RNA–Protein interactions for RNA: ENST00000618538.1

SEC22B-202, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

TSL 3

Gene SEC22B, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-202ENST00000618538 ERLIN1O75477 346 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 SERPINB2P05120 415 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 ATP2B4P23634 1241 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 HOXD13P35453 343 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 SCNN1DP51172 638 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 JAG1P78504 1218 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 SLC7A5Q01650 507 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 SPIRE1Q08AE8 756 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 USP17L24Q0WX57 530 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 ORC2Q13416 577 aaPredicted RBP4.78□□□□□ -1.64
SEC22B-202ENST00000618538 CCDC96Q2M329 555 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 ASPRV1Q53RT3 343 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 ARSHQ5FYA8 562 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 LCE2CQ5TA81 110 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 SOGA3Q5TF21 947 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 KLHDC7AQ5VTJ3 777 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 TAF3Q5VWG9 929 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 HAUS3Q68CZ6 603 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 USP17L6PQ6QN14 398 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 CCNI2Q6ZMN8 369 aaPredicted RBP4.78□□□□□ -1.64
SEC22B-202ENST00000618538 KCTD1Q719H9 257 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.78□□□□□ -1.64
SEC22B-202ENST00000618538 RRAGAQ7L523 313 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 SIAH1Q8IUQ4 282 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 FAM114A1Q8IWE2 563 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 TSEN2Q8NCE0 465 aaKnown RBP4.78□□□□□ -1.64
SEC22B-202ENST00000618538 SNIP1Q8TAD8 396 aaKnown RBP4.78□□□□□ -1.64
SEC22B-202ENST00000618538 OLIG1Q8TAK6 271 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 CRYGNQ8WXF5 182 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 RPGRQ92834 1020 aaKnown RBP4.78□□□□□ -1.64
SEC22B-202ENST00000618538 CCDC102AQ96A19 550 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 CALML4Q96GE6 196 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 MS4A14Q96JA4 679 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 PCMTD1Q96MG8 357 aaPredicted RBP4.78□□□□□ -1.64
SEC22B-202ENST00000618538 OSBPL9Q96SU4 736 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 PACSIN1Q9BY11 444 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 EHD4Q9H223 541 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 IKZF4Q9H2S9 585 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 KCTD10Q9H3F6 313 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 PLEKHA4Q9H4M7 779 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 MMRN2Q9H8L6 949 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 KCNQ5Q9NR82 932 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 CALCOCO1Q9P1Z2 691 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 ARIH1Q9Y4X5 557 aaPredicted RBP4.78□□□□□ -1.64
SEC22B-202ENST00000618538 ATAD5Q96QE3 1844 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 ABCB11O95342 1321 aa4.78□□□□□ -1.65
SEC22B-202ENST00000618538 PNMA6FA0A0J9YX94 578 aa4.77□□□□□ -1.65
SEC22B-202ENST00000618538 TTC24A2A3L6 582 aaPredicted RBP4.77□□□□□ -1.65
SEC22B-202ENST00000618538 SMCHD1A6NHR9 2005 aa4.77□□□□□ -1.65
SEC22B-202ENST00000618538 RBAK-RBAKDNI3L0D1 243 aa4.77□□□□□ -1.65
SEC22B-202ENST00000618538 POLRMTO00411 1230 aaKnown RBP4.77□□□□□ -1.65
SEC22B-202ENST00000618538 PPEF1O14829 653 aaPredicted RBP4.77□□□□□ -1.65
SEC22B-202ENST00000618538 TRIM66O15016 1216 aa4.77□□□□□ -1.65
SEC22B-202ENST00000618538 BUB1O43683 1085 aa4.77□□□□□ -1.65
SEC22B-202ENST00000618538 IGHA1P01876 353 aa4.77□□□□□ -1.65
SEC22B-202ENST00000618538 DNAJB2P25686 324 aa4.77□□□□□ -1.65
SEC22B-202ENST00000618538 HOXA10P31260 410 aaPredicted RBP4.77□□□□□ -1.65
SEC22B-202ENST00000618538 ACTN2P35609 894 aa4.77□□□□□ -1.65
SEC22B-202ENST00000618538 CACNB3P54284 484 aa4.77□□□□□ -1.65
SEC22B-202ENST00000618538 SNAP25P60880 206 aa4.77□□□□□ -1.65
SEC22B-202ENST00000618538 PSMC6P62333 389 aa4.77□□□□□ -1.65
SEC22B-202ENST00000618538 LRRC63Q05C16 580 aa4.77□□□□□ -1.65
SEC22B-202ENST00000618538 KIF5AQ12840 1032 aa4.77□□□□□ -1.65
SEC22B-202ENST00000618538 PDIA5Q14554 519 aa4.77□□□□□ -1.65
SEC22B-202ENST00000618538 TRADDQ15628 312 aa4.77□□□□□ -1.65
SEC22B-202ENST00000618538 HYIQ5T013 277 aa4.77□□□□□ -1.65
SEC22B-202ENST00000618538 FKBP15Q5T1M5 1219 aa4.77□□□□□ -1.65
SEC22B-202ENST00000618538 PPP4R3AQ6IN85 833 aa4.77□□□□□ -1.65
SEC22B-202ENST00000618538 APOBEC3HQ6NTF7 200 aaKnown RBP4.77□□□□□ -1.65
SEC22B-202ENST00000618538 CDC42EP5Q6NZY7 148 aa4.77□□□□□ -1.65
SEC22B-202ENST00000618538 LRRC31Q6UY01 552 aa4.77□□□□□ -1.65
SEC22B-202ENST00000618538 SLC30A10Q6XR72 485 aa4.77□□□□□ -1.65
SEC22B-202ENST00000618538 SH3BP5LQ7L8J4 393 aa4.77□□□□□ -1.65
SEC22B-202ENST00000618538 TRIM59Q8IWR1 403 aa4.77□□□□□ -1.65
SEC22B-202ENST00000618538 NELFCDQ8IXH7 590 aa4.77□□□□□ -1.65
SEC22B-202ENST00000618538 ZC3H3Q8IXZ2 948 aaKnown RBP4.77□□□□□ -1.65
SEC22B-202ENST00000618538 MMGT1Q8N4V1 131 aa4.77□□□□□ -1.65
SEC22B-202ENST00000618538 SPATA4Q8NEY3 305 aa4.77□□□□□ -1.65
SEC22B-202ENST00000618538 FAM71BQ8TC56 605 aa4.77□□□□□ -1.65
SEC22B-202ENST00000618538 SCFD1Q8WVM8 642 aa4.77□□□□□ -1.65
SEC22B-202ENST00000618538 LENG9Q96B70 501 aa4.77□□□□□ -1.65
SEC22B-202ENST00000618538 CCDC42Q96M95 316 aa4.77□□□□□ -1.65
SEC22B-202ENST00000618538 CRACR2AQ9BSW2 395 aa4.77□□□□□ -1.65
SEC22B-202ENST00000618538 GANQ9H2C0 597 aa4.77□□□□□ -1.65
SEC22B-202ENST00000618538 VIPAS39Q9H9C1 493 aa4.77□□□□□ -1.65
SEC22B-202ENST00000618538 KCNMB3Q9NPA1 279 aa4.77□□□□□ -1.65
SEC22B-202ENST00000618538 NLRC4Q9NPP4 1024 aa4.77□□□□□ -1.65
SEC22B-202ENST00000618538 JADE2Q9NQC1 790 aa4.77□□□□□ -1.65
SEC22B-202ENST00000618538 RBM12Q9NTZ6 932 aaKnown RBP4.77□□□□□ -1.65
SEC22B-202ENST00000618538 TMEM51Q9NW97 253 aa4.77□□□□□ -1.65
SEC22B-202ENST00000618538 DDX25Q9UHL0 483 aaKnown RBP4.77□□□□□ -1.65
SEC22B-202ENST00000618538 AJAP1Q9UKB5 411 aaPredicted RBP4.77□□□□□ -1.65
SEC22B-202ENST00000618538 SCN9AQ15858 1988 aa4.77□□□□□ -1.65
SEC22B-202ENST00000618538 RBBP6Q7Z6E9 1792 aaKnown RBP4.77□□□□□ -1.65
SEC22B-202ENST00000618538 A0A087X0T9 212 aa4.77□□□□□ -1.65
SEC22B-202ENST00000618538 KLRG2A4D1S0 409 aaPredicted RBP4.77□□□□□ -1.65
SEC22B-202ENST00000618538 C3orf80F5H4A9 247 aa4.77□□□□□ -1.65
SEC22B-202ENST00000618538 hCG_1984214I3L0E3 225 aa4.77□□□□□ -1.65
SEC22B-202ENST00000618538 MEIS2O14770 477 aa4.77□□□□□ -1.65
SEC22B-202ENST00000618538 OPLAHO14841 1288 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms