RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 DYNLL1P63167 89 aaKnown RBP13.31□□□□□ -0.28
SMARCA4-217ENST00000591595 ITGB3BPQ13352 177 aaPredicted RBP13.31□□□□□ -0.28
SMARCA4-217ENST00000591595 ZNF394Q53GI3 561 aa13.31□□□□□ -0.28
SMARCA4-217ENST00000591595 THOC7Q6I9Y2 204 aaKnown RBP13.31□□□□□ -0.28
SMARCA4-217ENST00000591595 EEF2KMTQ96G04 330 aa13.31□□□□□ -0.28
SMARCA4-217ENST00000591595 LUC7LQ9NQ29 371 aaKnown RBP13.31□□□□□ -0.28
SMARCA4-217ENST00000591595 CROTQ9UKG9 612 aa13.31□□□□□ -0.28
SMARCA4-217ENST00000591595 TMED5Q9Y3A6 229 aa13.31□□□□□ -0.28
SMARCA4-217ENST00000591595 SAR1BQ9Y6B6 198 aa13.31□□□□□ -0.28
SMARCA4-217ENST00000591595 BAZ2BQ9UIF8 2168 aaKnown RBP13.31□□□□□ -0.28
SMARCA4-217ENST00000591595 GOLGA6L10A0A0M3HER8 536 aa13.31□□□□□ -0.28
SMARCA4-217ENST00000591595 ZNF233A6NK53 670 aa13.31□□□□□ -0.28
SMARCA4-217ENST00000591595 PRPF3O43395 683 aaKnown RBP13.31□□□□□ -0.28
SMARCA4-217ENST00000591595 SRGAP2O75044 1071 aa13.31□□□□□ -0.28
SMARCA4-217ENST00000591595 ERVK-24P63145 666 aa13.31□□□□□ -0.28
SMARCA4-217ENST00000591595 KIF5AQ12840 1032 aa13.31□□□□□ -0.28
SMARCA4-217ENST00000591595 ADGRA1Q86SQ6 560 aa13.31□□□□□ -0.28
SMARCA4-217ENST00000591595 ATP6V1G3Q96LB4 118 aa13.31□□□□□ -0.28
SMARCA4-217ENST00000591595 PLIN2Q99541 437 aa13.31□□□□□ -0.28
SMARCA4-217ENST00000591595 CARD9Q9H257 536 aa13.31□□□□□ -0.28
SMARCA4-217ENST00000591595 LRRC42Q9Y546 428 aa13.31□□□□□ -0.28
SMARCA4-217ENST00000591595 NQO1P15559 274 aaKnown RBP13.3□□□□□ -0.28
SMARCA4-217ENST00000591595 ATP6V1C1P21283 382 aa13.3□□□□□ -0.28
SMARCA4-217ENST00000591595 PPARDQ03181 441 aa13.3□□□□□ -0.28
SMARCA4-217ENST00000591595 CHRNDQ07001 517 aa13.3□□□□□ -0.28
SMARCA4-217ENST00000591595 CFAP58Q5T655 872 aa13.3□□□□□ -0.28
SMARCA4-217ENST00000591595 CPLX4Q7Z7G2 160 aa13.3□□□□□ -0.28
SMARCA4-217ENST00000591595 SLC4A9Q96Q91 983 aa13.3□□□□□ -0.28
SMARCA4-217ENST00000591595 TCHPQ9BT92 498 aa13.3□□□□□ -0.28
SMARCA4-217ENST00000591595 CHMP2BQ9UQN3 213 aa13.3□□□□□ -0.28
SMARCA4-217ENST00000591595 GDAQ9Y2T3 454 aa13.3□□□□□ -0.28
SMARCA4-217ENST00000591595 TNS2Q63HR2 1409 aa13.3□□□□□ -0.28
SMARCA4-217ENST00000591595 FLT3P36888 993 aa13.3□□□□□ -0.28
SMARCA4-217ENST00000591595 SEC23AQ15436 765 aa13.3□□□□□ -0.28
SMARCA4-217ENST00000591595 FAM47AQ5JRC9 791 aa13.3□□□□□ -0.28
SMARCA4-217ENST00000591595 SHISA4Q96DD7 197 aa13.3□□□□□ -0.28
SMARCA4-217ENST00000591595 CLMNQ96JQ2 1002 aa13.3□□□□□ -0.28
SMARCA4-217ENST00000591595 TAOK3Q9H2K8 898 aa13.3□□□□□ -0.28
SMARCA4-217ENST00000591595 EFR3BQ9Y2G0 817 aa13.3□□□□□ -0.28
SMARCA4-217ENST00000591595 HMGB1P1B2RPK0 211 aaPredicted RBP13.29□□□□□ -0.28
SMARCA4-217ENST00000591595 USP17L12C9JPN9 530 aa13.29□□□□□ -0.28
SMARCA4-217ENST00000591595 USP17L21D6R901 530 aa13.29□□□□□ -0.28
SMARCA4-217ENST00000591595 SEMA3EO15041 775 aa13.29□□□□□ -0.28
SMARCA4-217ENST00000591595 ATP9BO43861 1147 aa13.29□□□□□ -0.28
SMARCA4-217ENST00000591595 MMEP08473 750 aa13.29□□□□□ -0.28
SMARCA4-217ENST00000591595 GSTA2P09210 222 aa13.29□□□□□ -0.28
SMARCA4-217ENST00000591595 IDO1P14902 403 aa13.29□□□□□ -0.28
SMARCA4-217ENST00000591595 XDHP47989 1333 aa13.29□□□□□ -0.28
SMARCA4-217ENST00000591595 RCAN1P53805 252 aa13.29□□□□□ -0.28
SMARCA4-217ENST00000591595 KCNJ2P63252 427 aa13.29□□□□□ -0.28
SMARCA4-217ENST00000591595 NUP188Q5SRE5 1749 aa13.29□□□□□ -0.28
SMARCA4-217ENST00000591595 RC3H1Q5TC82 1133 aaKnown RBP13.29□□□□□ -0.28
SMARCA4-217ENST00000591595 TMEM53Q6P2H8 277 aa13.29□□□□□ -0.28
SMARCA4-217ENST00000591595 PALB2Q86YC2 1186 aa13.29□□□□□ -0.28
SMARCA4-217ENST00000591595 ABHD8Q96I13 439 aa13.29□□□□□ -0.28
SMARCA4-217ENST00000591595 CHP1Q99653 195 aa13.29□□□□□ -0.28
SMARCA4-217ENST00000591595 TUBA8Q9NY65 449 aaPredicted RBP13.29□□□□□ -0.28
SMARCA4-217ENST00000591595 TRIM10Q9UDY6 481 aa13.29□□□□□ -0.28
SMARCA4-217ENST00000591595 NIP7Q9Y221 180 aaKnown RBP eCLIP13.29□□□□□ -0.28
SMARCA4-217ENST00000591595 R3HDM2Q9Y2K5 976 aaKnown RBP13.29□□□□□ -0.28
SMARCA4-217ENST00000591595 LUC7L2Q9Y383 392 aaKnown RBP13.29□□□□□ -0.28
SMARCA4-217ENST00000591595 EPN1Q9Y6I3 576 aaPredicted RBP13.29□□□□□ -0.28
SMARCA4-217ENST00000591595 COL5A2P05997 1499 aaPredicted RBP13.29□□□□□ -0.28
SMARCA4-217ENST00000591595 PBX1P40424 430 aa13.29□□□□□ -0.28
SMARCA4-217ENST00000591595 TCP11X2Q5H9J9 407 aa13.29□□□□□ -0.28
SMARCA4-217ENST00000591595 SH3RF1Q7Z6J0 888 aa13.29□□□□□ -0.28
SMARCA4-217ENST00000591595 TRIM50Q86XT4 487 aa13.29□□□□□ -0.28
SMARCA4-217ENST00000591595 ARHGAP18Q8N392 663 aa13.29□□□□□ -0.28
SMARCA4-217ENST00000591595 RMND1Q9NWS8 449 aa13.29□□□□□ -0.28
SMARCA4-217ENST00000591595 BTG4Q9NY30 223 aa13.29□□□□□ -0.28
SMARCA4-217ENST00000591595 MAGEC2Q9UBF1 373 aaPredicted RBP13.29□□□□□ -0.28
SMARCA4-217ENST00000591595 ITGB1BP2Q9UKP3 347 aa13.29□□□□□ -0.28
SMARCA4-217ENST00000591595 COL18A1P39060 1754 aa13.29□□□□□ -0.28
SMARCA4-217ENST00000591595 PKD1L3Q7Z443 1732 aa13.29□□□□□ -0.28
SMARCA4-217ENST00000591595 RNF225M0QZC1 329 aaPredicted RBP13.29□□□□□ -0.28
SMARCA4-217ENST00000591595 NMT2O60551 498 aa13.29□□□□□ -0.28
SMARCA4-217ENST00000591595 LDHAP00338 332 aaKnown RBP13.29□□□□□ -0.28
SMARCA4-217ENST00000591595 CALM1P0DP23 149 aa13.29□□□□□ -0.28
SMARCA4-217ENST00000591595 CALM2P0DP24 149 aa13.29□□□□□ -0.28
SMARCA4-217ENST00000591595 CALM3P0DP25 149 aa13.29□□□□□ -0.28
SMARCA4-217ENST00000591595 PSMC1P62191 440 aaKnown RBP13.29□□□□□ -0.28
SMARCA4-217ENST00000591595 PAK2Q13177 524 aa13.29□□□□□ -0.28
SMARCA4-217ENST00000591595 FKBP15Q5T1M5 1219 aa13.29□□□□□ -0.28
SMARCA4-217ENST00000591595 PPP1R14BQ96C90 147 aa13.29□□□□□ -0.28
SMARCA4-217ENST00000591595 TRIM47Q96LD4 638 aa13.29□□□□□ -0.28
SMARCA4-217ENST00000591595 SCOCQ9UIL1 159 aa13.29□□□□□ -0.28
SMARCA4-217ENST00000591595 DYTNA2CJ06 578 aa13.28□□□□□ -0.28
SMARCA4-217ENST00000591595 TRIM49BA6NDI0 452 aa13.28□□□□□ -0.28
SMARCA4-217ENST00000591595 GTPBP6O43824 516 aaPredicted RBP13.28□□□□□ -0.28
SMARCA4-217ENST00000591595 RPN1P04843 607 aaKnown RBP13.28□□□□□ -0.28
SMARCA4-217ENST00000591595 IL6STP40189 918 aaPredicted RBP13.28□□□□□ -0.28
SMARCA4-217ENST00000591595 ATP11AP98196 1134 aa13.28□□□□□ -0.28
SMARCA4-217ENST00000591595 MCL1Q07820 350 aa13.28□□□□□ -0.28
SMARCA4-217ENST00000591595 RCN1Q15293 331 aa13.28□□□□□ -0.28
SMARCA4-217ENST00000591595 SLC44A4Q53GD3 710 aa13.28□□□□□ -0.28
SMARCA4-217ENST00000591595 CCDC122Q5T0U0 273 aa13.28□□□□□ -0.28
SMARCA4-217ENST00000591595 ZNF554Q86TJ5 538 aa13.28□□□□□ -0.28
SMARCA4-217ENST00000591595 UHMK1Q8TAS1 419 aaKnown RBP13.28□□□□□ -0.28
SMARCA4-217ENST00000591595 PPP2R3CQ969Q6 453 aa13.28□□□□□ -0.28
SMARCA4-217ENST00000591595 CCDC43Q96MW1 224 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms