RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 PLA2G4DQ86XP0 818 aa9.86□□□□□ -0.83
SNCA-212ENST00000611107 SEPT1Q8WYJ6 367 aa9.86□□□□□ -0.83
SNCA-212ENST00000611107 LLPHQ9BRT6 129 aaKnown RBP9.86□□□□□ -0.83
SNCA-212ENST00000611107 SH3GLB2Q9NR46 395 aa9.86□□□□□ -0.83
SNCA-212ENST00000611107 SLC9A2Q9UBY0 812 aa9.86□□□□□ -0.83
SNCA-212ENST00000611107 NFASCO94856 1347 aa9.85□□□□□ -0.83
SNCA-212ENST00000611107 IGKV6D-21A0A0A0MT36 114 aa9.85□□□□□ -0.83
SNCA-212ENST00000611107 LCHNA4D1U4 455 aa9.85□□□□□ -0.83
SNCA-212ENST00000611107 ZBBXA8MT70 800 aa9.85□□□□□ -0.83
SNCA-212ENST00000611107 ZBTB42B2RXF5 422 aa9.85□□□□□ -0.83
SNCA-212ENST00000611107 RFXAPO00287 272 aa9.85□□□□□ -0.83
SNCA-212ENST00000611107 FOSP01100 380 aaPredicted RBP9.85□□□□□ -0.83
SNCA-212ENST00000611107 CHRNA1P02708 482 aa9.85□□□□□ -0.83
SNCA-212ENST00000611107 ADGRE1Q14246 886 aa9.85□□□□□ -0.83
SNCA-212ENST00000611107 PLCB4Q15147 1175 aa9.85□□□□□ -0.83
SNCA-212ENST00000611107 ABHD15Q6UXT9 468 aa9.85□□□□□ -0.83
SNCA-212ENST00000611107 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.85□□□□□ -0.83
SNCA-212ENST00000611107 CCDC60Q8IWA6 550 aaPredicted RBP9.85□□□□□ -0.83
SNCA-212ENST00000611107 TEX2Q8IWB9 1127 aa9.85□□□□□ -0.83
SNCA-212ENST00000611107 REXO1Q8N1G1 1221 aaKnown RBP9.85□□□□□ -0.83
SNCA-212ENST00000611107 DAGLBQ8NCG7 672 aa9.85□□□□□ -0.83
SNCA-212ENST00000611107 AFAP1L1Q8TED9 768 aa9.85□□□□□ -0.83
SNCA-212ENST00000611107 CCDC12Q8WUD4 166 aaPredicted RBP9.85□□□□□ -0.83
SNCA-212ENST00000611107 ATP6V0A1Q93050 837 aa9.85□□□□□ -0.83
SNCA-212ENST00000611107 PHF20Q9BVI0 1012 aa9.85□□□□□ -0.83
SNCA-212ENST00000611107 KATNAL1Q9BW62 490 aa9.85□□□□□ -0.83
SNCA-212ENST00000611107 JPH1Q9HDC5 661 aaPredicted RBP9.85□□□□□ -0.83
SNCA-212ENST00000611107 NOD1Q9Y239 953 aa9.85□□□□□ -0.83
SNCA-212ENST00000611107 COL4A6Q14031 1691 aa9.85□□□□□ -0.83
SNCA-212ENST00000611107 ATG2AQ2TAZ0 1938 aa9.85□□□□□ -0.83
SNCA-212ENST00000611107 MYH11P35749 1972 aa9.84□□□□□ -0.83
SNCA-212ENST00000611107 REV3LO60673 3130 aa9.84□□□□□ -0.83
SNCA-212ENST00000611107 K7ELQ4 463 aaPredicted RBP9.84□□□□□ -0.83
SNCA-212ENST00000611107 MSH4O15457 936 aa9.84□□□□□ -0.83
SNCA-212ENST00000611107 SLC37A4O43826 429 aa9.84□□□□□ -0.83
SNCA-212ENST00000611107 INSRRP14616 1297 aa9.84□□□□□ -0.83
SNCA-212ENST00000611107 CIITAP33076 1130 aa9.84□□□□□ -0.83
SNCA-212ENST00000611107 THPOP40225 353 aa9.84□□□□□ -0.83
SNCA-212ENST00000611107 NLRP5P59047 1200 aa9.84□□□□□ -0.83
SNCA-212ENST00000611107 WDR5P61964 334 aaKnown RBP9.84□□□□□ -0.83
SNCA-212ENST00000611107 IGBP1P78318 339 aa9.84□□□□□ -0.83
SNCA-212ENST00000611107 HMGN5P82970 282 aaKnown RBP9.84□□□□□ -0.83
SNCA-212ENST00000611107 MGAT3Q09327 533 aa9.84□□□□□ -0.83
SNCA-212ENST00000611107 BFSP2Q13515 415 aa9.84□□□□□ -0.83
SNCA-212ENST00000611107 CUL4AQ13619 759 aa9.84□□□□□ -0.83
SNCA-212ENST00000611107 GRIK4Q16099 956 aa9.84□□□□□ -0.83
SNCA-212ENST00000611107 UGCGQ16739 394 aa9.84□□□□□ -0.83
SNCA-212ENST00000611107 PRR16Q569H4 304 aa9.84□□□□□ -0.83
SNCA-212ENST00000611107 ZNF697Q5TEC3 545 aa9.84□□□□□ -0.83
SNCA-212ENST00000611107 NIPA1Q7RTP0 329 aa9.84□□□□□ -0.83
SNCA-212ENST00000611107 BLIDQ8IZY5 108 aa9.84□□□□□ -0.83
SNCA-212ENST00000611107 FAM177A1Q8N128 213 aaPredicted RBP9.84□□□□□ -0.83
SNCA-212ENST00000611107 USP38Q8NB14 1042 aa9.84□□□□□ -0.83
SNCA-212ENST00000611107 RETREG2Q8NC44 543 aa9.84□□□□□ -0.83
SNCA-212ENST00000611107 DBF4BQ8NFT6 615 aa9.84□□□□□ -0.83
SNCA-212ENST00000611107 CAGE1Q8TC20 777 aa9.84□□□□□ -0.83
SNCA-212ENST00000611107 TBCKQ8TEA7 893 aa9.84□□□□□ -0.83
SNCA-212ENST00000611107 SNX21Q969T3 373 aa9.84□□□□□ -0.83
SNCA-212ENST00000611107 TIFAQ96CG3 184 aa9.84□□□□□ -0.83
SNCA-212ENST00000611107 FTOQ9C0B1 505 aaKnown RBP eCLIP9.84□□□□□ -0.83
SNCA-212ENST00000611107 PRDM12Q9H4Q4 367 aa9.84□□□□□ -0.83
SNCA-212ENST00000611107 ZNF576Q9H609 170 aa9.84□□□□□ -0.83
SNCA-212ENST00000611107 C6orf50Q9HD87 102 aa9.84□□□□□ -0.83
SNCA-212ENST00000611107 PRDM6Q9NQX0 595 aa9.84□□□□□ -0.83
SNCA-212ENST00000611107 PCDHA4Q9UN74 947 aa9.84□□□□□ -0.83
SNCA-212ENST00000611107 BRWD1Q9NSI6 2320 aa9.84□□□□□ -0.83
SNCA-212ENST00000611107 COL4A4P53420 1690 aaPredicted RBP9.83□□□□□ -0.84
SNCA-212ENST00000611107 EMSYQ7Z589 1322 aa9.83□□□□□ -0.84
SNCA-212ENST00000611107 MBLAC1A4D2B0 266 aaPredicted RBP9.83□□□□□ -0.84
SNCA-212ENST00000611107 IPO5O00410 1097 aaKnown RBP9.83□□□□□ -0.84
SNCA-212ENST00000611107 MAFGO15525 162 aa9.83□□□□□ -0.84
SNCA-212ENST00000611107 ZNF862O60290 1169 aa9.83□□□□□ -0.84
SNCA-212ENST00000611107 ATP2A2P16615 1042 aaKnown RBP9.83□□□□□ -0.84
SNCA-212ENST00000611107 GNA11P29992 359 aa9.83□□□□□ -0.84
SNCA-212ENST00000611107 ZNF76P36508 570 aa9.83□□□□□ -0.84
SNCA-212ENST00000611107 PPFIA1Q13136 1202 aa9.83□□□□□ -0.84
SNCA-212ENST00000611107 NR5A1Q13285 461 aa9.83□□□□□ -0.84
SNCA-212ENST00000611107 INF2Q27J81 1249 aa9.83□□□□□ -0.84
SNCA-212ENST00000611107 KRT40Q6A162 431 aa9.83□□□□□ -0.84
SNCA-212ENST00000611107 RPUSD2Q8IZ73 545 aaKnown RBP9.83□□□□□ -0.84
SNCA-212ENST00000611107 DNAJB3Q8WWF6 145 aa9.83□□□□□ -0.84
SNCA-212ENST00000611107 WASF1Q92558 559 aa9.83□□□□□ -0.84
SNCA-212ENST00000611107 TNFRSF25Q93038 417 aa9.83□□□□□ -0.84
SNCA-212ENST00000611107 CDHR1Q96JP9 859 aa9.83□□□□□ -0.84
SNCA-212ENST00000611107 GLT8D2Q9H1C3 349 aa9.83□□□□□ -0.84
SNCA-212ENST00000611107 UNC45AQ9H3U1 944 aa9.83□□□□□ -0.84
SNCA-212ENST00000611107 CERS4Q9HA82 394 aa9.83□□□□□ -0.84
SNCA-212ENST00000611107 CDHR5Q9HBB8 845 aa9.83□□□□□ -0.84
SNCA-212ENST00000611107 STXBP5LQ9Y2K9 1186 aa9.83□□□□□ -0.84
SNCA-212ENST00000611107 SLC4A7Q9Y6M7 1214 aa9.83□□□□□ -0.84
SNCA-212ENST00000611107 TTC3P53804 2025 aa9.83□□□□□ -0.84
SNCA-212ENST00000611107 SPTBN5Q9NRC6 3674 aaKnown RBP9.82□□□□□ -0.84
SNCA-212ENST00000611107 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.82□□□□□ -0.84
SNCA-212ENST00000611107 TMEM150BA6NC51 233 aa9.82□□□□□ -0.84
SNCA-212ENST00000611107 RSPH10B2B2RC85 870 aa9.82□□□□□ -0.84
SNCA-212ENST00000611107 STBD1O95210 358 aa9.82□□□□□ -0.84
SNCA-212ENST00000611107 MMP1P03956 469 aa9.82□□□□□ -0.84
SNCA-212ENST00000611107 RSPH10BP0C881 870 aa9.82□□□□□ -0.84
SNCA-212ENST00000611107 GJB2P29033 226 aa9.82□□□□□ -0.84
SNCA-212ENST00000611107 RFC2P35250 354 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms