RNA–Protein interactions for RNA: ENST00000588269.1

PRKCSH-207, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-207ENST00000588269 HERVK_113Q902F9 699 aa13.3□□□□□ -0.28
PRKCSH-207ENST00000588269 ZSCAN31Q96LW9 406 aaPredicted RBP13.3□□□□□ -0.28
PRKCSH-207ENST00000588269 NECAB3Q96P71 396 aaPredicted RBP13.3□□□□□ -0.28
PRKCSH-207ENST00000588269 FTOQ9C0B1 505 aaKnown RBP eCLIP13.3□□□□□ -0.28
PRKCSH-207ENST00000588269 SH2B1Q9NRF2 756 aaPredicted RBP13.3□□□□□ -0.28
PRKCSH-207ENST00000588269 LIMCH1Q9UPQ0 1083 aa13.3□□□□□ -0.28
PRKCSH-207ENST00000588269 TRPC6Q9Y210 931 aa13.3□□□□□ -0.28
PRKCSH-207ENST00000588269 SPTBN5Q9NRC6 3674 aaKnown RBP13.3□□□□□ -0.28
PRKCSH-207ENST00000588269 RRN3P2A6NIE6 340 aa13.29□□□□□ -0.28
PRKCSH-207ENST00000588269 FAM86B1E9PN63 330 aa13.29□□□□□ -0.28
PRKCSH-207ENST00000588269 FAM86B2P0C5J1 330 aa13.29□□□□□ -0.28
PRKCSH-207ENST00000588269 GCFC2P16383 781 aaKnown RBP13.29□□□□□ -0.28
PRKCSH-207ENST00000588269 HOXC8P31273 242 aa13.29□□□□□ -0.28
PRKCSH-207ENST00000588269 KCNJ6P48051 423 aa13.29□□□□□ -0.28
PRKCSH-207ENST00000588269 RABEP1Q15276 862 aa13.29□□□□□ -0.28
PRKCSH-207ENST00000588269 ZNF746Q6NUN9 644 aaPredicted RBP13.29□□□□□ -0.28
PRKCSH-207ENST00000588269 MOXD1Q6UVY6 613 aa13.29□□□□□ -0.28
PRKCSH-207ENST00000588269 PLPPR4Q7Z2D5 763 aa13.29□□□□□ -0.28
PRKCSH-207ENST00000588269 DEFB128Q7Z7B8 93 aa13.29□□□□□ -0.28
PRKCSH-207ENST00000588269 RASGRP4Q8TDF6 673 aa13.29□□□□□ -0.28
PRKCSH-207ENST00000588269 TBCKQ8TEA7 893 aa13.29□□□□□ -0.28
PRKCSH-207ENST00000588269 CRYGNQ8WXF5 182 aa13.29□□□□□ -0.28
PRKCSH-207ENST00000588269 CERS4Q9HA82 394 aa13.29□□□□□ -0.28
PRKCSH-207ENST00000588269 KIF3AQ9Y496 699 aa13.29□□□□□ -0.28
PRKCSH-207ENST00000588269 SLC4A7Q9Y6M7 1214 aa13.29□□□□□ -0.28
PRKCSH-207ENST00000588269 IGLV3-22A0A075B6J6 115 aa13.28□□□□□ -0.28
PRKCSH-207ENST00000588269 WDR64B1ANS9 1081 aa13.28□□□□□ -0.28
PRKCSH-207ENST00000588269 DDX39AO00148 427 aaKnown RBP13.28□□□□□ -0.28
PRKCSH-207ENST00000588269 TNFRSF10AO00220 468 aa13.28□□□□□ -0.28
PRKCSH-207ENST00000588269 GAS7O60861 476 aa13.28□□□□□ -0.28
PRKCSH-207ENST00000588269 LGR5O75473 907 aa13.28□□□□□ -0.28
PRKCSH-207ENST00000588269 ARP10275 920 aa13.28□□□□□ -0.28
PRKCSH-207ENST00000588269 CKBP12277 381 aa13.28□□□□□ -0.28
PRKCSH-207ENST00000588269 MARK3P27448 753 aa13.28□□□□□ -0.28
PRKCSH-207ENST00000588269 KRT2P35908 639 aa13.28□□□□□ -0.28
PRKCSH-207ENST00000588269 THPOP40225 353 aa13.28□□□□□ -0.28
PRKCSH-207ENST00000588269 RBM25P49756 843 aaKnown RBP13.28□□□□□ -0.28
PRKCSH-207ENST00000588269 STAT5BP51692 787 aa13.28□□□□□ -0.28
PRKCSH-207ENST00000588269 JAK3P52333 1124 aa13.28□□□□□ -0.28
PRKCSH-207ENST00000588269 HMGN5P82970 282 aaKnown RBP13.28□□□□□ -0.28
PRKCSH-207ENST00000588269 ITGB3BPQ13352 177 aaPredicted RBP13.28□□□□□ -0.28
PRKCSH-207ENST00000588269 SAFBQ15424 915 aaKnown RBP eCLIP13.28□□□□□ -0.28
PRKCSH-207ENST00000588269 ME3Q16798 604 aa13.28□□□□□ -0.28
PRKCSH-207ENST00000588269 KRT40Q6A162 431 aa13.28□□□□□ -0.28
PRKCSH-207ENST00000588269 CYP2W1Q8TAV3 490 aa13.28□□□□□ -0.28
PRKCSH-207ENST00000588269 LMBR1Q8WVP7 490 aa13.28□□□□□ -0.28
PRKCSH-207ENST00000588269 SYMPKQ92797 1274 aaKnown RBP13.28□□□□□ -0.28
PRKCSH-207ENST00000588269 FAM167AQ96KS9 214 aa13.28□□□□□ -0.28
PRKCSH-207ENST00000588269 SLC9A7Q96T83 725 aa13.28□□□□□ -0.28
PRKCSH-207ENST00000588269 RIT2Q99578 217 aa13.28□□□□□ -0.28
PRKCSH-207ENST00000588269 LLPHQ9BRT6 129 aaKnown RBP13.28□□□□□ -0.28
PRKCSH-207ENST00000588269 PHF20Q9BVI0 1012 aa13.28□□□□□ -0.28
PRKCSH-207ENST00000588269 MSRAQ9UJ68 235 aa13.28□□□□□ -0.28
PRKCSH-207ENST00000588269 TUBE1Q9UJT0 475 aa13.28□□□□□ -0.28
PRKCSH-207ENST00000588269 SAMM50Q9Y512 469 aa13.28□□□□□ -0.28
PRKCSH-207ENST00000588269 GSTTP1A0A1W2PQM5 241 aa13.27□□□□□ -0.29
PRKCSH-207ENST00000588269 M0QZ92 97 aa13.27□□□□□ -0.29
PRKCSH-207ENST00000588269 ARHGEF15O94989 841 aa13.27□□□□□ -0.29
PRKCSH-207ENST00000588269 SEC24BO95487 1268 aa13.27□□□□□ -0.29
PRKCSH-207ENST00000588269 PSAPP07602 524 aa13.27□□□□□ -0.29
PRKCSH-207ENST00000588269 COL9A1P20849 921 aa13.27□□□□□ -0.29
PRKCSH-207ENST00000588269 SFNP31947 248 aa13.27□□□□□ -0.29
PRKCSH-207ENST00000588269 TFF2Q03403 129 aa13.27□□□□□ -0.29
PRKCSH-207ENST00000588269 GRIK4Q16099 956 aa13.27□□□□□ -0.29
PRKCSH-207ENST00000588269 CNKSR3Q6P9H4 555 aa13.27□□□□□ -0.29
PRKCSH-207ENST00000588269 SPRED2Q7Z698 418 aa13.27□□□□□ -0.29
PRKCSH-207ENST00000588269 NEK8Q86SG6 692 aa13.27□□□□□ -0.29
PRKCSH-207ENST00000588269 ADAMTS19Q8TE59 1207 aa13.27□□□□□ -0.29
PRKCSH-207ENST00000588269 TEKT3Q9BXF9 490 aa13.27□□□□□ -0.29
PRKCSH-207ENST00000588269 RNPEPQ9H4A4 650 aa13.27□□□□□ -0.29
PRKCSH-207ENST00000588269 ZNF302Q9NR11 478 aa13.27□□□□□ -0.29
PRKCSH-207ENST00000588269 SETD4Q9NVD3 440 aa13.27□□□□□ -0.29
PRKCSH-207ENST00000588269 THEGQ9P2T0 379 aa13.27□□□□□ -0.29
PRKCSH-207ENST00000588269 CEP131Q9UPN4 1083 aa13.27□□□□□ -0.29
PRKCSH-207ENST00000588269 EPOPA6NHQ4 379 aa13.26□□□□□ -0.29
PRKCSH-207ENST00000588269 RSPH10B2B2RC85 870 aa13.26□□□□□ -0.29
PRKCSH-207ENST00000588269 COL1A2P08123 1366 aa13.26□□□□□ -0.29
PRKCSH-207ENST00000588269 RSPH10BP0C881 870 aa13.26□□□□□ -0.29
PRKCSH-207ENST00000588269 ATP2A2P16615 1042 aaKnown RBP13.26□□□□□ -0.29
PRKCSH-207ENST00000588269 Q4G0T1 1027 aa13.26□□□□□ -0.29
PRKCSH-207ENST00000588269 LRCH2Q5VUJ6 765 aa13.26□□□□□ -0.29
PRKCSH-207ENST00000588269 PPP2R2DQ66LE6 453 aa13.26□□□□□ -0.29
PRKCSH-207ENST00000588269 PDXDC2PQ6P474 469 aa13.26□□□□□ -0.29
PRKCSH-207ENST00000588269 CKAP2LQ8IYA6 745 aa13.26□□□□□ -0.29
PRKCSH-207ENST00000588269 NECAB1Q8N987 351 aa13.26□□□□□ -0.29
PRKCSH-207ENST00000588269 FAM184AQ8NB25 1140 aa13.26□□□□□ -0.29
PRKCSH-207ENST00000588269 NSUN7Q8NE18 718 aaKnown RBP13.26□□□□□ -0.29
PRKCSH-207ENST00000588269 RDM1Q8NG50 284 aa13.26□□□□□ -0.29
PRKCSH-207ENST00000588269 DHX38Q92620 1227 aaKnown RBP13.26□□□□□ -0.29
PRKCSH-207ENST00000588269 AIFM3Q96NN9 605 aa13.26□□□□□ -0.29
PRKCSH-207ENST00000588269 ASB2Q96Q27 587 aa13.26□□□□□ -0.29
PRKCSH-207ENST00000588269 BCAS3Q9H6U6 928 aa13.26□□□□□ -0.29
PRKCSH-207ENST00000588269 DOCK5Q9H7D0 1870 aa13.26□□□□□ -0.29
PRKCSH-207ENST00000588269 SLC28A3Q9HAS3 691 aa13.26□□□□□ -0.29
PRKCSH-207ENST00000588269 DDX25Q9UHL0 483 aaKnown RBP13.26□□□□□ -0.29
PRKCSH-207ENST00000588269 PCDHA10Q9Y5I2 948 aa13.26□□□□□ -0.29
PRKCSH-207ENST00000588269 POTEB3A0JP26 581 aa13.25□□□□□ -0.29
PRKCSH-207ENST00000588269 KIF28PB7ZC32 967 aa13.25□□□□□ -0.29
PRKCSH-207ENST00000588269 TREHO43280 583 aa13.25□□□□□ -0.29
PRKCSH-207ENST00000588269 MARCH6O60337 910 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms