RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 WRAP73Q9P2S5 460 aaPredicted RBP10.25□□□□□ -0.77
SCARB2-225ENST00000640900 LRWD1Q9UFC0 647 aa10.25□□□□□ -0.77
SCARB2-225ENST00000640900 EMSYQ7Z589 1322 aa10.25□□□□□ -0.77
SCARB2-225ENST00000640900 IGSF9BQ9UPX0 1349 aa10.25□□□□□ -0.77
SCARB2-225ENST00000640900 DNAH12Q6ZR08 3092 aa10.25□□□□□ -0.77
SCARB2-225ENST00000640900 ZNF862O60290 1169 aa10.24□□□□□ -0.77
SCARB2-225ENST00000640900 MSCO60682 206 aa10.24□□□□□ -0.77
SCARB2-225ENST00000640900 MED24O75448 989 aa10.24□□□□□ -0.77
SCARB2-225ENST00000640900 P4HBP07237 508 aaKnown RBP10.24□□□□□ -0.77
SCARB2-225ENST00000640900 XRCC6P12956 609 aaKnown RBP eCLIP10.24□□□□□ -0.77
SCARB2-225ENST00000640900 CDC25AP30304 524 aa10.24□□□□□ -0.77
SCARB2-225ENST00000640900 SPECC1Q5M775 1068 aa10.24□□□□□ -0.77
SCARB2-225ENST00000640900 PLPPR4Q7Z2D5 763 aa10.24□□□□□ -0.77
SCARB2-225ENST00000640900 DHX37Q8IY37 1157 aaKnown RBP10.24□□□□□ -0.77
SCARB2-225ENST00000640900 C4orf19Q8IY42 314 aa10.24□□□□□ -0.77
SCARB2-225ENST00000640900 FMR1NBQ8N0W7 255 aaPredicted RBP10.24□□□□□ -0.77
SCARB2-225ENST00000640900 AFG1LQ8WV93 481 aa10.24□□□□□ -0.77
SCARB2-225ENST00000640900 MRPS27Q92552 414 aaKnown RBP10.24□□□□□ -0.77
SCARB2-225ENST00000640900 ZNF333Q96JL9 665 aa10.24□□□□□ -0.77
SCARB2-225ENST00000640900 SPATA33Q96N06 139 aa10.24□□□□□ -0.77
SCARB2-225ENST00000640900 C16orf70Q9BSU1 422 aa10.24□□□□□ -0.77
SCARB2-225ENST00000640900 MLXIPQ9HAP2 919 aa10.24□□□□□ -0.77
SCARB2-225ENST00000640900 RGL1Q9NZL6 768 aa10.24□□□□□ -0.77
SCARB2-225ENST00000640900 PKD2L1Q9P0L9 805 aa10.24□□□□□ -0.77
SCARB2-225ENST00000640900 DDX20Q9UHI6 824 aaKnown RBP10.24□□□□□ -0.77
SCARB2-225ENST00000640900 PCDHB13Q9Y5F0 798 aa10.24□□□□□ -0.77
SCARB2-225ENST00000640900 MARCH6O60337 910 aa10.23□□□□□ -0.77
SCARB2-225ENST00000640900 PSAPP07602 524 aa10.23□□□□□ -0.77
SCARB2-225ENST00000640900 MMP3P08254 477 aa10.23□□□□□ -0.77
SCARB2-225ENST00000640900 PFKFB1P16118 471 aa10.23□□□□□ -0.77
SCARB2-225ENST00000640900 LIG1P18858 919 aa10.23□□□□□ -0.77
SCARB2-225ENST00000640900 ATP4AP20648 1035 aa10.23□□□□□ -0.77
SCARB2-225ENST00000640900 QARSP47897 775 aaKnown RBP10.23□□□□□ -0.77
SCARB2-225ENST00000640900 NDUFA8P51970 172 aa10.23□□□□□ -0.77
SCARB2-225ENST00000640900 UGCGQ16739 394 aa10.23□□□□□ -0.77
SCARB2-225ENST00000640900 KRT79Q5XKE5 535 aa10.23□□□□□ -0.77
SCARB2-225ENST00000640900 HAUS3Q68CZ6 603 aa10.23□□□□□ -0.77
SCARB2-225ENST00000640900 MIS18BP1Q6P0N0 1132 aa10.23□□□□□ -0.77
SCARB2-225ENST00000640900 MIER3Q7Z3K6 550 aa10.23□□□□□ -0.77
SCARB2-225ENST00000640900 TLK2Q86UE8 772 aa10.23□□□□□ -0.77
SCARB2-225ENST00000640900 CABP7Q86V35 215 aa10.23□□□□□ -0.77
SCARB2-225ENST00000640900 CCDC60Q8IWA6 550 aaPredicted RBP10.23□□□□□ -0.77
SCARB2-225ENST00000640900 ELOA2Q8IYF1 753 aaPredicted RBP10.23□□□□□ -0.77
SCARB2-225ENST00000640900 FSIP1Q8NA03 581 aa10.23□□□□□ -0.77
SCARB2-225ENST00000640900 GPT2Q8TD30 523 aa10.23□□□□□ -0.77
SCARB2-225ENST00000640900 SH3TC2Q8TF17 1288 aa10.23□□□□□ -0.77
SCARB2-225ENST00000640900 LENG1Q96BZ8 264 aaPredicted RBP10.23□□□□□ -0.77
SCARB2-225ENST00000640900 CEP89Q96ST8 783 aa10.23□□□□□ -0.77
SCARB2-225ENST00000640900 CRISPLD2Q9H0B8 497 aa10.23□□□□□ -0.77
SCARB2-225ENST00000640900 HMX1Q9NP08 348 aaPredicted RBP10.23□□□□□ -0.77
SCARB2-225ENST00000640900 BLOC1S4Q9NUP1 217 aa10.23□□□□□ -0.77
SCARB2-225ENST00000640900 KCNH3Q9ULD8 1083 aa10.23□□□□□ -0.77
SCARB2-225ENST00000640900 SYNRGQ9UMZ2 1314 aa10.23□□□□□ -0.77
SCARB2-225ENST00000640900 FRMPD3Q5JV73 1810 aa10.23□□□□□ -0.77
SCARB2-225ENST00000640900 SCN10AQ9Y5Y9 1956 aa10.23□□□□□ -0.77
SCARB2-225ENST00000640900 A0A1B0GVL5 298 aa10.22□□□□□ -0.77
SCARB2-225ENST00000640900 DDX11L8A8MPP1 907 aa10.22□□□□□ -0.77
SCARB2-225ENST00000640900 GOLGA6L22H0YM25 854 aa10.22□□□□□ -0.77
SCARB2-225ENST00000640900 DDX39AO00148 427 aaKnown RBP10.22□□□□□ -0.77
SCARB2-225ENST00000640900 HAS3O00219 553 aa10.22□□□□□ -0.77
SCARB2-225ENST00000640900 DYNC1LI2O43237 492 aaPredicted RBP10.22□□□□□ -0.77
SCARB2-225ENST00000640900 ACTN4O43707 911 aaKnown RBP10.22□□□□□ -0.77
SCARB2-225ENST00000640900 KPNA6O60684 536 aa10.22□□□□□ -0.77
SCARB2-225ENST00000640900 F2P00734 622 aa10.22□□□□□ -0.77
SCARB2-225ENST00000640900 RARBP10826 455 aa10.22□□□□□ -0.77
SCARB2-225ENST00000640900 HOXC8P31273 242 aa10.22□□□□□ -0.77
SCARB2-225ENST00000640900 TCF7P36402 384 aaPredicted RBP10.22□□□□□ -0.77
SCARB2-225ENST00000640900 UBA7P41226 1012 aa10.22□□□□□ -0.77
SCARB2-225ENST00000640900 SLC26A2P50443 739 aa10.22□□□□□ -0.77
SCARB2-225ENST00000640900 PSMC5P62195 406 aa10.22□□□□□ -0.77
SCARB2-225ENST00000640900 IRX5P78411 483 aaPredicted RBP10.22□□□□□ -0.77
SCARB2-225ENST00000640900 FAM160A1Q05DH4 1040 aa10.22□□□□□ -0.77
SCARB2-225ENST00000640900 KARSQ15046 597 aaKnown RBP10.22□□□□□ -0.77
SCARB2-225ENST00000640900 MTFR1Q15390 333 aa10.22□□□□□ -0.77
SCARB2-225ENST00000640900 TARBP2Q15633 366 aaKnown RBP10.22□□□□□ -0.77
SCARB2-225ENST00000640900 NFKBIBQ15653 356 aa10.22□□□□□ -0.77
SCARB2-225ENST00000640900 FSCN1Q16658 493 aaKnown RBP10.22□□□□□ -0.77
SCARB2-225ENST00000640900 SLC9C1Q4G0N8 1177 aa10.22□□□□□ -0.77
SCARB2-225ENST00000640900 NCAPH2Q6IBW4 605 aa10.22□□□□□ -0.77
SCARB2-225ENST00000640900 PDXDC2PQ6P474 469 aa10.22□□□□□ -0.77
SCARB2-225ENST00000640900 CNNM4Q6P4Q7 775 aa10.22□□□□□ -0.77
SCARB2-225ENST00000640900 KCNK18Q7Z418 384 aa10.22□□□□□ -0.77
SCARB2-225ENST00000640900 SH3RF1Q7Z6J0 888 aa10.22□□□□□ -0.77
SCARB2-225ENST00000640900 OR6J1Q8NGC5 347 aa10.22□□□□□ -0.77
SCARB2-225ENST00000640900 ERMNQ8TAM6 284 aa10.22□□□□□ -0.77
SCARB2-225ENST00000640900 SNX29Q8TEQ0 813 aa10.22□□□□□ -0.77
SCARB2-225ENST00000640900 KAT2BQ92831 832 aa10.22□□□□□ -0.77
SCARB2-225ENST00000640900 DYDC2Q96IM9 177 aa10.22□□□□□ -0.77
SCARB2-225ENST00000640900 TIGD1Q96MW7 591 aa10.22□□□□□ -0.77
SCARB2-225ENST00000640900 MTRQ99707 1265 aa10.22□□□□□ -0.77
SCARB2-225ENST00000640900 NIFKQ9BYG3 293 aaKnown RBP10.22□□□□□ -0.77
SCARB2-225ENST00000640900 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.22□□□□□ -0.77
SCARB2-225ENST00000640900 UNC93B1Q9H1C4 597 aa10.22□□□□□ -0.77
SCARB2-225ENST00000640900 ZSWIM4Q9H7M6 989 aa10.22□□□□□ -0.77
SCARB2-225ENST00000640900 USP25Q9UHP3 1055 aa10.22□□□□□ -0.77
SCARB2-225ENST00000640900 OGDHLQ9ULD0 1010 aa10.22□□□□□ -0.77
SCARB2-225ENST00000640900 KDM3AQ9Y4C1 1321 aa10.22□□□□□ -0.77
SCARB2-225ENST00000640900 POTEB3A0JP26 581 aa10.21□□□□□ -0.77
SCARB2-225ENST00000640900 MYADML2A6NDP7 307 aa10.21□□□□□ -0.77
SCARB2-225ENST00000640900 ZBTB42B2RXF5 422 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms