10.61□□□□□ -0.71
PHGDH-228ENST00000641847 CYP3A7P24462 503 aa10.61□□□□□ -0.71
PHGDH-228ENST00000641847 PSMC6P62333 389 aa10.61□□□□□ -0.71
PHGDH-228ENST00000641847 PTPAQ15257 358 aa10.61□□□□□ -0.71
PHGDH-228ENST00000641847 PTPROQ16827 1216 aa10.61□□□□□ -0.71
PHGDH-228ENST00000641847 PCNX4Q63HM2 1172 aa10.61□□□□□ -0.71
PHGDH-228ENST00000641847 IQSEC1Q6DN90 963 aa10.61□□□□□ -0.71
PHGDH-228ENST00000641847 PPP4R3AQ6IN85 833 aa10.61□□□□□ -0.71
PHGDH-228ENST00000641847 POTEDQ86YR6 584 aa10.61□□□□□ -0.71
PHGDH-228ENST00000641847 CCDC155Q8N6L0 562 aa10.61□□□□□ -0.71
PHGDH-228ENST00000641847 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.61□□□□□ -0.71
PHGDH-228ENST00000641847 KCNG4Q8TDN1 519 aa10.61□□□□□ -0.71
PHGDH-228ENST00000641847 GDPD5Q8WTR4 605 aa10.61□□□□□ -0.71
PHGDH-228ENST00000641847 LEO1Q8WVC0 666 aaPredicted RBP10.61□□□□□ -0.71
PHGDH-228ENST00000641847 FGD4Q96M96 766 aa10.61□□□□□ -0.71
PHGDH-228ENST00000641847 TGS1Q96RS0 853 aaKnown RBP10.61□□□□□ -0.71
PHGDH-228ENST00000641847 SCAND2PQ9GZW5 306 aaPredicted RBP10.61□□□□□ -0.71
PHGDH-228ENST00000641847 TRMT13Q9NUP7 481 aaKnown RBP10.61□□□□□ -0.71
PHGDH-228ENST00000641847 GNEQ9Y223 722 aaKnown RBP10.61□□□□□ -0.71
PHGDH-228ENST00000641847 ZFHX2Q9C0A1 2572 aaPredicted RBP10.61□□□□□ -0.71
PHGDH-228ENST00000641847 GBF1Q92538 1859 aa10.6□□□□□ -0.71
PHGDH-228ENST00000641847 POTEB3A0JP26 581 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms