RNA–Protein interactions for RNA: ENST00000611723.1

CLTCL1-207, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-207ENST00000611723 TRIM32Q13049 653 aa17.9■□□□□ 0.46
CLTCL1-207ENST00000611723 KARSQ15046 597 aaKnown RBP17.9■□□□□ 0.46
CLTCL1-207ENST00000611723 RRAGBQ5VZM2 374 aa17.9■□□□□ 0.46
CLTCL1-207ENST00000611723 MIS18BP1Q6P0N0 1132 aa17.9■□□□□ 0.46
CLTCL1-207ENST00000611723 IQUBQ8NA54 791 aa17.9■□□□□ 0.46
CLTCL1-207ENST00000611723 ARMC5Q96C12 935 aa17.9■□□□□ 0.46
CLTCL1-207ENST00000611723 DYDC2Q96IM9 177 aa17.9■□□□□ 0.46
CLTCL1-207ENST00000611723 SPATA33Q96N06 139 aa17.9■□□□□ 0.46
CLTCL1-207ENST00000611723 GPR20Q99678 358 aa17.9■□□□□ 0.46
CLTCL1-207ENST00000611723 PANK2Q9BZ23 570 aa17.9■□□□□ 0.46
CLTCL1-207ENST00000611723 DACT1Q9NYF0 836 aa17.9■□□□□ 0.46
CLTCL1-207ENST00000611723 RGL1Q9NZL6 768 aa17.9■□□□□ 0.46
CLTCL1-207ENST00000611723 TELO2Q9Y4R8 837 aa17.9■□□□□ 0.46
CLTCL1-207ENST00000611723 PTCH2Q9Y6C5 1203 aa17.9■□□□□ 0.46
CLTCL1-207ENST00000611723 ADCY6O43306 1168 aa17.89■□□□□ 0.45
CLTCL1-207ENST00000611723 DUSP11O75319 330 aaKnown RBP17.89■□□□□ 0.45
CLTCL1-207ENST00000611723 LGR5O75473 907 aa17.89■□□□□ 0.45
CLTCL1-207ENST00000611723 HOXD8P13378 290 aaPredicted RBP17.89■□□□□ 0.45
CLTCL1-207ENST00000611723 PRKAR2AP13861 404 aaKnown RBP17.89■□□□□ 0.45
CLTCL1-207ENST00000611723 QARSP47897 775 aaKnown RBP17.89■□□□□ 0.45
CLTCL1-207ENST00000611723 NKX3-2P78367 333 aa17.89■□□□□ 0.45
CLTCL1-207ENST00000611723 HSDL1Q3SXM5 330 aa17.89■□□□□ 0.45
CLTCL1-207ENST00000611723 NAALADL2Q58DX5 795 aa17.89■□□□□ 0.45
CLTCL1-207ENST00000611723 PPTC7Q8NI37 304 aa17.89■□□□□ 0.45
CLTCL1-207ENST00000611723 CUEDC2Q9H467 287 aa17.89■□□□□ 0.45
CLTCL1-207ENST00000611723 ZSWIM4Q9H7M6 989 aa17.89■□□□□ 0.45
CLTCL1-207ENST00000611723 DDX19AQ9NUU7 478 aaKnown RBP17.89■□□□□ 0.45
CLTCL1-207ENST00000611723 COLQQ9Y215 455 aaPredicted RBP17.89■□□□□ 0.45
CLTCL1-207ENST00000611723 SAMM50Q9Y512 469 aa17.89■□□□□ 0.45
CLTCL1-207ENST00000611723 DOCK5Q9H7D0 1870 aa17.88■□□□□ 0.45
CLTCL1-207ENST00000611723 DKC1O60832 514 aaKnown RBP eCLIP17.88■□□□□ 0.45
CLTCL1-207ENST00000611723 PPFIA4O75335 1185 aa17.88■□□□□ 0.45
CLTCL1-207ENST00000611723 SLFN14P0C7P3 912 aa17.88■□□□□ 0.45
CLTCL1-207ENST00000611723 XRCC6P12956 609 aaKnown RBP eCLIP17.88■□□□□ 0.45
CLTCL1-207ENST00000611723 PLCG1P19174 1290 aa17.88■□□□□ 0.45
CLTCL1-207ENST00000611723 PSMC5P62195 406 aa17.88■□□□□ 0.45
CLTCL1-207ENST00000611723 LONRF3Q496Y0 759 aa17.88■□□□□ 0.45
CLTCL1-207ENST00000611723 GJC2Q5T442 439 aaPredicted RBP17.88■□□□□ 0.45
CLTCL1-207ENST00000611723 C4orf19Q8IY42 314 aa17.88■□□□□ 0.45
CLTCL1-207ENST00000611723 PDILTQ8N807 584 aa17.88■□□□□ 0.45
CLTCL1-207ENST00000611723 OR6J1Q8NGC5 347 aa17.88■□□□□ 0.45
CLTCL1-207ENST00000611723 AFAP1L1Q8TED9 768 aa17.88■□□□□ 0.45
CLTCL1-207ENST00000611723 CDK5RAP3Q96JB5 506 aa17.88■□□□□ 0.45
CLTCL1-207ENST00000611723 STK17AQ9UEE5 414 aa17.88■□□□□ 0.45
CLTCL1-207ENST00000611723 KIAA1024Q9UPX6 916 aa17.88■□□□□ 0.45
CLTCL1-207ENST00000611723 MAFBQ9Y5Q3 323 aaPredicted RBP17.88■□□□□ 0.45
CLTCL1-207ENST00000611723 POTEB3A0JP26 581 aa17.87■□□□□ 0.45
CLTCL1-207ENST00000611723 A6NJR5 290 aa17.87■□□□□ 0.45
CLTCL1-207ENST00000611723 NOP56O00567 594 aaKnown RBP17.87■□□□□ 0.45
CLTCL1-207ENST00000611723 DYNC1LI2O43237 492 aaPredicted RBP17.87■□□□□ 0.45
CLTCL1-207ENST00000611723 ACTN4O43707 911 aaKnown RBP17.87■□□□□ 0.45
CLTCL1-207ENST00000611723 SORBS3O60504 671 aa17.87■□□□□ 0.45
CLTCL1-207ENST00000611723 KINO60870 393 aaKnown RBP17.87■□□□□ 0.45
CLTCL1-207ENST00000611723 MYCP01106 439 aaPredicted RBP17.87■□□□□ 0.45
CLTCL1-207ENST00000611723 INHAP05111 366 aa17.87■□□□□ 0.45
CLTCL1-207ENST00000611723 CYP4A11Q02928 519 aa17.87■□□□□ 0.45
CLTCL1-207ENST00000611723 CTTNQ14247 550 aaKnown RBP17.87■□□□□ 0.45
CLTCL1-207ENST00000611723 SWSAP1Q6NVH7 229 aa17.87■□□□□ 0.45
CLTCL1-207ENST00000611723 PDXDC2PQ6P474 469 aa17.87■□□□□ 0.45
CLTCL1-207ENST00000611723 POTEBQ6S5H4 581 aa17.87■□□□□ 0.45
CLTCL1-207ENST00000611723 KRBA2Q6ZNG9 492 aa17.87■□□□□ 0.45
CLTCL1-207ENST00000611723 PLPPR4Q7Z2D5 763 aa17.87■□□□□ 0.45
CLTCL1-207ENST00000611723 CCDC60Q8IWA6 550 aaPredicted RBP17.87■□□□□ 0.45
CLTCL1-207ENST00000611723 TPH2Q8IWU9 490 aa17.87■□□□□ 0.45
CLTCL1-207ENST00000611723 LRRC15Q8TF66 581 aa17.87■□□□□ 0.45
CLTCL1-207ENST00000611723 AFG1LQ8WV93 481 aa17.87■□□□□ 0.45
CLTCL1-207ENST00000611723 ATP6V0A1Q93050 837 aa17.87■□□□□ 0.45
CLTCL1-207ENST00000611723 DHX58Q96C10 678 aa17.87■□□□□ 0.45
CLTCL1-207ENST00000611723 NACC1Q96RE7 527 aa17.87■□□□□ 0.45
CLTCL1-207ENST00000611723 PCYT2Q99447 389 aa17.87■□□□□ 0.45
CLTCL1-207ENST00000611723 LXNQ9BS40 222 aa17.87■□□□□ 0.45
CLTCL1-207ENST00000611723 MAGEF1Q9HAY2 307 aa17.87■□□□□ 0.45
CLTCL1-207ENST00000611723 BLOC1S4Q9NUP1 217 aa17.87■□□□□ 0.45
CLTCL1-207ENST00000611723 GABBR1Q9UBS5 961 aa17.87■□□□□ 0.45
CLTCL1-207ENST00000611723 SERTAD1Q9UHV2 236 aa17.87■□□□□ 0.45
CLTCL1-207ENST00000611723 PTGS1P23219 599 aa17.86■□□□□ 0.45
CLTCL1-207ENST00000611723 CCND3P30281 292 aaPredicted RBP17.86■□□□□ 0.45
CLTCL1-207ENST00000611723 TCF7P36402 384 aaPredicted RBP17.86■□□□□ 0.45
CLTCL1-207ENST00000611723 STAT6P42226 847 aa17.86■□□□□ 0.45
CLTCL1-207ENST00000611723 GJA9P57773 515 aa17.86■□□□□ 0.45
CLTCL1-207ENST00000611723 SP4Q02446 784 aa17.86■□□□□ 0.45
CLTCL1-207ENST00000611723 ZRSR1Q15695 479 aaKnown RBP17.86■□□□□ 0.45
CLTCL1-207ENST00000611723 KANK3Q6NY19 840 aa17.86■□□□□ 0.45
CLTCL1-207ENST00000611723 SH3RF1Q7Z6J0 888 aa17.86■□□□□ 0.45
CLTCL1-207ENST00000611723 TLK2Q86UE8 772 aa17.86■□□□□ 0.45
CLTCL1-207ENST00000611723 BANK1Q8NDB2 785 aa17.86■□□□□ 0.45
CLTCL1-207ENST00000611723 CNNM3Q8NE01 707 aa17.86■□□□□ 0.45
CLTCL1-207ENST00000611723 RASSF8Q8NHQ8 419 aa17.86■□□□□ 0.45
CLTCL1-207ENST00000611723 PLIN2Q99541 437 aa17.86■□□□□ 0.45
CLTCL1-207ENST00000611723 AP5M1Q9H0R1 490 aa17.86■□□□□ 0.45
CLTCL1-207ENST00000611723 UPF3AQ9H1J1 476 aaKnown RBP17.86■□□□□ 0.45
CLTCL1-207ENST00000611723 ZNF302Q9NR11 478 aa17.86■□□□□ 0.45
CLTCL1-207ENST00000611723 WRAP73Q9P2S5 460 aaPredicted RBP17.86■□□□□ 0.45
CLTCL1-207ENST00000611723 DNM3Q9UQ16 869 aa17.86■□□□□ 0.45
CLTCL1-207ENST00000611723 STBD1O95210 358 aa17.85■□□□□ 0.45
CLTCL1-207ENST00000611723 STAT5BP51692 787 aa17.85■□□□□ 0.45
CLTCL1-207ENST00000611723 UGCGQ16739 394 aa17.85■□□□□ 0.45
CLTCL1-207ENST00000611723 WDR81Q562E7 1941 aa17.85■□□□□ 0.45
CLTCL1-207ENST00000611723 FAM160B1Q5W0V3 765 aa17.85■□□□□ 0.45
CLTCL1-207ENST00000611723 POTEGQ6S5H5 508 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms