RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 WASF1Q92558 559 aa11.92□□□□□ -0.5
TPM4-209ENST00000588483 AZI2Q9H6S1 392 aa11.92□□□□□ -0.5
TPM4-209ENST00000588483 SETD4Q9NVD3 440 aa11.92□□□□□ -0.5
TPM4-209ENST00000588483 PKD2L1Q9P0L9 805 aa11.92□□□□□ -0.5
TPM4-209ENST00000588483 TRANK1O15050 2925 aa11.92□□□□□ -0.5
TPM4-209ENST00000588483 MYH9P35579 1960 aaKnown RBP11.91□□□□□ -0.5
TPM4-209ENST00000588483 RRN3P2A6NIE6 340 aa11.91□□□□□ -0.5
TPM4-209ENST00000588483 KRT76Q01546 638 aa11.91□□□□□ -0.5
TPM4-209ENST00000588483 ST3GAL1Q11201 340 aa11.91□□□□□ -0.5
TPM4-209ENST00000588483 PPFIA1Q13136 1202 aa11.91□□□□□ -0.5
TPM4-209ENST00000588483 MKRN4PQ13434 485 aaPredicted RBP11.91□□□□□ -0.5
TPM4-209ENST00000588483 PRR16Q569H4 304 aa11.91□□□□□ -0.5
TPM4-209ENST00000588483 FAM26DQ5JW98 314 aa11.91□□□□□ -0.5
TPM4-209ENST00000588483 MARCH8Q5T0T0 291 aa11.91□□□□□ -0.5
TPM4-209ENST00000588483 CNKSR3Q6P9H4 555 aa11.91□□□□□ -0.5
TPM4-209ENST00000588483 KRT25Q7Z3Z0 450 aa11.91□□□□□ -0.5
TPM4-209ENST00000588483 DEFB128Q7Z7B8 93 aa11.91□□□□□ -0.5
TPM4-209ENST00000588483 PHOSPHO2Q8TCD6 241 aa11.91□□□□□ -0.5
TPM4-209ENST00000588483 GLG1Q92896 1179 aa11.91□□□□□ -0.5
TPM4-209ENST00000588483 TNPO1Q92973 898 aaKnown RBP11.91□□□□□ -0.5
TPM4-209ENST00000588483 GUCD1Q96NT3 240 aa11.91□□□□□ -0.5
TPM4-209ENST00000588483 SLC9A7Q96T83 725 aa11.91□□□□□ -0.5
TPM4-209ENST00000588483 RIT2Q99578 217 aa11.91□□□□□ -0.5
TPM4-209ENST00000588483 ZNF577Q9BSK1 485 aa11.91□□□□□ -0.5
TPM4-209ENST00000588483 PBX4Q9BYU1 374 aa11.91□□□□□ -0.5
TPM4-209ENST00000588483 TTYH1Q9H313 450 aaPredicted RBP11.91□□□□□ -0.5
TPM4-209ENST00000588483 SEMA6BQ9H3T3 888 aa11.91□□□□□ -0.5
TPM4-209ENST00000588483 ORC3Q9UBD5 711 aaPredicted RBP11.91□□□□□ -0.5
TPM4-209ENST00000588483 SLC4A7Q9Y6M7 1214 aa11.91□□□□□ -0.5
TPM4-209ENST00000588483 PTPRSQ13332 1948 aa11.91□□□□□ -0.5
TPM4-209ENST00000588483 SIP14410 1827 aa11.9□□□□□ -0.5
TPM4-209ENST00000588483 RSPH10B2B2RC85 870 aa11.9□□□□□ -0.5
TPM4-209ENST00000588483 MSH4O15457 936 aa11.9□□□□□ -0.5
TPM4-209ENST00000588483 EFCAB14O75071 495 aa11.9□□□□□ -0.5
TPM4-209ENST00000588483 RSPH10BP0C881 870 aa11.9□□□□□ -0.5
TPM4-209ENST00000588483 THPOP40225 353 aa11.9□□□□□ -0.5
TPM4-209ENST00000588483 STAT5BP51692 787 aa11.9□□□□□ -0.5
TPM4-209ENST00000588483 PLCB4Q15147 1175 aa11.9□□□□□ -0.5
TPM4-209ENST00000588483 NONOQ15233 471 aaKnown RBP eCLIP11.9□□□□□ -0.5
TPM4-209ENST00000588483 RAB30Q15771 203 aa11.9□□□□□ -0.5
TPM4-209ENST00000588483 GRIK4Q16099 956 aa11.9□□□□□ -0.5
TPM4-209ENST00000588483 B3GNT9Q6UX72 402 aa11.9□□□□□ -0.5
TPM4-209ENST00000588483 MICAL3Q7RTP6 2002 aa11.9□□□□□ -0.5
TPM4-209ENST00000588483 CCDC60Q8IWA6 550 aaPredicted RBP11.9□□□□□ -0.5
TPM4-209ENST00000588483 NECAB1Q8N987 351 aa11.9□□□□□ -0.5
TPM4-209ENST00000588483 SLC5A5Q92911 643 aa11.9□□□□□ -0.5
TPM4-209ENST00000588483 TIFAQ96CG3 184 aa11.9□□□□□ -0.5
TPM4-209ENST00000588483 SPTBN5Q9NRC6 3674 aaKnown RBP11.9□□□□□ -0.5
TPM4-209ENST00000588483 TUBE1Q9UJT0 475 aa11.9□□□□□ -0.5
TPM4-209ENST00000588483 LIMCH1Q9UPQ0 1083 aa11.9□□□□□ -0.5
TPM4-209ENST00000588483 STXBP5LQ9Y2K9 1186 aa11.9□□□□□ -0.5
TPM4-209ENST00000588483 MAFBQ9Y5Q3 323 aaPredicted RBP11.9□□□□□ -0.5
TPM4-209ENST00000588483 PRUNE2Q8WUY3 3088 aa11.9□□□□□ -0.51
TPM4-209ENST00000588483 IGSF9BQ9UPX0 1349 aa11.89□□□□□ -0.51
TPM4-209ENST00000588483 ABHD14A-ACY1A0A1B0GW23 586 aa11.89□□□□□ -0.51
TPM4-209ENST00000588483 PSMD10O75832 226 aa11.89□□□□□ -0.51
TPM4-209ENST00000588483 INSRRP14616 1297 aa11.89□□□□□ -0.51
TPM4-209ENST00000588483 ATP2A2P16615 1042 aaKnown RBP11.89□□□□□ -0.51
TPM4-209ENST00000588483 MARK3P27448 753 aa11.89□□□□□ -0.51
TPM4-209ENST00000588483 FAM160B1Q5W0V3 765 aa11.89□□□□□ -0.51
TPM4-209ENST00000588483 PPP4R3AQ6IN85 833 aa11.89□□□□□ -0.51
TPM4-209ENST00000588483 MIS18BP1Q6P0N0 1132 aa11.89□□□□□ -0.51
TPM4-209ENST00000588483 ETNPPLQ8TBG4 499 aa11.89□□□□□ -0.51
TPM4-209ENST00000588483 ATP8B4Q8TF62 1192 aa11.89□□□□□ -0.51
TPM4-209ENST00000588483 TNFRSF25Q93038 417 aa11.89□□□□□ -0.51
TPM4-209ENST00000588483 LLPHQ9BRT6 129 aaKnown RBP11.89□□□□□ -0.51
TPM4-209ENST00000588483 KCNJ14Q9UNX9 436 aa11.89□□□□□ -0.51
TPM4-209ENST00000588483 PCDHA11Q9Y5I1 949 aa11.89□□□□□ -0.51
TPM4-209ENST00000588483 PCDHA10Q9Y5I2 948 aa11.89□□□□□ -0.51
TPM4-209ENST00000588483 COL1A2P08123 1366 aa11.89□□□□□ -0.51
TPM4-209ENST00000588483 UNC80Q8N2C7 3258 aa11.88□□□□□ -0.51
TPM4-209ENST00000588483 POTEB3A0JP26 581 aa11.88□□□□□ -0.51
TPM4-209ENST00000588483 ZBBXA8MT70 800 aa11.88□□□□□ -0.51
TPM4-209ENST00000588483 GRXCR1A8MXD5 290 aa11.88□□□□□ -0.51
TPM4-209ENST00000588483 WDR64B1ANS9 1081 aa11.88□□□□□ -0.51
TPM4-209ENST00000588483 HBP1O60381 514 aa11.88□□□□□ -0.51
TPM4-209ENST00000588483 GCFC2P16383 781 aaKnown RBP11.88□□□□□ -0.51
TPM4-209ENST00000588483 ATP4AP20648 1035 aa11.88□□□□□ -0.51
TPM4-209ENST00000588483 WDR5P61964 334 aaKnown RBP11.88□□□□□ -0.51
TPM4-209ENST00000588483 MGAT3Q09327 533 aa11.88□□□□□ -0.51
TPM4-209ENST00000588483 TCTN1Q2MV58 587 aa11.88□□□□□ -0.51
TPM4-209ENST00000588483 PLEKHG4Q58EX7 1191 aa11.88□□□□□ -0.51
TPM4-209ENST00000588483 POTEBQ6S5H4 581 aa11.88□□□□□ -0.51
TPM4-209ENST00000588483 RUFY4Q6ZNE9 571 aa11.88□□□□□ -0.51
TPM4-209ENST00000588483 RDM1Q8NG50 284 aa11.88□□□□□ -0.51
TPM4-209ENST00000588483 ZSCAN31Q96LW9 406 aaPredicted RBP11.88□□□□□ -0.51
TPM4-209ENST00000588483 NAP1L4Q99733 375 aaKnown RBP11.88□□□□□ -0.51
TPM4-209ENST00000588483 FTOQ9C0B1 505 aaKnown RBP eCLIP11.88□□□□□ -0.51
TPM4-209ENST00000588483 ZNF576Q9H609 170 aa11.88□□□□□ -0.51
TPM4-209ENST00000588483 ZNF302Q9NR11 478 aa11.88□□□□□ -0.51
TPM4-209ENST00000588483 SH2B1Q9NRF2 756 aaPredicted RBP11.88□□□□□ -0.51
TPM4-209ENST00000588483 MSRAQ9UJ68 235 aa11.88□□□□□ -0.51
TPM4-209ENST00000588483 PCDHA2Q9Y5H9 948 aa11.88□□□□□ -0.51
TPM4-209ENST00000588483 MYO9BQ13459 2157 aa11.88□□□□□ -0.51
TPM4-209ENST00000588483 A0A0C4DFX4 3053 aa11.88□□□□□ -0.51
TPM4-209ENST00000588483 CCDC194A0A1B0GVG4 234 aa11.87□□□□□ -0.51
TPM4-209ENST00000588483 ZBTB42B2RXF5 422 aa11.87□□□□□ -0.51
TPM4-209ENST00000588483 DDX39AO00148 427 aaKnown RBP11.87□□□□□ -0.51
TPM4-209ENST00000588483 BACH1O14867 736 aa11.87□□□□□ -0.51
TPM4-209ENST00000588483 TBX3O15119 743 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms