RNA–Protein interactions for RNA: ENST00000606377.6

PAX6-231, Transcript of paired box 6, human

APPRIS P4 TSL 5 BASIC

Gene PAX6, Length 6,901 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-231	ENST00000606377	CAPS2	Q9BXY5	557 aa		10.78	□□□□□ -0.68
PAX6-231	ENST00000606377	ZNF18	P17022	549 aa		10.78	□□□□□ -0.68
PAX6-231	ENST00000606377	CCNE1	P24864	410 aa		10.78	□□□□□ -0.68
PAX6-231	ENST00000606377	KCTD16	Q68DU8	428 aa		10.78	□□□□□ -0.68
PAX6-231	ENST00000606377	JADE1	Q6IE81	842 aa		10.78	□□□□□ -0.68
PAX6-231	ENST00000606377	DGKH	Q86XP1	1220 aa		10.78	□□□□□ -0.68
PAX6-231	ENST00000606377	RNF139	Q8WU17	664 aa		10.78	□□□□□ -0.68
PAX6-231	ENST00000606377	HOXC10	Q9NYD6	342 aa		10.78	□□□□□ -0.68
PAX6-231	ENST00000606377	MYO3B	Q8WXR4	1341 aa		10.78	□□□□□ -0.68
PAX6-231	ENST00000606377	USP17L10	C9JJH3	530 aa		10.77	□□□□□ -0.68
PAX6-231	ENST00000606377	JAK3	P52333	1124 aa		10.77	□□□□□ -0.68
PAX6-231	ENST00000606377	CUL4A	Q13619	759 aa		10.77	□□□□□ -0.68
PAX6-231	ENST00000606377	SURF1	Q15526	300 aa		10.77	□□□□□ -0.68
PAX6-231	ENST00000606377	TRIP13	Q15645	432 aa	Predicted RBP	10.77	□□□□□ -0.68
PAX6-231	ENST00000606377	CDO1	Q16878	200 aa		10.77	□□□□□ -0.68
PAX6-231	ENST00000606377	HSPH1	Q92598	858 aa		10.77	□□□□□ -0.68
PAX6-231	ENST00000606377	RAB3IP	Q96QF0	476 aa	Predicted RBP	10.77	□□□□□ -0.68
PAX6-231	ENST00000606377	EPB41L5	Q9HCM4	733 aa		10.77	□□□□□ -0.68
PAX6-231	ENST00000606377	BASP1	P80723	227 aa	Known RBP	10.77	□□□□□ -0.68
PAX6-231	ENST00000606377	MMEL1	Q495T6	779 aa		10.77	□□□□□ -0.68
PAX6-231	ENST00000606377	TCP11X2	Q5H9J9	407 aa		10.77	□□□□□ -0.68
PAX6-231	ENST00000606377	CATSPER4	Q7RTX7	472 aa		10.77	□□□□□ -0.68
PAX6-231	ENST00000606377	OR6B3	Q8NGW1	331 aa		10.77	□□□□□ -0.68
PAX6-231	ENST00000606377	FAM71B	Q8TC56	605 aa		10.77	□□□□□ -0.68
PAX6-231	ENST00000606377	BCAP29	Q9UHQ4	241 aa		10.77	□□□□□ -0.68
PAX6-231	ENST00000606377	BAIAP2L1	Q9UHR4	511 aa		10.77	□□□□□ -0.68
PAX6-231	ENST00000606377	PCDHA13	Q9Y5I0	950 aa		10.77	□□□□□ -0.68
PAX6-231	ENST00000606377	ZNF521	Q96K83	1311 aa		10.77	□□□□□ -0.69
PAX6-231	ENST00000606377	KRT3	P12035	628 aa		10.77	□□□□□ -0.69
PAX6-231	ENST00000606377	CASP2	P42575	452 aa		10.77	□□□□□ -0.69
PAX6-231	ENST00000606377	ARHGAP4	P98171	946 aa		10.77	□□□□□ -0.69
PAX6-231	ENST00000606377	THNSL1	Q8IYQ7	743 aa		10.77	□□□□□ -0.69
PAX6-231	ENST00000606377	MICAL1	Q8TDZ2	1067 aa		10.77	□□□□□ -0.69
PAX6-231	ENST00000606377	TCP11	Q8WWU5	503 aa		10.77	□□□□□ -0.69
PAX6-231	ENST00000606377	NOC2L	Q9Y3T9	749 aa	Known RBP	10.77	□□□□□ -0.69
PAX6-231	ENST00000606377	DAAM1	Q9Y4D1	1078 aa		10.77	□□□□□ -0.69
PAX6-231	ENST00000606377	ARHGAP31	Q2M1Z3	1444 aa		10.77	□□□□□ -0.69
PAX6-231	ENST00000606377	PLA2R1	Q13018	1463 aa		10.77	□□□□□ -0.69
PAX6-231	ENST00000606377	USP17L15	C9J2P7	530 aa		10.77	□□□□□ -0.69
PAX6-231	ENST00000606377	USP17L13	C9JLJ4	530 aa		10.77	□□□□□ -0.69
PAX6-231	ENST00000606377	USP17L11	C9JVI0	530 aa		10.77	□□□□□ -0.69
PAX6-231	ENST00000606377	USP17L18	D6R9N7	530 aa		10.77	□□□□□ -0.69
PAX6-231	ENST00000606377	USP17L22	D6RA61	530 aa		10.77	□□□□□ -0.69
PAX6-231	ENST00000606377	USP17L17	D6RBQ6	530 aa		10.77	□□□□□ -0.69
PAX6-231	ENST00000606377	USP17L19	D6RCP7	530 aa		10.77	□□□□□ -0.69
PAX6-231	ENST00000606377	USP17L20	D6RJB6	530 aa		10.77	□□□□□ -0.69
PAX6-231	ENST00000606377	USP17L24	Q0WX57	530 aa		10.77	□□□□□ -0.69
PAX6-231	ENST00000606377	AP3B2	Q13367	1082 aa		10.77	□□□□□ -0.69
PAX6-231	ENST00000606377	TMCO4	Q5TGY1	634 aa		10.77	□□□□□ -0.69
PAX6-231	ENST00000606377	USP17L6P	Q6QN14	398 aa		10.77	□□□□□ -0.69
PAX6-231	ENST00000606377	GAS2L3	Q86XJ1	694 aa		10.77	□□□□□ -0.69
PAX6-231	ENST00000606377	CFAP36	Q96G28	342 aa		10.77	□□□□□ -0.69
PAX6-231	ENST00000606377	CEP95	Q96GE4	821 aa		10.77	□□□□□ -0.69
PAX6-231	ENST00000606377	ZWILCH	Q9H900	591 aa		10.77	□□□□□ -0.69
PAX6-231	ENST00000606377	ECEL1	O95672	775 aa		10.77	□□□□□ -0.69
PAX6-231	ENST00000606377	PLTP	P55058	493 aa		10.77	□□□□□ -0.69
PAX6-231	ENST00000606377	PTCH1	Q13635	1447 aa		10.77	□□□□□ -0.69
PAX6-231	ENST00000606377	SLC27A3	Q5K4L6	730 aa		10.77	□□□□□ -0.69
PAX6-231	ENST00000606377	CYP4F22	Q6NT55	531 aa		10.77	□□□□□ -0.69
PAX6-231	ENST00000606377	MYLK4	Q86YV6	388 aa	Predicted RBP	10.77	□□□□□ -0.69
PAX6-231	ENST00000606377	TMEM260	Q9NX78	707 aa		10.77	□□□□□ -0.69
PAX6-231	ENST00000606377	CDC23	Q9UJX2	597 aa		10.77	□□□□□ -0.69
PAX6-231	ENST00000606377	POTEM	A6NI47	508 aa		10.77	□□□□□ -0.69
PAX6-231	ENST00000606377	BAG2	O95816	211 aa		10.77	□□□□□ -0.69
PAX6-231	ENST00000606377	ELF1	P32519	619 aa		10.77	□□□□□ -0.69
PAX6-231	ENST00000606377	PRELP	P51888	382 aa		10.77	□□□□□ -0.69
PAX6-231	ENST00000606377	SEPT6	Q14141	434 aa		10.77	□□□□□ -0.69
PAX6-231	ENST00000606377	RAB44	Q7Z6P3	723 aa	Predicted RBP	10.77	□□□□□ -0.69
PAX6-231	ENST00000606377	CHMP6	Q96FZ7	201 aa		10.77	□□□□□ -0.69
PAX6-231	ENST00000606377	FAM114A2	Q9NRY5	505 aa		10.77	□□□□□ -0.69
PAX6-231	ENST00000606377	MROH7-TTC4	A0A0A0MT08	1334 aa		10.76	□□□□□ -0.69
PAX6-231	ENST00000606377	KCNQ2	O43526	872 aa		10.76	□□□□□ -0.69
PAX6-231	ENST00000606377	HEXIM1	O94992	359 aa	Known RBP	10.76	□□□□□ -0.69
PAX6-231	ENST00000606377	ALCAM	Q13740	583 aa		10.76	□□□□□ -0.69
PAX6-231	ENST00000606377	ARL6IP4	Q66PJ3	421 aa	Known RBP	10.76	□□□□□ -0.69
PAX6-231	ENST00000606377	SLFN12L	Q6IEE8	588 aa		10.76	□□□□□ -0.69
PAX6-231	ENST00000606377	ARMCX2	Q7L311	632 aa		10.76	□□□□□ -0.69
PAX6-231	ENST00000606377	ATP6V0A4	Q9HBG4	840 aa		10.76	□□□□□ -0.69
PAX6-231	ENST00000606377	RNF181	Q9P0P0	153 aa		10.76	□□□□□ -0.69
PAX6-231	ENST00000606377	UTY	O14607	1347 aa		10.76	□□□□□ -0.69
PAX6-231	ENST00000606377	ARHGEF37	A1IGU5	675 aa		10.76	□□□□□ -0.69
PAX6-231	ENST00000606377	TACO1	Q9BSH4	297 aa	Known RBP	10.76	□□□□□ -0.69
PAX6-231	ENST00000606377	NDST4	Q9H3R1	872 aa		10.76	□□□□□ -0.69
PAX6-231	ENST00000606377	CPSF1	Q10570	1443 aa	Known RBP	10.76	□□□□□ -0.69
PAX6-231	ENST00000606377	THOC5	Q13769	683 aa	Known RBP	10.76	□□□□□ -0.69
PAX6-231	ENST00000606377	PFKFB3	Q16875	520 aa	Predicted RBP	10.76	□□□□□ -0.69
PAX6-231	ENST00000606377	CEP120	Q8N960	986 aa		10.76	□□□□□ -0.69
PAX6-231	ENST00000606377	ATP6V1E2	Q96A05	226 aa		10.76	□□□□□ -0.69
PAX6-231	ENST00000606377	GCNA	Q96QF7	691 aa		10.76	□□□□□ -0.69
PAX6-231	ENST00000606377	PGRMC1	O00264	195 aa	Known RBP	10.76	□□□□□ -0.69
PAX6-231	ENST00000606377	BNIP3L	O60238	219 aa		10.76	□□□□□ -0.69
PAX6-231	ENST00000606377	TMED2	Q15363	201 aa		10.76	□□□□□ -0.69
PAX6-231	ENST00000606377	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	10.76	□□□□□ -0.69
PAX6-231	ENST00000606377	ENOX1	Q8TC92	643 aa	Known RBP	10.76	□□□□□ -0.69
PAX6-231	ENST00000606377	ZBED2	Q9BTP6	218 aa		10.76	□□□□□ -0.69
PAX6-231	ENST00000606377	PDE11A	Q9HCR9	933 aa		10.76	□□□□□ -0.69
PAX6-231	ENST00000606377	INPP5F	Q9Y2H2	1132 aa		10.76	□□□□□ -0.69
PAX6-231	ENST00000606377	ATP8A1	Q9Y2Q0	1164 aa		10.76	□□□□□ -0.69
PAX6-231	ENST00000606377	CLTCL1	P53675	1640 aa		10.76	□□□□□ -0.69
PAX6-231	ENST00000606377	LRRD1	A4D1F6	860 aa		10.76	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms