RNA–Protein interactions for RNA: ENST00000604817.2

IGHV3-29-201, Transcript of immunoglobulin heavy variable 3-29 (pseudogene), humanhuman

BASIC

Gene IGHV3-29, Length 344 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-29-201ENST00000604817 SLC26A4O43511 780 aa4.81□□□□□ -1.64
IGHV3-29-201ENST00000604817 UBOX5O94941 541 aa4.81□□□□□ -1.64
IGHV3-29-201ENST00000604817 SNUPNO95149 360 aaKnown RBP4.81□□□□□ -1.64
IGHV3-29-201ENST00000604817 HSP90AA1P07900 732 aaKnown RBP4.81□□□□□ -1.64
IGHV3-29-201ENST00000604817 CT47B1P0C2W7 299 aaPredicted RBP4.81□□□□□ -1.64
IGHV3-29-201ENST00000604817 ITIH2P19823 946 aa4.81□□□□□ -1.64
IGHV3-29-201ENST00000604817 POLR2BP30876 1174 aaKnown RBP4.81□□□□□ -1.64
IGHV3-29-201ENST00000604817 CYP2C19P33261 490 aa4.81□□□□□ -1.64
IGHV3-29-201ENST00000604817 IARSP41252 1262 aaKnown RBP4.81□□□□□ -1.64
IGHV3-29-201ENST00000604817 GJA9P57773 515 aa4.81□□□□□ -1.64
IGHV3-29-201ENST00000604817 GABREP78334 506 aa4.81□□□□□ -1.64
IGHV3-29-201ENST00000604817 ZP2Q05996 745 aa4.81□□□□□ -1.64
IGHV3-29-201ENST00000604817 IKZF1Q13422 519 aa4.81□□□□□ -1.64
IGHV3-29-201ENST00000604817 PCBP2Q15366 365 aaKnown RBP eCLIP4.81□□□□□ -1.64
IGHV3-29-201ENST00000604817 SKOR2Q2VWA4 1001 aaPredicted RBP4.81□□□□□ -1.64
IGHV3-29-201ENST00000604817 ANKRD39Q53RE8 183 aa4.81□□□□□ -1.64
IGHV3-29-201ENST00000604817 GPR158Q5T848 1215 aa4.81□□□□□ -1.64
IGHV3-29-201ENST00000604817 CCDC70Q6NSX1 233 aa4.81□□□□□ -1.64
IGHV3-29-201ENST00000604817 LETMD1Q6P1Q0 360 aa4.81□□□□□ -1.64
IGHV3-29-201ENST00000604817 CILP2Q8IUL8 1156 aa4.81□□□□□ -1.64
IGHV3-29-201ENST00000604817 IFNL2Q8IZJ0 200 aa4.81□□□□□ -1.64
IGHV3-29-201ENST00000604817 VPS37AQ8NEZ2 397 aa4.81□□□□□ -1.64
IGHV3-29-201ENST00000604817 GBP3Q9H0R5 595 aa4.81□□□□□ -1.64
IGHV3-29-201ENST00000604817 SLC12A5Q9H2X9 1139 aa4.81□□□□□ -1.64
IGHV3-29-201ENST00000604817 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.81□□□□□ -1.64
IGHV3-29-201ENST00000604817 KLHL11Q9NVR0 708 aa4.81□□□□□ -1.64
IGHV3-29-201ENST00000604817 PRR13Q9NZ81 148 aa4.81□□□□□ -1.64
IGHV3-29-201ENST00000604817 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.81□□□□□ -1.64
IGHV3-29-201ENST00000604817 LRP2BPQ9P2M1 347 aa4.81□□□□□ -1.64
IGHV3-29-201ENST00000604817 APEX2Q9UBZ4 518 aa4.81□□□□□ -1.64
IGHV3-29-201ENST00000604817 GTF2A1LQ9UNN4 478 aa4.81□□□□□ -1.64
IGHV3-29-201ENST00000604817 CEP131Q9UPN4 1083 aa4.81□□□□□ -1.64
IGHV3-29-201ENST00000604817 GIT1Q9Y2X7 761 aa4.81□□□□□ -1.64
IGHV3-29-201ENST00000604817 U3KQE9 123 aa4.81□□□□□ -1.64
IGHV3-29-201ENST00000604817 INO80Q9ULG1 1556 aaPredicted RBP4.81□□□□□ -1.64
IGHV3-29-201ENST00000604817 CCDC18Q5T9S5 1454 aa4.81□□□□□ -1.64
IGHV3-29-201ENST00000604817 CDK12Q9NYV4 1490 aaPredicted RBP4.81□□□□□ -1.64
IGHV3-29-201ENST00000604817 CASKIN1Q8WXD9 1431 aa4.8□□□□□ -1.64
IGHV3-29-201ENST00000604817 CCNB3Q8WWL7 1395 aa4.8□□□□□ -1.64
IGHV3-29-201ENST00000604817 ZNF644Q9H582 1327 aaPredicted RBP4.8□□□□□ -1.64
IGHV3-29-201ENST00000604817 TCRBV16S1A1N1A0A5B0 115 aa4.8□□□□□ -1.64
IGHV3-29-201ENST00000604817 PRRT4C9JH25 899 aa4.8□□□□□ -1.64
IGHV3-29-201ENST00000604817 ERC2O15083 957 aa4.8□□□□□ -1.64
IGHV3-29-201ENST00000604817 PMM2O15305 246 aa4.8□□□□□ -1.64
IGHV3-29-201ENST00000604817 TBX1O43435 398 aa4.8□□□□□ -1.64
IGHV3-29-201ENST00000604817 DLX3O60479 287 aa4.8□□□□□ -1.64
IGHV3-29-201ENST00000604817 NBNO60934 754 aa4.8□□□□□ -1.64
IGHV3-29-201ENST00000604817 EPHX1P07099 455 aa4.8□□□□□ -1.64
IGHV3-29-201ENST00000604817 MYBL2P10244 700 aa4.8□□□□□ -1.64
IGHV3-29-201ENST00000604817 CFPP27918 469 aa4.8□□□□□ -1.64
IGHV3-29-201ENST00000604817 ADCYAP1R1P41586 468 aa4.8□□□□□ -1.64
IGHV3-29-201ENST00000604817 ECE1P42892 770 aa4.8□□□□□ -1.64
IGHV3-29-201ENST00000604817 PPM1FP49593 454 aaPredicted RBP4.8□□□□□ -1.64
IGHV3-29-201ENST00000604817 SCNN1BP51168 640 aa4.8□□□□□ -1.64
IGHV3-29-201ENST00000604817 CHAF1AQ13111 956 aaPredicted RBP4.8□□□□□ -1.64
IGHV3-29-201ENST00000604817 ODF1Q14990 250 aa4.8□□□□□ -1.64
IGHV3-29-201ENST00000604817 ARHGAP29Q52LW3 1261 aa4.8□□□□□ -1.64
IGHV3-29-201ENST00000604817 ZNF280DQ6N043 979 aa4.8□□□□□ -1.64
IGHV3-29-201ENST00000604817 TMEM192Q8IY95 271 aa4.8□□□□□ -1.64
IGHV3-29-201ENST00000604817 TOP6BLQ8N6T0 577 aa4.8□□□□□ -1.64
IGHV3-29-201ENST00000604817 DNAJB8Q8NHS0 232 aa4.8□□□□□ -1.64
IGHV3-29-201ENST00000604817 RNF141Q8WVD5 230 aa4.8□□□□□ -1.64
IGHV3-29-201ENST00000604817 AIFM3Q96NN9 605 aa4.8□□□□□ -1.64
IGHV3-29-201ENST00000604817 HAUS7Q99871 368 aa4.8□□□□□ -1.64
IGHV3-29-201ENST00000604817 DPH2Q9BQC3 489 aaPredicted RBP4.8□□□□□ -1.64
IGHV3-29-201ENST00000604817 KLHL25Q9H0H3 589 aa4.8□□□□□ -1.64
IGHV3-29-201ENST00000604817 VTA1Q9NP79 307 aa4.8□□□□□ -1.64
IGHV3-29-201ENST00000604817 MAN1C1Q9NR34 630 aa4.8□□□□□ -1.64
IGHV3-29-201ENST00000604817 C9orf78Q9NZ63 289 aaPredicted RBP4.8□□□□□ -1.64
IGHV3-29-201ENST00000604817 LMCD1Q9NZU5 365 aa4.8□□□□□ -1.64
IGHV3-29-201ENST00000604817 RAPGEFL1Q9UHV5 662 aa4.8□□□□□ -1.64
IGHV3-29-201ENST00000604817 RCAN3Q9UKA8 241 aa4.8□□□□□ -1.64
IGHV3-29-201ENST00000604817 CTNND2Q9UQB3 1225 aa4.8□□□□□ -1.64
IGHV3-29-201ENST00000604817 LRRC9Q6ZRR7 1453 aa4.8□□□□□ -1.64
IGHV3-29-201ENST00000604817 SCAF11Q99590 1463 aaKnown RBP4.8□□□□□ -1.64
IGHV3-29-201ENST00000604817 PHLPP1O60346 1717 aa4.8□□□□□ -1.64
IGHV3-29-201ENST00000604817 BLACEA4D250 179 aa4.79□□□□□ -1.64
IGHV3-29-201ENST00000604817 ZNF891A8MT65 544 aaPredicted RBP4.79□□□□□ -1.64
IGHV3-29-201ENST00000604817 KRTAP9-7A8MTY7 169 aa4.79□□□□□ -1.64
IGHV3-29-201ENST00000604817 MT-CO1P00395 513 aa4.79□□□□□ -1.64
IGHV3-29-201ENST00000604817 LTFP02788 710 aa4.79□□□□□ -1.64
IGHV3-29-201ENST00000604817 TP53P04637 393 aaPredicted RBP4.79□□□□□ -1.64
IGHV3-29-201ENST00000604817 ASGR2P07307 311 aa4.79□□□□□ -1.64
IGHV3-29-201ENST00000604817 GLI1P08151 1106 aa4.79□□□□□ -1.64
IGHV3-29-201ENST00000604817 TSPY4P0CV99 314 aa4.79□□□□□ -1.64
IGHV3-29-201ENST00000604817 TSPY10P0CW01 314 aa4.79□□□□□ -1.64
IGHV3-29-201ENST00000604817 CCND1P24385 295 aa4.79□□□□□ -1.64
IGHV3-29-201ENST00000604817 FLT3P36888 993 aa4.79□□□□□ -1.64
IGHV3-29-201ENST00000604817 RECQLP46063 649 aaPredicted RBP4.79□□□□□ -1.64
IGHV3-29-201ENST00000604817 CLCN7P51798 805 aa4.79□□□□□ -1.64
IGHV3-29-201ENST00000604817 RBM6P78332 1123 aaKnown RBP4.79□□□□□ -1.64
IGHV3-29-201ENST00000604817 NTRK3Q16288 839 aa4.79□□□□□ -1.64
IGHV3-29-201ENST00000604817 PIK3R6Q5UE93 754 aa4.79□□□□□ -1.64
IGHV3-29-201ENST00000604817 IQSEC1Q6DN90 963 aa4.79□□□□□ -1.64
IGHV3-29-201ENST00000604817 UBE2R2Q712K3 238 aaPredicted RBP4.79□□□□□ -1.64
IGHV3-29-201ENST00000604817 UBE3DQ7Z6J8 389 aa4.79□□□□□ -1.64
IGHV3-29-201ENST00000604817 KIF18BQ86Y91 864 aa4.79□□□□□ -1.64
IGHV3-29-201ENST00000604817 CCDC144CPQ8IYA2 1237 aa4.79□□□□□ -1.64
IGHV3-29-201ENST00000604817 LRRC56Q8IYG6 542 aaPredicted RBP4.79□□□□□ -1.64
IGHV3-29-201ENST00000604817 NXPE1Q8N323 547 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms