RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 CCDC114Q96M63 670 aa24.46■■□□□ 1.51
SHANK2-220ENST00000608988 PACSIN1Q9BY11 444 aa24.46■■□□□ 1.51
SHANK2-220ENST00000608988 KCTD10Q9H3F6 313 aa24.46■■□□□ 1.51
SHANK2-220ENST00000608988 PPANQ9NQ55 473 aaKnown RBP24.46■■□□□ 1.51
SHANK2-220ENST00000608988 TTC7AQ9ULT0 858 aaPredicted RBP24.46■■□□□ 1.51
SHANK2-220ENST00000608988 PACSIN2Q9UNF0 486 aaPredicted RBP24.46■■□□□ 1.51
SHANK2-220ENST00000608988 LOC102724159A0A0B4J2E5 919 aa24.45■■□□□ 1.51
SHANK2-220ENST00000608988 POTEMA6NI47 508 aa24.45■■□□□ 1.51
SHANK2-220ENST00000608988 SART1O43290 800 aaKnown RBP24.45■■□□□ 1.51
SHANK2-220ENST00000608988 FLOT1O75955 427 aa24.45■■□□□ 1.51
SHANK2-220ENST00000608988 GFPT2O94808 682 aa24.45■■□□□ 1.51
SHANK2-220ENST00000608988 TDP2O95551 362 aa24.45■■□□□ 1.51
SHANK2-220ENST00000608988 CDK8P49336 464 aa24.45■■□□□ 1.51
SHANK2-220ENST00000608988 NEDD9Q14511 834 aa24.45■■□□□ 1.51
SHANK2-220ENST00000608988 PWP2Q15269 919 aaKnown RBP24.45■■□□□ 1.51
SHANK2-220ENST00000608988 IRF2BP2Q7Z5L9 587 aa24.45■■□□□ 1.51
SHANK2-220ENST00000608988 VPS36Q86VN1 386 aa24.45■■□□□ 1.51
SHANK2-220ENST00000608988 CACNA2D3Q8IZS8 1091 aa24.45■■□□□ 1.51
SHANK2-220ENST00000608988 ZKSCAN4Q969J2 545 aaPredicted RBP24.45■■□□□ 1.51
SHANK2-220ENST00000608988 NENFQ9UMX5 172 aa24.45■■□□□ 1.51
SHANK2-220ENST00000608988 DIS3Q9Y2L1 958 aaKnown RBP24.45■■□□□ 1.51
SHANK2-220ENST00000608988 KAT6BQ8WYB5 2073 aa24.45■■□□□ 1.5
SHANK2-220ENST00000608988 NHSQ6T4R5 1651 aa24.45■■□□□ 1.5
SHANK2-220ENST00000608988 DNA2P51530 1060 aa24.45■■□□□ 1.5
SHANK2-220ENST00000608988 TRADDQ15628 312 aa24.45■■□□□ 1.5
SHANK2-220ENST00000608988 WLSQ5T9L3 541 aa24.45■■□□□ 1.5
SHANK2-220ENST00000608988 USP17L2Q6R6M4 530 aa24.45■■□□□ 1.5
SHANK2-220ENST00000608988 GLIS3Q8NEA6 775 aa24.45■■□□□ 1.5
SHANK2-220ENST00000608988 NLRP3Q96P20 1036 aa24.45■■□□□ 1.5
SHANK2-220ENST00000608988 MTMR7Q9Y216 660 aa24.45■■□□□ 1.5
SHANK2-220ENST00000608988 NOC2LQ9Y3T9 749 aaKnown RBP24.45■■□□□ 1.5
SHANK2-220ENST00000608988 PITPNM2Q9BZ72 1349 aa24.44■■□□□ 1.5
SHANK2-220ENST00000608988 CLUL1Q15846 466 aa24.44■■□□□ 1.5
SHANK2-220ENST00000608988 GPIHBP1Q8IV16 184 aa24.44■■□□□ 1.5
SHANK2-220ENST00000608988 GPATCH11Q8N954 259 aa24.44■■□□□ 1.5
SHANK2-220ENST00000608988 SLC44A5Q8NCS7 719 aa24.44■■□□□ 1.5
SHANK2-220ENST00000608988 TPCN2Q8NHX9 752 aa24.44■■□□□ 1.5
SHANK2-220ENST00000608988 TGFBRAP1Q8WUH2 860 aa24.44■■□□□ 1.5
SHANK2-220ENST00000608988 SEC16BQ96JE7 1060 aa24.44■■□□□ 1.5
SHANK2-220ENST00000608988 NUDT12Q9BQG2 462 aa24.44■■□□□ 1.5
SHANK2-220ENST00000608988 STXBP5LQ9Y2K9 1186 aa24.44■■□□□ 1.5
SHANK2-220ENST00000608988 PLIN4Q96Q06 1357 aa24.43■■□□□ 1.5
SHANK2-220ENST00000608988 EDIL3O43854 480 aa24.43■■□□□ 1.5
SHANK2-220ENST00000608988 PTK2Q05397 1052 aa24.43■■□□□ 1.5
SHANK2-220ENST00000608988 KCNH2Q12809 1159 aa24.43■■□□□ 1.5
SHANK2-220ENST00000608988 SLC4A8Q2Y0W8 1093 aa24.43■■□□□ 1.5
SHANK2-220ENST00000608988 ANKRD20A8PQ5CZ79 823 aa24.43■■□□□ 1.5
SHANK2-220ENST00000608988 TATDN2Q93075 761 aa24.43■■□□□ 1.5
SHANK2-220ENST00000608988 KDM4CQ9H3R0 1056 aa24.43■■□□□ 1.5
SHANK2-220ENST00000608988 NAGPAQ9UK23 515 aa24.43■■□□□ 1.5
SHANK2-220ENST00000608988 FRMD3A2A2Y4 597 aa24.43■■□□□ 1.5
SHANK2-220ENST00000608988 KRIT1O00522 736 aa24.43■■□□□ 1.5
SHANK2-220ENST00000608988 KIF1CO43896 1103 aaKnown RBP24.43■■□□□ 1.5
SHANK2-220ENST00000608988 PLCG2P16885 1265 aa24.43■■□□□ 1.5
SHANK2-220ENST00000608988 SNCBQ16143 134 aa24.43■■□□□ 1.5
SHANK2-220ENST00000608988 GKAP1Q5VSY0 366 aaPredicted RBP24.43■■□□□ 1.5
SHANK2-220ENST00000608988 TMC3Q7Z5M5 1100 aa24.43■■□□□ 1.5
SHANK2-220ENST00000608988 SGSM3Q96HU1 749 aa24.43■■□□□ 1.5
SHANK2-220ENST00000608988 JPH2Q9BR39 696 aaPredicted RBP24.43■■□□□ 1.5
SHANK2-220ENST00000608988 MXD3Q9BW11 206 aa24.43■■□□□ 1.5
SHANK2-220ENST00000608988 CPVLQ9H3G5 476 aa24.43■■□□□ 1.5
SHANK2-220ENST00000608988 CENPHQ9H3R5 247 aa24.43■■□□□ 1.5
SHANK2-220ENST00000608988 COL24A1Q17RW2 1714 aa24.42■■□□□ 1.5
SHANK2-220ENST00000608988 ZPR1O75312 459 aa24.42■■□□□ 1.5
SHANK2-220ENST00000608988 ADAM9Q13443 819 aa24.42■■□□□ 1.5
SHANK2-220ENST00000608988 ODF2Q5BJF6 829 aa24.42■■□□□ 1.5
SHANK2-220ENST00000608988 DPY19L2P1Q6NXN4 242 aa24.42■■□□□ 1.5
SHANK2-220ENST00000608988 ZNF571Q7Z3V5 609 aaPredicted RBP24.42■■□□□ 1.5
SHANK2-220ENST00000608988 METTL13Q8N6R0 699 aa24.42■■□□□ 1.5
SHANK2-220ENST00000608988 SPAG5Q96R06 1193 aa24.42■■□□□ 1.5
SHANK2-220ENST00000608988 EMILIN3Q9NT22 766 aa24.42■■□□□ 1.5
SHANK2-220ENST00000608988 DDX25Q9UHL0 483 aaKnown RBP24.42■■□□□ 1.5
SHANK2-220ENST00000608988 RNASE9P60153 205 aaKnown RBP24.41■■□□□ 1.5
SHANK2-220ENST00000608988 ARID5AQ03989 594 aa24.41■■□□□ 1.5
SHANK2-220ENST00000608988 ALKBH5Q6P6C2 394 aaKnown RBP24.41■■□□□ 1.5
SHANK2-220ENST00000608988 PEX26Q7Z412 305 aa24.41■■□□□ 1.5
SHANK2-220ENST00000608988 HOOK3Q86VS8 718 aa24.41■■□□□ 1.5
SHANK2-220ENST00000608988 PARP9Q8IXQ6 854 aa24.41■■□□□ 1.5
SHANK2-220ENST00000608988 GIMAP7Q8NHV1 300 aa24.41■■□□□ 1.5
SHANK2-220ENST00000608988 SCFD1Q8WVM8 642 aa24.41■■□□□ 1.5
SHANK2-220ENST00000608988 UBLCP1Q8WVY7 318 aaPredicted RBP24.41■■□□□ 1.5
SHANK2-220ENST00000608988 TLCD1Q96CP7 247 aa24.41■■□□□ 1.5
SHANK2-220ENST00000608988 RAB17Q9H0T7 212 aa24.41■■□□□ 1.5
SHANK2-220ENST00000608988 MCM8Q9UJA3 840 aa24.41■■□□□ 1.5
SHANK2-220ENST00000608988 UTP11Q9Y3A2 253 aaKnown RBP24.41■■□□□ 1.5
SHANK2-220ENST00000608988 MYH4Q9Y623 1939 aa24.41■■□□□ 1.5
SHANK2-220ENST00000608988 PPFIA2O75334 1257 aa24.41■■□□□ 1.5
SHANK2-220ENST00000608988 DNAJC8O75937 253 aaPredicted RBP24.41■■□□□ 1.5
SHANK2-220ENST00000608988 AFPP02771 609 aaKnown RBP24.41■■□□□ 1.5
SHANK2-220ENST00000608988 H2AFZP0C0S5 128 aa24.41■■□□□ 1.5
SHANK2-220ENST00000608988 CLK2P49760 499 aaKnown RBP24.41■■□□□ 1.5
SHANK2-220ENST00000608988 XRCC4Q13426 336 aa24.41■■□□□ 1.5
SHANK2-220ENST00000608988 H2AFVQ71UI9 128 aa24.41■■□□□ 1.5
SHANK2-220ENST00000608988 CROCCP2Q86T23 111 aa24.41■■□□□ 1.5
SHANK2-220ENST00000608988 RAPGEF5Q92565 580 aa24.41■■□□□ 1.5
SHANK2-220ENST00000608988 PSMD1Q99460 953 aa24.41■■□□□ 1.5
SHANK2-220ENST00000608988 VAT1LQ9HCJ6 419 aa24.41■■□□□ 1.5
SHANK2-220ENST00000608988 HDAC9Q9UKV0 1011 aa24.41■■□□□ 1.5
SHANK2-220ENST00000608988 TRAF3IP3Q9Y228 551 aa24.41■■□□□ 1.5
SHANK2-220ENST00000608988 LEMD3Q9Y2U8 911 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms