RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 GJC2Q5T442 439 aaPredicted RBP19.93■□□□□ 0.78
PTCHD3-202ENST00000622555 KCNK18Q7Z418 384 aa19.93■□□□□ 0.78
PTCHD3-202ENST00000622555 CKAP2LQ8IYA6 745 aa19.93■□□□□ 0.78
PTCHD3-202ENST00000622555 RAD54LQ92698 747 aa19.93■□□□□ 0.78
PTCHD3-202ENST00000622555 PAGE5Q96GU1 130 aa19.93■□□□□ 0.78
PTCHD3-202ENST00000622555 BLOC1S4Q9NUP1 217 aa19.93■□□□□ 0.78
PTCHD3-202ENST00000622555 NOP56O00567 594 aaKnown RBP19.93■□□□□ 0.78
PTCHD3-202ENST00000622555 FOXN1O15353 648 aa19.93■□□□□ 0.78
PTCHD3-202ENST00000622555 SMPD1P17405 629 aa19.93■□□□□ 0.78
PTCHD3-202ENST00000622555 MUTP22033 750 aa19.93■□□□□ 0.78
PTCHD3-202ENST00000622555 QARSP47897 775 aaKnown RBP19.93■□□□□ 0.78
PTCHD3-202ENST00000622555 DUSP28Q4G0W2 176 aa19.93■□□□□ 0.78
PTCHD3-202ENST00000622555 L1TD1Q5T7N2 865 aaKnown RBP19.93■□□□□ 0.78
PTCHD3-202ENST00000622555 ABHD15Q6UXT9 468 aa19.93■□□□□ 0.78
PTCHD3-202ENST00000622555 RAET1EQ8TD07 263 aa19.93■□□□□ 0.78
PTCHD3-202ENST00000622555 LARP4BQ92615 738 aaKnown RBP19.93■□□□□ 0.78
PTCHD3-202ENST00000622555 STAMQ92783 540 aa19.93■□□□□ 0.78
PTCHD3-202ENST00000622555 SPATA33Q96N06 139 aa19.93■□□□□ 0.78
PTCHD3-202ENST00000622555 MAGEF1Q9HAY2 307 aa19.93■□□□□ 0.78
PTCHD3-202ENST00000622555 A0A087WWV3 80 aa19.92■□□□□ 0.78
PTCHD3-202ENST00000622555 E9PMD0 336 aa19.92■□□□□ 0.78
PTCHD3-202ENST00000622555 LETM1O95202 739 aaPredicted RBP19.92■□□□□ 0.78
PTCHD3-202ENST00000622555 SUPT20HL2P0C7V6 817 aa19.92■□□□□ 0.78
PTCHD3-202ENST00000622555 PTGS1P23219 599 aa19.92■□□□□ 0.78
PTCHD3-202ENST00000622555 TNFAIP2Q03169 654 aa19.92■□□□□ 0.78
PTCHD3-202ENST00000622555 ARHGAP1Q07960 439 aa19.92■□□□□ 0.78
PTCHD3-202ENST00000622555 PNOCQ13519 176 aa19.92■□□□□ 0.78
PTCHD3-202ENST00000622555 DHX8Q14562 1220 aaKnown RBP19.92■□□□□ 0.78
PTCHD3-202ENST00000622555 POSTNQ15063 836 aa19.92■□□□□ 0.78
PTCHD3-202ENST00000622555 ELOA2Q8IYF1 753 aaPredicted RBP19.92■□□□□ 0.78
PTCHD3-202ENST00000622555 ERCC4Q92889 916 aaPredicted RBP19.92■□□□□ 0.78
PTCHD3-202ENST00000622555 ZSWIM4Q9H7M6 989 aa19.92■□□□□ 0.78
PTCHD3-202ENST00000622555 WRAP73Q9P2S5 460 aaPredicted RBP19.92■□□□□ 0.78
PTCHD3-202ENST00000622555 GABBR1Q9UBS5 961 aa19.92■□□□□ 0.78
PTCHD3-202ENST00000622555 NRBP1Q9UHY1 535 aa19.92■□□□□ 0.78
PTCHD3-202ENST00000622555 DNM3Q9UQ16 869 aa19.92■□□□□ 0.78
PTCHD3-202ENST00000622555 GSTTP1A0A1W2PQM5 241 aa19.91■□□□□ 0.78
PTCHD3-202ENST00000622555 SYCE3A1L190 88 aa19.91■□□□□ 0.78
PTCHD3-202ENST00000622555 BACH1O14867 736 aa19.91■□□□□ 0.78
PTCHD3-202ENST00000622555 NKRFO15226 690 aaKnown RBP eCLIP19.91■□□□□ 0.78
PTCHD3-202ENST00000622555 ADCY3O60266 1144 aa19.91■□□□□ 0.78
PTCHD3-202ENST00000622555 ATG7O95352 703 aa19.91■□□□□ 0.78
PTCHD3-202ENST00000622555 ELNP15502 786 aa19.91■□□□□ 0.78
PTCHD3-202ENST00000622555 PSMC5P62195 406 aa19.91■□□□□ 0.78
PTCHD3-202ENST00000622555 PSMC6P62333 389 aa19.91■□□□□ 0.78
PTCHD3-202ENST00000622555 LAMC2Q13753 1193 aa19.91■□□□□ 0.78
PTCHD3-202ENST00000622555 MCM6Q14566 821 aa19.91■□□□□ 0.78
PTCHD3-202ENST00000622555 UGCGQ16739 394 aa19.91■□□□□ 0.78
PTCHD3-202ENST00000622555 SWSAP1Q6NVH7 229 aa19.91■□□□□ 0.78
PTCHD3-202ENST00000622555 SV2BQ7L1I2 683 aa19.91■□□□□ 0.78
PTCHD3-202ENST00000622555 SH3RF1Q7Z6J0 888 aa19.91■□□□□ 0.78
PTCHD3-202ENST00000622555 KCTD17Q8N5Z5 321 aa19.91■□□□□ 0.78
PTCHD3-202ENST00000622555 SEPT1Q8WYJ6 367 aa19.91■□□□□ 0.78
PTCHD3-202ENST00000622555 SSBP05455 408 aaKnown RBP eCLIP19.9■□□□□ 0.78
PTCHD3-202ENST00000622555 PRR29P0C7W0 189 aa19.9■□□□□ 0.78
PTCHD3-202ENST00000622555 MDM2Q00987 491 aaPredicted RBP19.9■□□□□ 0.78
PTCHD3-202ENST00000622555 HSDL1Q3SXM5 330 aa19.9■□□□□ 0.78
PTCHD3-202ENST00000622555 CCDC60Q8IWA6 550 aaPredicted RBP19.9■□□□□ 0.78
PTCHD3-202ENST00000622555 ATP6V0A1Q93050 837 aa19.9■□□□□ 0.78
PTCHD3-202ENST00000622555 NACC1Q96RE7 527 aa19.9■□□□□ 0.78
PTCHD3-202ENST00000622555 GPR20Q99678 358 aa19.9■□□□□ 0.78
PTCHD3-202ENST00000622555 KBTBD4Q9NVX7 518 aa19.9■□□□□ 0.78
PTCHD3-202ENST00000622555 FAM184BQ9ULE4 1060 aa19.9■□□□□ 0.78
PTCHD3-202ENST00000622555 GOLGA6L3A6NEY3 463 aa19.9■□□□□ 0.78
PTCHD3-202ENST00000622555 ADCY6O43306 1168 aa19.9■□□□□ 0.78
PTCHD3-202ENST00000622555 PLA2G4BP0C869 781 aa19.9■□□□□ 0.78
PTCHD3-202ENST00000622555 CYBAP13498 195 aa19.9■□□□□ 0.78
PTCHD3-202ENST00000622555 TCF7P36402 384 aaPredicted RBP19.9■□□□□ 0.78
PTCHD3-202ENST00000622555 PRMT2P55345 433 aa19.9■□□□□ 0.78
PTCHD3-202ENST00000622555 RBM43Q6ZSC3 357 aaKnown RBP19.9■□□□□ 0.78
PTCHD3-202ENST00000622555 OR6J1Q8NGC5 347 aa19.9■□□□□ 0.78
PTCHD3-202ENST00000622555 PIGOQ8TEQ8 1089 aa19.9■□□□□ 0.78
PTCHD3-202ENST00000622555 EMID1Q96A84 441 aaPredicted RBP19.9■□□□□ 0.78
PTCHD3-202ENST00000622555 MTRQ99707 1265 aa19.9■□□□□ 0.78
PTCHD3-202ENST00000622555 ZNF302Q9NR11 478 aa19.9■□□□□ 0.78
PTCHD3-202ENST00000622555 TRIM17Q9Y577 477 aa19.9■□□□□ 0.78
PTCHD3-202ENST00000622555 DKC1O60832 514 aaKnown RBP eCLIP19.89■□□□□ 0.77
PTCHD3-202ENST00000622555 TRIM32Q13049 653 aa19.89■□□□□ 0.77
PTCHD3-202ENST00000622555 TRPV1Q8NER1 839 aa19.89■□□□□ 0.77
PTCHD3-202ENST00000622555 GTPBP6O43824 516 aaPredicted RBP19.88■□□□□ 0.77
PTCHD3-202ENST00000622555 LYPLA2O95372 231 aa19.88■□□□□ 0.77
PTCHD3-202ENST00000622555 EYA4O95677 639 aa19.88■□□□□ 0.77
PTCHD3-202ENST00000622555 HMGCRP04035 888 aa19.88■□□□□ 0.77
PTCHD3-202ENST00000622555 AKR1A1P14550 325 aa19.88■□□□□ 0.77
PTCHD3-202ENST00000622555 CASP1P29466 404 aa19.88■□□□□ 0.77
PTCHD3-202ENST00000622555 AMPD3Q01432 767 aa19.88■□□□□ 0.77
PTCHD3-202ENST00000622555 CACNB2Q08289 660 aaPredicted RBP19.88■□□□□ 0.77
PTCHD3-202ENST00000622555 FAM160B1Q5W0V3 765 aa19.88■□□□□ 0.77
PTCHD3-202ENST00000622555 C4orf19Q8IY42 314 aa19.88■□□□□ 0.77
PTCHD3-202ENST00000622555 PPTC7Q8NI37 304 aa19.88■□□□□ 0.77
PTCHD3-202ENST00000622555 AFG1LQ8WV93 481 aa19.88■□□□□ 0.77
PTCHD3-202ENST00000622555 BLZF1Q9H2G9 400 aa19.88■□□□□ 0.77
PTCHD3-202ENST00000622555 BHMT2Q9H2M3 363 aa19.88■□□□□ 0.77
PTCHD3-202ENST00000622555 KIAA1468Q9P260 1216 aa19.88■□□□□ 0.77
PTCHD3-202ENST00000622555 IGSF9BQ9UPX0 1349 aa19.88■□□□□ 0.77
PTCHD3-202ENST00000622555 IGKV6D-21A0A0A0MT36 114 aa19.88■□□□□ 0.77
PTCHD3-202ENST00000622555 ZBTB39O15060 712 aa19.88■□□□□ 0.77
PTCHD3-202ENST00000622555 CNGA1P29973 690 aa19.88■□□□□ 0.77
PTCHD3-202ENST00000622555 UTP14CQ5TAP6 766 aaKnown RBP19.88■□□□□ 0.77
PTCHD3-202ENST00000622555 TRMT1LQ7Z2T5 733 aaKnown RBP19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms