RNA–Protein interactions for RNA: ENST00000604740.5

LAMA4-222, Transcript of laminin subunit alpha 4, human

TSL 2

Gene LAMA4, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LAMA4-222	ENST00000604740	USP51	Q70EK9	711 aa		5.98	□□□□□ -1.45
LAMA4-222	ENST00000604740	MTDH	Q86UE4	582 aa	Known RBP	5.98	□□□□□ -1.45
LAMA4-222	ENST00000604740	ZNF428	Q96B54	188 aa		5.98	□□□□□ -1.45
LAMA4-222	ENST00000604740	KATNBL1	Q9H079	304 aa		5.98	□□□□□ -1.45
LAMA4-222	ENST00000604740	SUV39H1	O43463	412 aa		5.97	□□□□□ -1.45
LAMA4-222	ENST00000604740	FOXS1	O43638	330 aa		5.97	□□□□□ -1.45
LAMA4-222	ENST00000604740	HMGA2	P52926	109 aa		5.97	□□□□□ -1.45
LAMA4-222	ENST00000604740	BTBD8	Q5XKL5	378 aa		5.97	□□□□□ -1.45
LAMA4-222	ENST00000604740	TCTN3	Q6NUS6	607 aa		5.97	□□□□□ -1.45
LAMA4-222	ENST00000604740	SH3RF2	Q8TEC5	729 aa		5.97	□□□□□ -1.45
LAMA4-222	ENST00000604740	NEIL1	Q96FI4	390 aa	Predicted RBP	5.97	□□□□□ -1.45
LAMA4-222	ENST00000604740	RIC8B	Q9NVN3	520 aa		5.97	□□□□□ -1.45
LAMA4-222	ENST00000604740	TCRBV5S4A2T	A0A5A2	114 aa		5.96	□□□□□ -1.46
LAMA4-222	ENST00000604740	ESYT3	A0FGR9	886 aa		5.96	□□□□□ -1.46
LAMA4-222	ENST00000604740	CYR61	O00622	381 aa		5.96	□□□□□ -1.46
LAMA4-222	ENST00000604740	SLPI	P03973	132 aa		5.96	□□□□□ -1.46
LAMA4-222	ENST00000604740	POLD1	P28340	1107 aa		5.96	□□□□□ -1.46
LAMA4-222	ENST00000604740	ACVRL1	P37023	503 aa		5.96	□□□□□ -1.46
LAMA4-222	ENST00000604740	RRAD	P55042	308 aa		5.96	□□□□□ -1.46
LAMA4-222	ENST00000604740	DBP	Q10586	325 aa	Predicted RBP	5.96	□□□□□ -1.46
LAMA4-222	ENST00000604740	PAK1	Q13153	545 aa		5.96	□□□□□ -1.46
LAMA4-222	ENST00000604740	TAX1BP1	Q86VP1	789 aa		5.96	□□□□□ -1.46
LAMA4-222	ENST00000604740	SPATA9	Q9BWV2	254 aa		5.96	□□□□□ -1.46
LAMA4-222	ENST00000604740	CARD11	Q9BXL7	1154 aa		5.96	□□□□□ -1.46
LAMA4-222	ENST00000604740	ARHGAP28	Q9P2N2	729 aa		5.96	□□□□□ -1.46
LAMA4-222	ENST00000604740	SRPK3	Q9UPE1	567 aa		5.96	□□□□□ -1.46
LAMA4-222	ENST00000604740	ZFR2	Q9UPR6	939 aa	Known RBP	5.96	□□□□□ -1.46
LAMA4-222	ENST00000604740	CCDC9	Q9Y3X0	531 aa	Known RBP	5.96	□□□□□ -1.46
LAMA4-222	ENST00000604740	TESMIN	Q9Y4I5	508 aa		5.96	□□□□□ -1.46
LAMA4-222	ENST00000604740	CCDC180	Q9P1Z9	1646 aa		5.96	□□□□□ -1.46
LAMA4-222	ENST00000604740	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	5.95	□□□□□ -1.46
LAMA4-222	ENST00000604740	AQP7	O14520	342 aa		5.95	□□□□□ -1.46
LAMA4-222	ENST00000604740	PTPN1	P18031	435 aa	Known RBP	5.95	□□□□□ -1.46
LAMA4-222	ENST00000604740	PRKD1	Q15139	912 aa	Predicted RBP	5.95	□□□□□ -1.46
LAMA4-222	ENST00000604740	DPP8	Q6V1X1	898 aa	Predicted RBP	5.95	□□□□□ -1.46
LAMA4-222	ENST00000604740	ARHGAP36	Q6ZRI8	547 aa		5.95	□□□□□ -1.46
LAMA4-222	ENST00000604740	SPATC1	Q76KD6	591 aa		5.95	□□□□□ -1.46
LAMA4-222	ENST00000604740	NLGN4X	Q8N0W4	816 aa		5.95	□□□□□ -1.46
LAMA4-222	ENST00000604740	ADO	Q96SZ5	270 aa		5.95	□□□□□ -1.46
LAMA4-222	ENST00000604740	CDC6	Q99741	560 aa		5.95	□□□□□ -1.46
LAMA4-222	ENST00000604740	MRI	Q9BWK5	157 aa		5.95	□□□□□ -1.46
LAMA4-222	ENST00000604740	CATSPERZ	Q9NTU4	200 aa		5.95	□□□□□ -1.46
LAMA4-222	ENST00000604740	HS3ST3A1	Q9Y663	406 aa		5.95	□□□□□ -1.46
LAMA4-222	ENST00000604740	U2SURP	O15042	1029 aa	Known RBP	5.94	□□□□□ -1.46
LAMA4-222	ENST00000604740	CUTA	O60888	179 aa		5.94	□□□□□ -1.46
LAMA4-222	ENST00000604740	KRT15	P19012	456 aa		5.94	□□□□□ -1.46
LAMA4-222	ENST00000604740	RAC3	P60763	192 aa		5.94	□□□□□ -1.46
LAMA4-222	ENST00000604740	TOP3A	Q13472	1001 aa	Predicted RBP	5.94	□□□□□ -1.46
LAMA4-222	ENST00000604740	GPR19	Q15760	415 aa		5.94	□□□□□ -1.46
LAMA4-222	ENST00000604740	WDR72	Q3MJ13	1102 aa		5.94	□□□□□ -1.46
LAMA4-222	ENST00000604740	EP400NL	Q6ZTU2	488 aa		5.94	□□□□□ -1.46
LAMA4-222	ENST00000604740	MAMDC2	Q7Z304	686 aa	Predicted RBP	5.94	□□□□□ -1.46
LAMA4-222	ENST00000604740	ZNF669	Q96BR6	464 aa	Predicted RBP	5.94	□□□□□ -1.46
LAMA4-222	ENST00000604740	ZNF341	Q9BYN7	854 aa		5.94	□□□□□ -1.46
LAMA4-222	ENST00000604740	PCDHA8	Q9Y5H6	950 aa		5.94	□□□□□ -1.46
LAMA4-222	ENST00000604740	CCDC85C	A6NKD9	419 aa		5.93	□□□□□ -1.46
LAMA4-222	ENST00000604740	FAM90A27P	A6NNH2	459 aa		5.93	□□□□□ -1.46
LAMA4-222	ENST00000604740	STK10	O94804	968 aa	Known RBP	5.93	□□□□□ -1.46
LAMA4-222	ENST00000604740	RNF151	Q2KHN1	245 aa		5.93	□□□□□ -1.46
LAMA4-222	ENST00000604740	MTERF2	Q49AM1	385 aa		5.93	□□□□□ -1.46
LAMA4-222	ENST00000604740	ZMAT1	Q5H9K5	638 aa		5.93	□□□□□ -1.46
LAMA4-222	ENST00000604740	PTRH1	Q86Y79	214 aa	Known RBP	5.93	□□□□□ -1.46
LAMA4-222	ENST00000604740	CKAP2L	Q8IYA6	745 aa		5.93	□□□□□ -1.46
LAMA4-222	ENST00000604740	FUK	Q8N0W3	1084 aa		5.93	□□□□□ -1.46
LAMA4-222	ENST00000604740	PTPRN2	Q92932	1015 aa		5.93	□□□□□ -1.46
LAMA4-222	ENST00000604740	FBXW5	Q969U6	566 aa		5.93	□□□□□ -1.46
LAMA4-222	ENST00000604740	PFDN2	Q9UHV9	154 aa		5.93	□□□□□ -1.46
LAMA4-222	ENST00000604740	OAZ3	Q9UMX2	235 aa		5.93	□□□□□ -1.46
LAMA4-222	ENST00000604740	ATP23	Q9Y6H3	246 aa		5.93	□□□□□ -1.46
LAMA4-222	ENST00000604740	TRBV23-1	A0A0A0MS06	115 aa		5.92	□□□□□ -1.46
LAMA4-222	ENST00000604740	PRAMEF25	A6NGN4	478 aa		5.92	□□□□□ -1.46
LAMA4-222	ENST00000604740	MAN2B1	O00754	1011 aa		5.92	□□□□□ -1.46
LAMA4-222	ENST00000604740	PDPK1	O15530	556 aa		5.92	□□□□□ -1.46
LAMA4-222	ENST00000604740	ADCY3	O60266	1144 aa		5.92	□□□□□ -1.46
LAMA4-222	ENST00000604740	SRGAP2C	P0DJJ0	459 aa		5.92	□□□□□ -1.46
LAMA4-222	ENST00000604740	PYGM	P11217	842 aa		5.92	□□□□□ -1.46
LAMA4-222	ENST00000604740	PDE6A	P16499	860 aa		5.92	□□□□□ -1.46
LAMA4-222	ENST00000604740	COMT	P21964	271 aa		5.92	□□□□□ -1.46
LAMA4-222	ENST00000604740	PTGS1	P23219	599 aa		5.92	□□□□□ -1.46
LAMA4-222	ENST00000604740	SUMO1	P63165	101 aa	Known RBP	5.92	□□□□□ -1.46
LAMA4-222	ENST00000604740	ST5	P78524	1137 aa		5.92	□□□□□ -1.46
LAMA4-222	ENST00000604740	GUCY1A3	Q02108	690 aa		5.92	□□□□□ -1.46
LAMA4-222	ENST00000604740	SSRP1	Q08945	709 aa	Known RBP	5.92	□□□□□ -1.46
LAMA4-222	ENST00000604740	FIGN	Q5HY92	759 aa		5.92	□□□□□ -1.46
LAMA4-222	ENST00000604740	SCUBE1	Q8IWY4	988 aa		5.92	□□□□□ -1.46
LAMA4-222	ENST00000604740	PCDH19	Q8TAB3	1148 aa		5.92	□□□□□ -1.46
LAMA4-222	ENST00000604740	IPO9	Q96P70	1041 aa	Known RBP	5.92	□□□□□ -1.46
LAMA4-222	ENST00000604740	DPYSL5	Q9BPU6	564 aa		5.92	□□□□□ -1.46
LAMA4-222	ENST00000604740	CBLC	Q9ULV8	474 aa		5.92	□□□□□ -1.46
LAMA4-222	ENST00000604740	MSRB2	Q9Y3D2	182 aa		5.92	□□□□□ -1.46
LAMA4-222	ENST00000604740	CDC14B	O60729	498 aa		5.91	□□□□□ -1.46
LAMA4-222	ENST00000604740	HMGCR	P04035	888 aa		5.91	□□□□□ -1.46
LAMA4-222	ENST00000604740	AMY2A	P04746	511 aa		5.91	□□□□□ -1.46
LAMA4-222	ENST00000604740	AMY2B	P19961	511 aa		5.91	□□□□□ -1.46
LAMA4-222	ENST00000604740	CR2	P20023	1033 aa		5.91	□□□□□ -1.46
LAMA4-222	ENST00000604740	MC4R	P32245	332 aa		5.91	□□□□□ -1.46
LAMA4-222	ENST00000604740	GJA4	P35212	333 aa		5.91	□□□□□ -1.46
LAMA4-222	ENST00000604740	ADCY8	P40145	1251 aa		5.91	□□□□□ -1.46
LAMA4-222	ENST00000604740	ETV4	P43268	484 aa		5.91	□□□□□ -1.46
LAMA4-222	ENST00000604740	RBM25	P49756	843 aa	Known RBP	5.91	□□□□□ -1.46

Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms