RNA–Protein interactions for RNA: ENST00000628689.2

TCF4-266, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-266ENST00000628689 CHST3Q7LGC8 479 aa8.41□□□□□ -1.06
TCF4-266ENST00000628689 RPAP2Q8IXW5 612 aaPredicted RBP8.41□□□□□ -1.06
TCF4-266ENST00000628689 ZBTB44Q8NCP5 570 aa8.41□□□□□ -1.06
TCF4-266ENST00000628689 DDX1Q92499 740 aaKnown RBP8.41□□□□□ -1.06
TCF4-266ENST00000628689 KATNAL1Q9BW62 490 aa8.41□□□□□ -1.06
TCF4-266ENST00000628689 KCNK12Q9HB15 430 aa8.41□□□□□ -1.06
TCF4-266ENST00000628689 CA14Q9ULX7 337 aa8.41□□□□□ -1.06
TCF4-266ENST00000628689 PCDHGA2Q9Y5H1 932 aa8.41□□□□□ -1.06
TCF4-266ENST00000628689 TMEM232C9JQI7 657 aa8.4□□□□□ -1.06
TCF4-266ENST00000628689 PRKAB2O43741 272 aa8.4□□□□□ -1.06
TCF4-266ENST00000628689 TBC1D4O60343 1298 aa8.4□□□□□ -1.06
TCF4-266ENST00000628689 LRRN2O75325 713 aa8.4□□□□□ -1.06
TCF4-266ENST00000628689 GH1P01241 217 aa8.4□□□□□ -1.06
TCF4-266ENST00000628689 ZNF286BP0CG31 522 aa8.4□□□□□ -1.06
TCF4-266ENST00000628689 BMP3P12645 472 aa8.4□□□□□ -1.06
TCF4-266ENST00000628689 TSR1Q2NL82 804 aaKnown RBP8.4□□□□□ -1.06
TCF4-266ENST00000628689 PAN2Q504Q3 1202 aaKnown RBP8.4□□□□□ -1.06
TCF4-266ENST00000628689 TNNI3KQ59H18 835 aa8.4□□□□□ -1.06
TCF4-266ENST00000628689 PDE12Q6L8Q7 609 aaKnown RBP8.4□□□□□ -1.06
TCF4-266ENST00000628689 PHLDB3Q6NSJ2 640 aa8.4□□□□□ -1.06
TCF4-266ENST00000628689 KANK3Q6NY19 840 aa8.4□□□□□ -1.06
TCF4-266ENST00000628689 TMED8Q6PL24 325 aaPredicted RBP8.4□□□□□ -1.06
TCF4-266ENST00000628689 LCORLQ8N3X6 602 aa8.4□□□□□ -1.06
TCF4-266ENST00000628689 CASP10Q92851 521 aa8.4□□□□□ -1.06
TCF4-266ENST00000628689 AAASQ9NRG9 546 aa8.4□□□□□ -1.06
TCF4-266ENST00000628689 DBR1Q9UK59 544 aaKnown RBP8.4□□□□□ -1.06
TCF4-266ENST00000628689 GMEB2Q9UKD1 530 aa8.4□□□□□ -1.06
TCF4-266ENST00000628689 FBXO4Q9UKT5 387 aa8.4□□□□□ -1.06
TCF4-266ENST00000628689 FPGT-TNNI3KV9GXZ4 949 aa8.4□□□□□ -1.06
TCF4-266ENST00000628689 AKAP13Q12802 2813 aa8.4□□□□□ -1.06
TCF4-266ENST00000628689 ITPR1Q14643 2758 aa8.39□□□□□ -1.07
TCF4-266ENST00000628689 MIA3Q5JRA6 1907 aa8.39□□□□□ -1.07
TCF4-266ENST00000628689 ACACAQ13085 2346 aa8.39□□□□□ -1.07
TCF4-266ENST00000628689 HIDE1A8MVS5 230 aa8.39□□□□□ -1.07
TCF4-266ENST00000628689 NFIBO00712 420 aa8.39□□□□□ -1.07
TCF4-266ENST00000628689 TM4SF5O14894 197 aa8.39□□□□□ -1.07
TCF4-266ENST00000628689 TREHO43280 583 aa8.39□□□□□ -1.07
TCF4-266ENST00000628689 FGF18O76093 207 aa8.39□□□□□ -1.07
TCF4-266ENST00000628689 CSTF1Q05048 431 aaKnown RBP8.39□□□□□ -1.07
TCF4-266ENST00000628689 APOBRQ0VD83 1088 aa8.39□□□□□ -1.07
TCF4-266ENST00000628689 G3BP1Q13283 466 aaKnown RBP eCLIP8.39□□□□□ -1.07
TCF4-266ENST00000628689 FAM26DQ5JW98 314 aa8.39□□□□□ -1.07
TCF4-266ENST00000628689 ATAT1Q5SQI0 421 aa8.39□□□□□ -1.07
TCF4-266ENST00000628689 PLPP4Q5VZY2 271 aa8.39□□□□□ -1.07
TCF4-266ENST00000628689 SLFN13Q68D06 897 aa8.39□□□□□ -1.07
TCF4-266ENST00000628689 C12orf76Q8N812 135 aaPredicted RBP8.39□□□□□ -1.07
TCF4-266ENST00000628689 FEZF2Q8TBJ5 459 aa8.39□□□□□ -1.07
TCF4-266ENST00000628689 CHURC1Q8WUH1 139 aa8.39□□□□□ -1.07
TCF4-266ENST00000628689 STAG1Q8WVM7 1258 aa8.39□□□□□ -1.07
TCF4-266ENST00000628689 NELL1Q92832 810 aa8.39□□□□□ -1.07
TCF4-266ENST00000628689 MAP4K1Q92918 833 aa8.39□□□□□ -1.07
TCF4-266ENST00000628689 ATP6V0A1Q93050 837 aa8.39□□□□□ -1.07
TCF4-266ENST00000628689 MKL1Q969V6 931 aa8.39□□□□□ -1.07
TCF4-266ENST00000628689 ZSCAN32Q9NX65 697 aa8.39□□□□□ -1.07
TCF4-266ENST00000628689 ANKFY1Q9P2R3 1169 aa8.39□□□□□ -1.07
TCF4-266ENST00000628689 HDAC5Q9UQL6 1122 aa8.39□□□□□ -1.07
TCF4-266ENST00000628689 HCFC2Q9Y5Z7 792 aa8.39□□□□□ -1.07
TCF4-266ENST00000628689 KAT6AQ92794 2004 aa8.38□□□□□ -1.07
TCF4-266ENST00000628689 PTPDC1A2A3K4 754 aa8.38□□□□□ -1.07
TCF4-266ENST00000628689 TMEM8BA6NDV4 472 aa8.38□□□□□ -1.07
TCF4-266ENST00000628689 CAND2O75155 1236 aa8.38□□□□□ -1.07
TCF4-266ENST00000628689 CHRNA1P02708 482 aa8.38□□□□□ -1.07
TCF4-266ENST00000628689 HOXD8P13378 290 aaPredicted RBP8.38□□□□□ -1.07
TCF4-266ENST00000628689 NCLP19338 710 aaKnown RBP8.38□□□□□ -1.07
TCF4-266ENST00000628689 CALML3P27482 149 aa8.38□□□□□ -1.07
TCF4-266ENST00000628689 GATMP50440 423 aa8.38□□□□□ -1.07
TCF4-266ENST00000628689 STAT2P52630 851 aa8.38□□□□□ -1.07
TCF4-266ENST00000628689 MTX1Q13505 466 aa8.38□□□□□ -1.07
TCF4-266ENST00000628689 RARS2Q5T160 578 aaKnown RBP8.38□□□□□ -1.07
TCF4-266ENST00000628689 KIAA1841Q6NSI8 718 aa8.38□□□□□ -1.07
TCF4-266ENST00000628689 XRRA1Q6P2D8 792 aa8.38□□□□□ -1.07
TCF4-266ENST00000628689 SLC30A10Q6XR72 485 aa8.38□□□□□ -1.07
TCF4-266ENST00000628689 RTN4RL1Q86UN2 441 aaPredicted RBP8.38□□□□□ -1.07
TCF4-266ENST00000628689 FAM160B2Q86V87 743 aa8.38□□□□□ -1.07
TCF4-266ENST00000628689 GMCL1P1Q8NEA9 526 aa8.38□□□□□ -1.07
TCF4-266ENST00000628689 RSAD2Q8WXG1 361 aa8.38□□□□□ -1.07
TCF4-266ENST00000628689 CHMP4CQ96CF2 233 aa8.38□□□□□ -1.07
TCF4-266ENST00000628689 ACSF2Q96CM8 615 aaPredicted RBP8.38□□□□□ -1.07
TCF4-266ENST00000628689 KCNK17Q96T54 332 aa8.38□□□□□ -1.07
TCF4-266ENST00000628689 MEIS3Q99687 375 aa8.38□□□□□ -1.07
TCF4-266ENST00000628689 FOXQ1Q9C009 403 aa8.38□□□□□ -1.07
TCF4-266ENST00000628689 ARMT1Q9H993 441 aa8.38□□□□□ -1.07
TCF4-266ENST00000628689 EHMT1Q9H9B1 1298 aa8.38□□□□□ -1.07
TCF4-266ENST00000628689 NPDC1Q9NQX5 325 aaPredicted RBP8.38□□□□□ -1.07
TCF4-266ENST00000628689 ATP8A2Q9NTI2 1148 aa8.38□□□□□ -1.07
TCF4-266ENST00000628689 SPATA6Q9NWH7 488 aaPredicted RBP8.38□□□□□ -1.07
TCF4-266ENST00000628689 TMEM260Q9NX78 707 aa8.38□□□□□ -1.07
TCF4-266ENST00000628689 DBNLQ9UJU6 430 aaKnown RBP8.38□□□□□ -1.07
TCF4-266ENST00000628689 CCPG1Q9ULG6 757 aa8.38□□□□□ -1.07
TCF4-266ENST00000628689 PTPN13Q12923 2485 aa8.38□□□□□ -1.07
TCF4-266ENST00000628689 KIAA1217Q5T5P2 1943 aa8.37□□□□□ -1.07
TCF4-266ENST00000628689 DENND4AQ7Z401 1863 aa8.37□□□□□ -1.07
TCF4-266ENST00000628689 IGKV6D-41A0A0C4DH26 115 aa8.37□□□□□ -1.07
TCF4-266ENST00000628689 C17orf102A2RUQ5 167 aa8.37□□□□□ -1.07
TCF4-266ENST00000628689 PPP1R3GB7ZBB8 358 aa8.37□□□□□ -1.07
TCF4-266ENST00000628689 LAMTOR5O43504 91 aa8.37□□□□□ -1.07
TCF4-266ENST00000628689 GHRP10912 638 aa8.37□□□□□ -1.07
TCF4-266ENST00000628689 PDE6AP16499 860 aa8.37□□□□□ -1.07
TCF4-266ENST00000628689 RASA1P20936 1047 aa8.37□□□□□ -1.07
TCF4-266ENST00000628689 HOXC8P31273 242 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms