RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 NOC4LQ9BVI4 516 aaKnown RBP13.64□□□□□ -0.23
SHKBP1-213ENST00000597325 POLR3EQ9NVU0 708 aa13.64□□□□□ -0.23
SHKBP1-213ENST00000597325 RTEL1Q9NZ71 1219 aa13.64□□□□□ -0.23
SHKBP1-213ENST00000597325 ADD3Q9UEY8 706 aaKnown RBP13.64□□□□□ -0.23
SHKBP1-213ENST00000597325 CNPY2Q9Y2B0 182 aa13.64□□□□□ -0.23
SHKBP1-213ENST00000597325 RIF1Q5UIP0 2472 aaKnown RBP13.64□□□□□ -0.23
SHKBP1-213ENST00000597325 FRMPD4Q14CM0 1322 aa13.64□□□□□ -0.23
SHKBP1-213ENST00000597325 C19orf67A6NJJ6 358 aa13.63□□□□□ -0.23
SHKBP1-213ENST00000597325 YEATS4O95619 227 aa13.63□□□□□ -0.23
SHKBP1-213ENST00000597325 PGK2P07205 417 aa13.63□□□□□ -0.23
SHKBP1-213ENST00000597325 KCNA5P22460 613 aa13.63□□□□□ -0.23
SHKBP1-213ENST00000597325 CCND2P30279 289 aa13.63□□□□□ -0.23
SHKBP1-213ENST00000597325 MCM7P33993 719 aa13.63□□□□□ -0.23
SHKBP1-213ENST00000597325 TOB1P50616 345 aaPredicted RBP13.63□□□□□ -0.23
SHKBP1-213ENST00000597325 USP11P51784 963 aa13.63□□□□□ -0.23
SHKBP1-213ENST00000597325 NBR1Q14596 966 aa13.63□□□□□ -0.23
SHKBP1-213ENST00000597325 SF3A1Q15459 793 aaKnown RBP13.63□□□□□ -0.23
SHKBP1-213ENST00000597325 ZNF174Q15697 407 aa13.63□□□□□ -0.23
SHKBP1-213ENST00000597325 CLEC17AQ6ZS10 378 aa13.63□□□□□ -0.23
SHKBP1-213ENST00000597325 RPUSD2Q8IZ73 545 aaKnown RBP13.63□□□□□ -0.23
SHKBP1-213ENST00000597325 PCSK9Q8NBP7 692 aaKnown RBP13.63□□□□□ -0.23
SHKBP1-213ENST00000597325 SPATA32Q96LK8 384 aa13.63□□□□□ -0.23
SHKBP1-213ENST00000597325 TAAR1Q96RJ0 339 aa13.63□□□□□ -0.23
SHKBP1-213ENST00000597325 FTOQ9C0B1 505 aaKnown RBP eCLIP13.63□□□□□ -0.23
SHKBP1-213ENST00000597325 PXMP2Q9NR77 195 aa13.63□□□□□ -0.23
SHKBP1-213ENST00000597325 TFIP11Q9UBB9 837 aaKnown RBP13.63□□□□□ -0.23
SHKBP1-213ENST00000597325 PCDHB6Q9Y5E3 794 aa13.63□□□□□ -0.23
SHKBP1-213ENST00000597325 CLIC4Q9Y696 253 aa13.63□□□□□ -0.23
SHKBP1-213ENST00000597325 NEMFO60524 1076 aa13.62□□□□□ -0.23
SHKBP1-213ENST00000597325 NASPP49321 788 aaPredicted RBP13.62□□□□□ -0.23
SHKBP1-213ENST00000597325 ZP2Q05996 745 aa13.62□□□□□ -0.23
SHKBP1-213ENST00000597325 PGM5Q15124 567 aa13.62□□□□□ -0.23
SHKBP1-213ENST00000597325 PCNX4Q63HM2 1172 aa13.62□□□□□ -0.23
SHKBP1-213ENST00000597325 XRRA1Q6P2D8 792 aa13.62□□□□□ -0.23
SHKBP1-213ENST00000597325 MOXD1Q6UVY6 613 aa13.62□□□□□ -0.23
SHKBP1-213ENST00000597325 KCNG4Q8TDN1 519 aa13.62□□□□□ -0.23
SHKBP1-213ENST00000597325 VTI1AQ96AJ9 217 aa13.62□□□□□ -0.23
SHKBP1-213ENST00000597325 CHAMP1Q96JM3 812 aa13.62□□□□□ -0.23
SHKBP1-213ENST00000597325 PDCD2LQ9BRP1 358 aa13.62□□□□□ -0.23
SHKBP1-213ENST00000597325 UPF3AQ9H1J1 476 aaKnown RBP13.62□□□□□ -0.23
SHKBP1-213ENST00000597325 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.62□□□□□ -0.23
SHKBP1-213ENST00000597325 DDX25Q9UHL0 483 aaKnown RBP13.62□□□□□ -0.23
SHKBP1-213ENST00000597325 FAM184BQ9ULE4 1060 aa13.62□□□□□ -0.23
SHKBP1-213ENST00000597325 CACNA1GO43497 2377 aa13.62□□□□□ -0.23
SHKBP1-213ENST00000597325 PLXNA3P51805 1871 aa13.61□□□□□ -0.23
SHKBP1-213ENST00000597325 MYH7BA7E2Y1 1941 aa13.61□□□□□ -0.23
SHKBP1-213ENST00000597325 LCTP09848 1927 aa13.61□□□□□ -0.23
SHKBP1-213ENST00000597325 DNAJC25-GNG10A0A024R161 153 aa13.61□□□□□ -0.23
SHKBP1-213ENST00000597325 CTAGE5O15320 804 aa13.61□□□□□ -0.23
SHKBP1-213ENST00000597325 TDP2O95551 362 aa13.61□□□□□ -0.23
SHKBP1-213ENST00000597325 SNAI1O95863 264 aaPredicted RBP13.61□□□□□ -0.23
SHKBP1-213ENST00000597325 CYP3A4P08684 503 aa13.61□□□□□ -0.23
SHKBP1-213ENST00000597325 C6orf222P0C671 652 aaPredicted RBP13.61□□□□□ -0.23
SHKBP1-213ENST00000597325 MYCLP12524 364 aaPredicted RBP13.61□□□□□ -0.23
SHKBP1-213ENST00000597325 ALDH5A1P51649 535 aaPredicted RBP13.61□□□□□ -0.23
SHKBP1-213ENST00000597325 GJA9P57773 515 aa13.61□□□□□ -0.23
SHKBP1-213ENST00000597325 SETQ01105 290 aaPredicted RBP13.61□□□□□ -0.23
SHKBP1-213ENST00000597325 CNTN2Q02246 1040 aa13.61□□□□□ -0.23
SHKBP1-213ENST00000597325 PPP4R3AQ6IN85 833 aa13.61□□□□□ -0.23
SHKBP1-213ENST00000597325 BMP8AQ7Z5Y6 402 aa13.61□□□□□ -0.23
SHKBP1-213ENST00000597325 FAM133AQ8N9E0 248 aa13.61□□□□□ -0.23
SHKBP1-213ENST00000597325 PHOSPHO2Q8TCD6 241 aa13.61□□□□□ -0.23
SHKBP1-213ENST00000597325 NEK9Q8TD19 979 aa13.61□□□□□ -0.23
SHKBP1-213ENST00000597325 GDPD5Q8WTR4 605 aa13.61□□□□□ -0.23
SHKBP1-213ENST00000597325 LEO1Q8WVC0 666 aaPredicted RBP13.61□□□□□ -0.23
SHKBP1-213ENST00000597325 SCLYQ96I15 445 aa13.61□□□□□ -0.23
SHKBP1-213ENST00000597325 PURBQ96QR8 312 aaKnown RBP13.61□□□□□ -0.23
SHKBP1-213ENST00000597325 IWS1Q96ST2 819 aa13.61□□□□□ -0.23
SHKBP1-213ENST00000597325 SLC9A7Q96T83 725 aa13.61□□□□□ -0.23
SHKBP1-213ENST00000597325 PRRX2Q99811 253 aa13.61□□□□□ -0.23
SHKBP1-213ENST00000597325 LOC102724159A0A0B4J2E5 919 aa13.6□□□□□ -0.23
SHKBP1-213ENST00000597325 DDX11L8A8MPP1 907 aa13.6□□□□□ -0.23
SHKBP1-213ENST00000597325 LAD1O00515 517 aa13.6□□□□□ -0.23
SHKBP1-213ENST00000597325 WNT7AO00755 349 aa13.6□□□□□ -0.23
SHKBP1-213ENST00000597325 SPTLC2O15270 562 aa13.6□□□□□ -0.23
SHKBP1-213ENST00000597325 MARCH6O60337 910 aa13.6□□□□□ -0.23
SHKBP1-213ENST00000597325 STAM2O75886 525 aa13.6□□□□□ -0.23
SHKBP1-213ENST00000597325 KRT37O76014 449 aa13.6□□□□□ -0.23
SHKBP1-213ENST00000597325 CIITAP33076 1130 aa13.6□□□□□ -0.23
SHKBP1-213ENST00000597325 ME1P48163 572 aa13.6□□□□□ -0.23
SHKBP1-213ENST00000597325 NKX3-2P78367 333 aa13.6□□□□□ -0.23
SHKBP1-213ENST00000597325 PDE4DQ08499 809 aa13.6□□□□□ -0.23
SHKBP1-213ENST00000597325 SCN5AQ14524 2016 aa13.6□□□□□ -0.23
SHKBP1-213ENST00000597325 SLC39A14Q15043 492 aa13.6□□□□□ -0.23
SHKBP1-213ENST00000597325 PWP2Q15269 919 aaKnown RBP13.6□□□□□ -0.23
SHKBP1-213ENST00000597325 CALCRLQ16602 461 aa13.6□□□□□ -0.23
SHKBP1-213ENST00000597325 PUS10Q3MIT2 529 aaKnown RBP13.6□□□□□ -0.23
SHKBP1-213ENST00000597325 KMT2EQ8IZD2 1858 aa13.6□□□□□ -0.23
SHKBP1-213ENST00000597325 IL31RAQ8NI17 732 aa13.6□□□□□ -0.23
SHKBP1-213ENST00000597325 CRYGNQ8WXF5 182 aa13.6□□□□□ -0.23
SHKBP1-213ENST00000597325 GDPD2Q9HCC8 539 aa13.6□□□□□ -0.23
SHKBP1-213ENST00000597325 FAM86C1Q9NVL1 165 aa13.6□□□□□ -0.23
SHKBP1-213ENST00000597325 FAM186AA6NE01 2351 aa13.6□□□□□ -0.23
SHKBP1-213ENST00000597325 PTPRSQ13332 1948 aa13.6□□□□□ -0.23
SHKBP1-213ENST00000597325 GRIN2DO15399 1336 aa13.6□□□□□ -0.23
SHKBP1-213ENST00000597325 ZNF292O60281 2723 aa13.59□□□□□ -0.23
SHKBP1-213ENST00000597325 CYP3A7-CYP3A51PA0A087WV96 503 aa13.59□□□□□ -0.23
SHKBP1-213ENST00000597325 GOLGA6L4A6NEF3 574 aa13.59□□□□□ -0.23
SHKBP1-213ENST00000597325 SOWAHBA6NEL2 793 aa13.59□□□□□ -0.23
SHKBP1-213ENST00000597325 ASB14A6NK59 587 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms