RNA–Protein interactions for RNA: ENST00000614293.4

ABCA2-223, Transcript of ATP binding cassette subfamily A member 2, human

TSL 5 BASIC

Gene ABCA2, Length 8,146 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA2-223	ENST00000614293	KANSL2	Q9H9L4	492 aa		13.1	□□□□□ -0.31
ABCA2-223	ENST00000614293	DAAM1	Q9Y4D1	1078 aa		13.1	□□□□□ -0.31
ABCA2-223	ENST00000614293	EFCAB8	A8MWE9	144 aa		13.1	□□□□□ -0.31
ABCA2-223	ENST00000614293	SLC27A2	O14975	620 aa		13.1	□□□□□ -0.31
ABCA2-223	ENST00000614293	MAFG	O15525	162 aa		13.1	□□□□□ -0.31
ABCA2-223	ENST00000614293	TRAPPC3	O43617	180 aa		13.1	□□□□□ -0.31
ABCA2-223	ENST00000614293	PRDM1	O75626	825 aa		13.1	□□□□□ -0.31
ABCA2-223	ENST00000614293	ZNF75D	P51815	510 aa		13.1	□□□□□ -0.31
ABCA2-223	ENST00000614293	KBTBD3	Q8NAB2	608 aa		13.1	□□□□□ -0.31
ABCA2-223	ENST00000614293	NCLN	Q969V3	563 aa		13.1	□□□□□ -0.31
ABCA2-223	ENST00000614293	PTPRK	Q15262	1439 aa		13.09	□□□□□ -0.31
ABCA2-223	ENST00000614293	HUS1	O60921	280 aa		13.09	□□□□□ -0.31
ABCA2-223	ENST00000614293	FAM47A	Q5JRC9	791 aa		13.09	□□□□□ -0.31
ABCA2-223	ENST00000614293	C10orf76	Q5T2E6	689 aa		13.09	□□□□□ -0.31
ABCA2-223	ENST00000614293	TRIM68	Q6AZZ1	485 aa		13.09	□□□□□ -0.31
ABCA2-223	ENST00000614293	BSDC1	Q9NW68	430 aa	Predicted RBP	13.09	□□□□□ -0.31
ABCA2-223	ENST00000614293	PI4KB	Q9UBF8	816 aa		13.09	□□□□□ -0.31
ABCA2-223	ENST00000614293	SAR1B	Q9Y6B6	198 aa		13.09	□□□□□ -0.31
ABCA2-223	ENST00000614293	hCG_1984214	I3L0E3	225 aa		13.09	□□□□□ -0.31
ABCA2-223	ENST00000614293	SCN4B	Q8IWT1	228 aa		13.09	□□□□□ -0.31
ABCA2-223	ENST00000614293	SPATA16	Q9BXB7	569 aa		13.09	□□□□□ -0.31
ABCA2-223	ENST00000614293	NLRC4	Q9NPP4	1024 aa		13.09	□□□□□ -0.31
ABCA2-223	ENST00000614293	ZNF197	O14709	1029 aa		13.09	□□□□□ -0.31
ABCA2-223	ENST00000614293	U2AF2	P26368	475 aa	Known RBP eCLIP	13.09	□□□□□ -0.31	8e-6	■■■■□ 25
ABCA2-223	ENST00000614293	THEMIS2	Q5TEJ8	643 aa		13.09	□□□□□ -0.31
ABCA2-223	ENST00000614293	HAUS6	Q7Z4H7	955 aa		13.09	□□□□□ -0.31
ABCA2-223	ENST00000614293	LSM7	Q9UK45	103 aa	Known RBP	13.09	□□□□□ -0.31
ABCA2-223	ENST00000614293	ABCC2	Q92887	1545 aa		13.09	□□□□□ -0.31
ABCA2-223	ENST00000614293	CCDC78	A2IDD5	438 aa		13.09	□□□□□ -0.31
ABCA2-223	ENST00000614293	SCG2	P13521	617 aa		13.09	□□□□□ -0.31
ABCA2-223	ENST00000614293	EEF1D	P29692	281 aa	Known RBP	13.09	□□□□□ -0.31
ABCA2-223	ENST00000614293	ADAM9	Q13443	819 aa		13.09	□□□□□ -0.31
ABCA2-223	ENST00000614293	SLC9A5	Q14940	896 aa		13.09	□□□□□ -0.31
ABCA2-223	ENST00000614293	C16orf62	Q7Z3J2	963 aa		13.09	□□□□□ -0.31
ABCA2-223	ENST00000614293	ZNF654	Q8IZM8	581 aa		13.09	□□□□□ -0.31
ABCA2-223	ENST00000614293	MAP10	Q9P2G4	905 aa		13.09	□□□□□ -0.31
ABCA2-223	ENST00000614293	KIF24	Q5T7B8	1368 aa		13.09	□□□□□ -0.31
ABCA2-223	ENST00000614293	POTEB3	A0JP26	581 aa		13.09	□□□□□ -0.31
ABCA2-223	ENST00000614293	HSPD1	P10809	573 aa	Known RBP	13.09	□□□□□ -0.31
ABCA2-223	ENST00000614293	PYGB	P11216	843 aa		13.09	□□□□□ -0.31
ABCA2-223	ENST00000614293	NSUN2	Q08J23	767 aa	Known RBP eCLIP	13.09	□□□□□ -0.31
ABCA2-223	ENST00000614293	TTLL4	Q14679	1199 aa		13.09	□□□□□ -0.31
ABCA2-223	ENST00000614293	SNCB	Q16143	134 aa		13.09	□□□□□ -0.31
ABCA2-223	ENST00000614293	POTEB	Q6S5H4	581 aa		13.09	□□□□□ -0.31
ABCA2-223	ENST00000614293	PCDHB15	Q9Y5E8	787 aa		13.09	□□□□□ -0.31
ABCA2-223	ENST00000614293	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	13.09	□□□□□ -0.31
ABCA2-223	ENST00000614293	TCF3	P15923	654 aa		13.09	□□□□□ -0.31
ABCA2-223	ENST00000614293	KCNA6	P17658	529 aa		13.09	□□□□□ -0.31
ABCA2-223	ENST00000614293	RASEF	Q8IZ41	740 aa		13.09	□□□□□ -0.31
ABCA2-223	ENST00000614293	NAF1	Q96HR8	494 aa	Known RBP	13.09	□□□□□ -0.31
ABCA2-223	ENST00000614293	PCDHGB4	Q9UN71	923 aa		13.09	□□□□□ -0.31
ABCA2-223	ENST00000614293	KCNJ18	B7U540	433 aa		13.08	□□□□□ -0.31
ABCA2-223	ENST00000614293	SMARCA1	P28370	1054 aa		13.08	□□□□□ -0.31
ABCA2-223	ENST00000614293	NFX1	Q12986	1120 aa	Known RBP	13.08	□□□□□ -0.31
ABCA2-223	ENST00000614293	KCNJ12	Q14500	433 aa		13.08	□□□□□ -0.31
ABCA2-223	ENST00000614293	ZBTB41	Q5SVQ8	909 aa		13.08	□□□□□ -0.31
ABCA2-223	ENST00000614293	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	13.08	□□□□□ -0.31
ABCA2-223	ENST00000614293	ZNF653	Q96CK0	615 aa		13.08	□□□□□ -0.31
ABCA2-223	ENST00000614293	CLRN2	A0PK11	232 aa		13.08	□□□□□ -0.32
ABCA2-223	ENST00000614293	KCNA1	Q09470	495 aa		13.08	□□□□□ -0.32
ABCA2-223	ENST00000614293	NR5A1	Q13285	461 aa		13.08	□□□□□ -0.32
ABCA2-223	ENST00000614293	AK8	Q96MA6	479 aa		13.08	□□□□□ -0.32
ABCA2-223	ENST00000614293	DCTPP1	Q9H773	170 aa		13.08	□□□□□ -0.32
ABCA2-223	ENST00000614293	PACSIN2	Q9UNF0	486 aa	Predicted RBP	13.08	□□□□□ -0.32
ABCA2-223	ENST00000614293	AATK	Q6ZMQ8	1374 aa		13.08	□□□□□ -0.32
ABCA2-223	ENST00000614293	LONP1	P36776	959 aa	Known RBP	13.08	□□□□□ -0.32
ABCA2-223	ENST00000614293	FANCC	Q00597	558 aa		13.08	□□□□□ -0.32
ABCA2-223	ENST00000614293	MORC3	Q14149	939 aa		13.08	□□□□□ -0.32
ABCA2-223	ENST00000614293	STXBP2	Q15833	593 aa		13.08	□□□□□ -0.32
ABCA2-223	ENST00000614293	TTC8	Q8TAM2	541 aa		13.08	□□□□□ -0.32
ABCA2-223	ENST00000614293	AAAS	Q9NRG9	546 aa		13.08	□□□□□ -0.32
ABCA2-223	ENST00000614293	VPS41	P49754	854 aa		13.08	□□□□□ -0.32
ABCA2-223	ENST00000614293	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	13.08	□□□□□ -0.32
ABCA2-223	ENST00000614293	TAB2	Q9NYJ8	693 aa		13.08	□□□□□ -0.32
ABCA2-223	ENST00000614293	SYCE1L	A8MT33	242 aa		13.08	□□□□□ -0.32
ABCA2-223	ENST00000614293	HLA-DPA1	P20036	260 aa		13.08	□□□□□ -0.32
ABCA2-223	ENST00000614293	GUCA1A	P43080	201 aa	Predicted RBP	13.08	□□□□□ -0.32
ABCA2-223	ENST00000614293	MFN1	Q8IWA4	741 aa		13.08	□□□□□ -0.32
ABCA2-223	ENST00000614293	TTC39C	Q8N584	583 aa		13.08	□□□□□ -0.32
ABCA2-223	ENST00000614293	SP110	Q9HB58	689 aa		13.08	□□□□□ -0.32
ABCA2-223	ENST00000614293	TPX2	Q9ULW0	747 aa	Known RBP	13.08	□□□□□ -0.32
ABCA2-223	ENST00000614293	PHKB	Q93100	1093 aa		13.08	□□□□□ -0.32
ABCA2-223	ENST00000614293	DSCC1	Q9BVC3	393 aa		13.08	□□□□□ -0.32
ABCA2-223	ENST00000614293	INPP5F	Q9Y2H2	1132 aa		13.08	□□□□□ -0.32
ABCA2-223	ENST00000614293	L3MBTL1	Q9Y468	752 aa		13.08	□□□□□ -0.32
ABCA2-223	ENST00000614293		K7ERI5	159 aa		13.07	□□□□□ -0.32
ABCA2-223	ENST00000614293	COBL	O75128	1261 aa		13.07	□□□□□ -0.32
ABCA2-223	ENST00000614293	BMP3	P12645	472 aa		13.07	□□□□□ -0.32
ABCA2-223	ENST00000614293	CALN1	Q9BXU9	219 aa		13.07	□□□□□ -0.32
ABCA2-223	ENST00000614293	C6orf203	Q9P0P8	240 aa	Predicted RBP	13.07	□□□□□ -0.32
ABCA2-223	ENST00000614293	GOLGA8R	I6L899	631 aa		13.07	□□□□□ -0.32
ABCA2-223	ENST00000614293	MARK3	P27448	753 aa		13.07	□□□□□ -0.32
ABCA2-223	ENST00000614293	OOSP2	Q86WS3	158 aa		13.07	□□□□□ -0.32
ABCA2-223	ENST00000614293	TRIM33	Q9UPN9	1127 aa		13.07	□□□□□ -0.32
ABCA2-223	ENST00000614293	IGSF3	O75054	1194 aa		13.07	□□□□□ -0.32
ABCA2-223	ENST00000614293	AP1B1	Q10567	949 aa		13.07	□□□□□ -0.32
ABCA2-223	ENST00000614293	TAGAP	Q8N103	731 aa		13.07	□□□□□ -0.32
ABCA2-223	ENST00000614293	GOLGA8K	D6RF30	607 aa		13.07	□□□□□ -0.32
ABCA2-223	ENST00000614293	ERICH1	Q86X53	443 aa		13.07	□□□□□ -0.32
ABCA2-223	ENST00000614293	NXF1	Q9UBU9	619 aa	Known RBP	13.07	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms