RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 SORBS3O60504 671 aa16.92■□□□□ 0.3
UBXN1-218ENST00000616865 PPFIA4O75335 1185 aa16.92■□□□□ 0.3
UBXN1-218ENST00000616865 LGR5O75473 907 aa16.92■□□□□ 0.3
UBXN1-218ENST00000616865 GGPS1O95749 300 aa16.92■□□□□ 0.3
UBXN1-218ENST00000616865 UBA1P22314 1058 aaKnown RBP16.92■□□□□ 0.3
UBXN1-218ENST00000616865 ADCY7P51828 1080 aa16.92■□□□□ 0.3
UBXN1-218ENST00000616865 ZNF200P98182 395 aaPredicted RBP16.92■□□□□ 0.3
UBXN1-218ENST00000616865 MKRN4PQ13434 485 aaPredicted RBP16.92■□□□□ 0.3
UBXN1-218ENST00000616865 HIC1Q14526 733 aa16.92■□□□□ 0.3
UBXN1-218ENST00000616865 CELF3Q5SZQ8 465 aaKnown RBP16.92■□□□□ 0.3
UBXN1-218ENST00000616865 IL31RAQ8NI17 732 aa16.92■□□□□ 0.3
UBXN1-218ENST00000616865 FAM122AQ96E09 287 aa16.92■□□□□ 0.3
UBXN1-218ENST00000616865 GLT8D2Q9H1C3 349 aa16.92■□□□□ 0.3
UBXN1-218ENST00000616865 BRMS1Q9HCU9 246 aa16.92■□□□□ 0.3
UBXN1-218ENST00000616865 EMSYQ7Z589 1322 aa16.92■□□□□ 0.3
UBXN1-218ENST00000616865 COL4A6Q14031 1691 aa16.91■□□□□ 0.3
UBXN1-218ENST00000616865 SMCO2A6NFE2 343 aa16.91■□□□□ 0.3
UBXN1-218ENST00000616865 GNA11P29992 359 aa16.91■□□□□ 0.3
UBXN1-218ENST00000616865 HOXA13P31271 388 aaPredicted RBP16.91■□□□□ 0.3
UBXN1-218ENST00000616865 SAFBQ15424 915 aaKnown RBP eCLIP16.91■□□□□ 0.3
UBXN1-218ENST00000616865 LARP1BQ659C4 914 aaKnown RBP16.91■□□□□ 0.3
UBXN1-218ENST00000616865 FAM117BQ6P1L5 589 aa16.91■□□□□ 0.3
UBXN1-218ENST00000616865 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.91■□□□□ 0.3
UBXN1-218ENST00000616865 SERINC5Q86VE9 423 aa16.91■□□□□ 0.3
UBXN1-218ENST00000616865 VSIG10LQ86VR7 867 aa16.91■□□□□ 0.3
UBXN1-218ENST00000616865 FAM177A1Q8N128 213 aaPredicted RBP16.91■□□□□ 0.3
UBXN1-218ENST00000616865 SAMD3Q8N6K7 520 aa16.91■□□□□ 0.3
UBXN1-218ENST00000616865 BICD2Q8TD16 824 aa16.91■□□□□ 0.3
UBXN1-218ENST00000616865 C16orf70Q9BSU1 422 aa16.91■□□□□ 0.3
UBXN1-218ENST00000616865 PSTPIP2Q9H939 334 aa16.91■□□□□ 0.3
UBXN1-218ENST00000616865 NLRC5Q86WI3 1866 aa16.9■□□□□ 0.3
UBXN1-218ENST00000616865 DOCK5Q9H7D0 1870 aa16.9■□□□□ 0.3
UBXN1-218ENST00000616865 SP2Q02086 613 aa16.9■□□□□ 0.3
UBXN1-218ENST00000616865 GUCY1B3Q02153 619 aa16.9■□□□□ 0.3
UBXN1-218ENST00000616865 GNL2Q13823 731 aaKnown RBP16.9■□□□□ 0.3
UBXN1-218ENST00000616865 DBF4BQ8NFT6 615 aa16.9■□□□□ 0.3
UBXN1-218ENST00000616865 LRFN3Q9BTN0 628 aa16.9■□□□□ 0.3
UBXN1-218ENST00000616865 UBE2ZQ9H832 354 aaPredicted RBP16.9■□□□□ 0.3
UBXN1-218ENST00000616865 RALGAPA2Q2PPJ7 1873 aa16.89■□□□□ 0.29
UBXN1-218ENST00000616865 RSPH10B2B2RC85 870 aa16.89■□□□□ 0.29
UBXN1-218ENST00000616865 GCOM1H8Y6P7 765 aaPredicted RBP16.89■□□□□ 0.29
UBXN1-218ENST00000616865 AMHP03971 560 aa16.89■□□□□ 0.29
UBXN1-218ENST00000616865 RSPH10BP0C881 870 aa16.89■□□□□ 0.29
UBXN1-218ENST00000616865 POLR2MP0CAP2 368 aa16.89■□□□□ 0.29
UBXN1-218ENST00000616865 TGFB3P10600 412 aa16.89■□□□□ 0.29
UBXN1-218ENST00000616865 CCND2P30279 289 aa16.89■□□□□ 0.29
UBXN1-218ENST00000616865 HOXC8P31273 242 aa16.89■□□□□ 0.29
UBXN1-218ENST00000616865 THPOP40225 353 aa16.89■□□□□ 0.29
UBXN1-218ENST00000616865 HTRA4P83105 476 aaPredicted RBP16.89■□□□□ 0.29
UBXN1-218ENST00000616865 TMEM31Q5JXX7 168 aa16.89■□□□□ 0.29
UBXN1-218ENST00000616865 GALNT17Q6IS24 598 aa16.89■□□□□ 0.29
UBXN1-218ENST00000616865 MYOCDQ8IZQ8 938 aa16.89■□□□□ 0.29
UBXN1-218ENST00000616865 SP7Q8TDD2 431 aaPredicted RBP16.89■□□□□ 0.29
UBXN1-218ENST00000616865 KHSRPQ92945 711 aaKnown RBP eCLIP16.89■□□□□ 0.29
UBXN1-218ENST00000616865 C17orf80Q9BSJ5 609 aa16.89■□□□□ 0.29
UBXN1-218ENST00000616865 RIC8AQ9NPQ8 531 aa16.89■□□□□ 0.29
UBXN1-218ENST00000616865 KCNJ14Q9UNX9 436 aa16.89■□□□□ 0.29
UBXN1-218ENST00000616865 INSL6Q9Y581 213 aa16.89■□□□□ 0.29
UBXN1-218ENST00000616865 ESYT2A0FGR8 921 aa16.88■□□□□ 0.29
UBXN1-218ENST00000616865 C17orf102A2RUQ5 167 aa16.88■□□□□ 0.29
UBXN1-218ENST00000616865 VPS37CA5D8V6 355 aaPredicted RBP16.88■□□□□ 0.29
UBXN1-218ENST00000616865 LGALS2P05162 132 aa16.88■□□□□ 0.29
UBXN1-218ENST00000616865 PLEKHG4Q58EX7 1191 aa16.88■□□□□ 0.29
UBXN1-218ENST00000616865 TYW1BQ6NUM6 668 aa16.88■□□□□ 0.29
UBXN1-218ENST00000616865 FBXO22Q8NEZ5 403 aa16.88■□□□□ 0.29
UBXN1-218ENST00000616865 ATP6V0A1Q93050 837 aa16.88■□□□□ 0.29
UBXN1-218ENST00000616865 ZFP91Q96JP5 570 aaPredicted RBP16.88■□□□□ 0.29
UBXN1-218ENST00000616865 IPO9Q96P70 1041 aaKnown RBP16.88■□□□□ 0.29
UBXN1-218ENST00000616865 ZMYND12Q9H0C1 365 aa16.88■□□□□ 0.29
UBXN1-218ENST00000616865 MLXIPQ9HAP2 919 aa16.88■□□□□ 0.29
UBXN1-218ENST00000616865 GJB4Q9NTQ9 266 aa16.88■□□□□ 0.29
UBXN1-218ENST00000616865 HCN4Q9Y3Q4 1203 aa16.88■□□□□ 0.29
UBXN1-218ENST00000616865 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.87■□□□□ 0.29
UBXN1-218ENST00000616865 H3BRB1 525 aa16.87■□□□□ 0.29
UBXN1-218ENST00000616865 SMIM10L2AP0DMW4 78 aa16.87■□□□□ 0.29
UBXN1-218ENST00000616865 SMIM10L2BP0DMW5 78 aa16.87■□□□□ 0.29
UBXN1-218ENST00000616865 KRT2P35908 639 aa16.87■□□□□ 0.29
UBXN1-218ENST00000616865 MCTP2Q6DN12 878 aa16.87■□□□□ 0.29
UBXN1-218ENST00000616865 MCTP1Q6DN14 999 aa16.87■□□□□ 0.29
UBXN1-218ENST00000616865 FCHSD1Q86WN1 690 aa16.87■□□□□ 0.29
UBXN1-218ENST00000616865 BLIDQ8IZY5 108 aa16.87■□□□□ 0.29
UBXN1-218ENST00000616865 REXO1Q8N1G1 1221 aaKnown RBP16.87■□□□□ 0.29
UBXN1-218ENST00000616865 FBXO18Q8NFZ0 1043 aa16.87■□□□□ 0.29
UBXN1-218ENST00000616865 PHF20Q9BVI0 1012 aa16.87■□□□□ 0.29
UBXN1-218ENST00000616865 TUT1Q9H6E5 874 aaKnown RBP16.87■□□□□ 0.29
UBXN1-218ENST00000616865 EHMT1Q9H9B1 1298 aa16.87■□□□□ 0.29
UBXN1-218ENST00000616865 CD320Q9NPF0 282 aa16.87■□□□□ 0.29
UBXN1-218ENST00000616865 C11orf16Q9NQ32 467 aa16.87■□□□□ 0.29
UBXN1-218ENST00000616865 PCDHA4Q9UN74 947 aa16.87■□□□□ 0.29
UBXN1-218ENST00000616865 ARIH1Q9Y4X5 557 aaPredicted RBP16.87■□□□□ 0.29
UBXN1-218ENST00000616865 FRMPD4Q14CM0 1322 aa16.87■□□□□ 0.29
UBXN1-218ENST00000616865 BRWD1Q9NSI6 2320 aa16.87■□□□□ 0.29
UBXN1-218ENST00000616865 SPDYE3A6NKU9 549 aa16.86■□□□□ 0.29
UBXN1-218ENST00000616865 NOP56O00567 594 aaKnown RBP16.86■□□□□ 0.29
UBXN1-218ENST00000616865 TREHO43280 583 aa16.86■□□□□ 0.29
UBXN1-218ENST00000616865 CAND2O75155 1236 aa16.86■□□□□ 0.29
UBXN1-218ENST00000616865 MMP1P03956 469 aa16.86■□□□□ 0.29
UBXN1-218ENST00000616865 PDIA4P13667 645 aaKnown RBP16.86■□□□□ 0.29
UBXN1-218ENST00000616865 UBE2SQ16763 222 aa16.86■□□□□ 0.29
UBXN1-218ENST00000616865 GNPTABQ3T906 1256 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms