RNA–Protein interactions for RNA: ENST00000591075.1

NPC1-211, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 809 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-211ENST00000591075 DTNBO60941 627 aa9.99□□□□□ -0.81
NPC1-211ENST00000591075 SLC34A2O95436 690 aa9.99□□□□□ -0.81
NPC1-211ENST00000591075 OR52Z1P0C646 297 aa9.99□□□□□ -0.81
NPC1-211ENST00000591075 SUPT20HL2P0C7V6 817 aa9.99□□□□□ -0.81
NPC1-211ENST00000591075 NKX3-2P78367 333 aa9.99□□□□□ -0.81
NPC1-211ENST00000591075 FPGSQ05932 587 aa9.99□□□□□ -0.81
NPC1-211ENST00000591075 ZNF174Q15697 407 aa9.99□□□□□ -0.81
NPC1-211ENST00000591075 LY6KQ17RY6 165 aa9.99□□□□□ -0.81
NPC1-211ENST00000591075 FAM173BQ6P4H8 233 aa9.99□□□□□ -0.81
NPC1-211ENST00000591075 CCDC73Q6ZRK6 1079 aa9.99□□□□□ -0.81
NPC1-211ENST00000591075 SH3RF1Q7Z6J0 888 aa9.99□□□□□ -0.81
NPC1-211ENST00000591075 NLRX1Q86UT6 975 aa9.99□□□□□ -0.81
NPC1-211ENST00000591075 DHX37Q8IY37 1157 aaKnown RBP9.99□□□□□ -0.81
NPC1-211ENST00000591075 TMEM199Q8N511 208 aa9.99□□□□□ -0.81
NPC1-211ENST00000591075 COPS5Q92905 334 aa9.99□□□□□ -0.81
NPC1-211ENST00000591075 TRIM43Q96BQ3 446 aaPredicted RBP9.99□□□□□ -0.81
NPC1-211ENST00000591075 TIGD1Q96MW7 591 aa9.99□□□□□ -0.81
NPC1-211ENST00000591075 PDCD2LQ9BRP1 358 aa9.99□□□□□ -0.81
NPC1-211ENST00000591075 MLXIPQ9HAP2 919 aa9.99□□□□□ -0.81
NPC1-211ENST00000591075 COL20A1Q9P218 1284 aa9.99□□□□□ -0.81
NPC1-211ENST00000591075 DDX25Q9UHL0 483 aaKnown RBP9.99□□□□□ -0.81
NPC1-211ENST00000591075 PCDHA7Q9UN72 937 aa9.99□□□□□ -0.81
NPC1-211ENST00000591075 FRMPD4Q14CM0 1322 aa9.99□□□□□ -0.81
NPC1-211ENST00000591075 MYH7BA7E2Y1 1941 aa9.99□□□□□ -0.81
NPC1-211ENST00000591075 ALPK3Q96L96 1907 aa9.98□□□□□ -0.81
NPC1-211ENST00000591075 KIAA0355O15063 1070 aa9.98□□□□□ -0.81
NPC1-211ENST00000591075 TIMP1P01033 207 aa9.98□□□□□ -0.81
NPC1-211ENST00000591075 ATP2B1P20020 1258 aa9.98□□□□□ -0.81
NPC1-211ENST00000591075 MUTP22033 750 aa9.98□□□□□ -0.81
NPC1-211ENST00000591075 PTGS1P23219 599 aa9.98□□□□□ -0.81
NPC1-211ENST00000591075 MCM7P33993 719 aa9.98□□□□□ -0.81
NPC1-211ENST00000591075 PSMC6P62333 389 aa9.98□□□□□ -0.81
NPC1-211ENST00000591075 CEBPZQ03701 1054 aaKnown RBP9.98□□□□□ -0.81
NPC1-211ENST00000591075 FAAP100Q0VG06 881 aa9.98□□□□□ -0.81
NPC1-211ENST00000591075 SEMA3FQ13275 785 aa9.98□□□□□ -0.81
NPC1-211ENST00000591075 PPIGQ13427 754 aaKnown RBP eCLIP9.98□□□□□ -0.812e-9■■□□□ 11.5
NPC1-211ENST00000591075 LAMC2Q13753 1193 aa9.98□□□□□ -0.81
NPC1-211ENST00000591075 PGM5Q15124 567 aa9.98□□□□□ -0.81
NPC1-211ENST00000591075 CALCRLQ16602 461 aa9.98□□□□□ -0.81
NPC1-211ENST00000591075 DGKDQ16760 1214 aa9.98□□□□□ -0.81
NPC1-211ENST00000591075 UBE2SQ16763 222 aa9.98□□□□□ -0.81
NPC1-211ENST00000591075 FOXD4L6Q3SYB3 417 aaPredicted RBP9.98□□□□□ -0.81
NPC1-211ENST00000591075 CEP55Q53EZ4 464 aa9.98□□□□□ -0.81
NPC1-211ENST00000591075 EARS2Q5JPH6 523 aaKnown RBP9.98□□□□□ -0.81
NPC1-211ENST00000591075 FOXD4L3Q6VB84 417 aaPredicted RBP9.98□□□□□ -0.81
NPC1-211ENST00000591075 VSIG10LQ86VR7 867 aa9.98□□□□□ -0.81
NPC1-211ENST00000591075 C4orf32Q8N8J7 132 aa9.98□□□□□ -0.81
NPC1-211ENST00000591075 GIMAP8Q8ND71 665 aaPredicted RBP9.98□□□□□ -0.81
NPC1-211ENST00000591075 RASGRP4Q8TDF6 673 aa9.98□□□□□ -0.81
NPC1-211ENST00000591075 AFG1LQ8WV93 481 aa9.98□□□□□ -0.81
NPC1-211ENST00000591075 MRPS27Q92552 414 aaKnown RBP9.98□□□□□ -0.81
NPC1-211ENST00000591075 PPP1R12CQ9BZL4 782 aa9.98□□□□□ -0.81
NPC1-211ENST00000591075 PRO3102Q9H379 93 aa9.98□□□□□ -0.81
NPC1-211ENST00000591075 DDX19AQ9NUU7 478 aaKnown RBP9.98□□□□□ -0.81
NPC1-211ENST00000591075 CCDC39Q9UFE4 941 aa9.98□□□□□ -0.81
NPC1-211ENST00000591075 MEIS1O00470 390 aa9.97□□□□□ -0.81
NPC1-211ENST00000591075 NOP56O00567 594 aaKnown RBP9.97□□□□□ -0.81
NPC1-211ENST00000591075 ARIH2O95376 493 aa9.97□□□□□ -0.81
NPC1-211ENST00000591075 TGFB3P10600 412 aa9.97□□□□□ -0.81
NPC1-211ENST00000591075 CDK7P50613 346 aa9.97□□□□□ -0.81
NPC1-211ENST00000591075 FAM160A1Q05DH4 1040 aa9.97□□□□□ -0.81
NPC1-211ENST00000591075 AXDND1Q5T1B0 1012 aaPredicted RBP9.97□□□□□ -0.81
NPC1-211ENST00000591075 TMEM63BQ5T3F8 832 aa9.97□□□□□ -0.81
NPC1-211ENST00000591075 ERMNQ8TAM6 284 aa9.97□□□□□ -0.81
NPC1-211ENST00000591075 GPRASP2Q96D09 838 aa9.97□□□□□ -0.81
NPC1-211ENST00000591075 RNPC3Q96LT9 517 aaKnown RBP9.97□□□□□ -0.81
NPC1-211ENST00000591075 SPATA33Q96N06 139 aa9.97□□□□□ -0.81
NPC1-211ENST00000591075 MTMR9Q96QG7 549 aa9.97□□□□□ -0.81
NPC1-211ENST00000591075 RIT2Q99578 217 aa9.97□□□□□ -0.81
NPC1-211ENST00000591075 MXRA8Q9BRK3 442 aa9.97□□□□□ -0.81
NPC1-211ENST00000591075 KATNAL1Q9BW62 490 aa9.97□□□□□ -0.81
NPC1-211ENST00000591075 CCSER1Q9C0I3 900 aa9.97□□□□□ -0.81
NPC1-211ENST00000591075 LRRC27Q9C0I9 530 aa9.97□□□□□ -0.81
NPC1-211ENST00000591075 MTIF3Q9H2K0 278 aaKnown RBP9.97□□□□□ -0.81
NPC1-211ENST00000591075 HIPK3Q9H422 1215 aa9.97□□□□□ -0.81
NPC1-211ENST00000591075 CUEDC2Q9H467 287 aa9.97□□□□□ -0.81
NPC1-211ENST00000591075 TBC1D22BQ9NU19 505 aa9.97□□□□□ -0.81
NPC1-211ENST00000591075 TMEM260Q9NX78 707 aa9.97□□□□□ -0.81
NPC1-211ENST00000591075 TCEAL9Q9UHQ7 104 aa9.97□□□□□ -0.81
NPC1-211ENST00000591075 DDX41Q9UJV9 622 aaKnown RBP9.97□□□□□ -0.81
NPC1-211ENST00000591075 FBXO2Q9UK22 296 aaPredicted RBP9.97□□□□□ -0.81
NPC1-211ENST00000591075 PCDHA12Q9UN75 941 aa9.97□□□□□ -0.81
NPC1-211ENST00000591075 A6NJR5 290 aa9.96□□□□□ -0.82
NPC1-211ENST00000591075 SORBS3O60504 671 aa9.96□□□□□ -0.82
NPC1-211ENST00000591075 GGPS1O95749 300 aa9.96□□□□□ -0.82
NPC1-211ENST00000591075 MYL1P05976 194 aa9.96□□□□□ -0.82
NPC1-211ENST00000591075 MMP3P08254 477 aa9.96□□□□□ -0.82
NPC1-211ENST00000591075 UBA7P41226 1012 aa9.96□□□□□ -0.82
NPC1-211ENST00000591075 PURAQ00577 322 aaKnown RBP9.96□□□□□ -0.82
NPC1-211ENST00000591075 NEDD9Q14511 834 aa9.96□□□□□ -0.82
NPC1-211ENST00000591075 NBPF20Q3BBV1 942 aa9.96□□□□□ -0.82
NPC1-211ENST00000591075 LRIT3Q3SXY7 679 aa9.96□□□□□ -0.82
NPC1-211ENST00000591075 RESP18Q5W5W9 173 aa9.96□□□□□ -0.82
NPC1-211ENST00000591075 HAUS3Q68CZ6 603 aa9.96□□□□□ -0.82
NPC1-211ENST00000591075 MFSD5Q6N075 450 aa9.96□□□□□ -0.82
NPC1-211ENST00000591075 NFRKBQ6P4R8 1299 aa9.96□□□□□ -0.82
NPC1-211ENST00000591075 CCDC62Q6P9F0 684 aa9.96□□□□□ -0.82
NPC1-211ENST00000591075 FAM126BQ8IXS8 530 aa9.96□□□□□ -0.82
NPC1-211ENST00000591075 CCDC155Q8N6L0 562 aa9.96□□□□□ -0.82
NPC1-211ENST00000591075 C7orf31Q8N865 590 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms