RNA–Protein interactions for RNA: ENST00000588055.1

SDHDP1-201, Transcript of succinate dehydrogenase complex subunit D pseudogene 1, humanhuman

BASIC

Gene SDHDP1, Length 474 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDP1-201ENST00000588055 ABHD15Q6UXT9 468 aa13.37□□□□□ -0.27
SDHDP1-201ENST00000588055 FERMT3Q86UX7 667 aa13.37□□□□□ -0.27
SDHDP1-201ENST00000588055 AFAP1L1Q8TED9 768 aa13.37□□□□□ -0.27
SDHDP1-201ENST00000588055 GJA10Q969M2 543 aa13.37□□□□□ -0.27
SDHDP1-201ENST00000588055 LBHD1Q9BQE6 289 aaPredicted RBP13.37□□□□□ -0.27
SDHDP1-201ENST00000588055 RAB34Q9BZG1 259 aa13.37□□□□□ -0.27
SDHDP1-201ENST00000588055 ZSCAN16Q9H4T2 348 aaPredicted RBP13.37□□□□□ -0.27
SDHDP1-201ENST00000588055 PDLIM7Q9NR12 457 aa13.37□□□□□ -0.27
SDHDP1-201ENST00000588055 ZMYND8Q9ULU4 1186 aaPredicted RBP13.37□□□□□ -0.27
SDHDP1-201ENST00000588055 PCDHA12Q9UN75 941 aa13.37□□□□□ -0.27
SDHDP1-201ENST00000588055 GRIN2DO15399 1336 aa13.37□□□□□ -0.27
SDHDP1-201ENST00000588055 NRCAMQ92823 1304 aa13.37□□□□□ -0.27
SDHDP1-201ENST00000588055 IGSF9BQ9UPX0 1349 aa13.37□□□□□ -0.27
SDHDP1-201ENST00000588055 POTEB3A0JP26 581 aa13.36□□□□□ -0.27
SDHDP1-201ENST00000588055 ATG7O95352 703 aa13.36□□□□□ -0.27
SDHDP1-201ENST00000588055 RAG1P15918 1043 aa13.36□□□□□ -0.27
SDHDP1-201ENST00000588055 TXKP42681 527 aa13.36□□□□□ -0.27
SDHDP1-201ENST00000588055 BFSP2Q13515 415 aa13.36□□□□□ -0.27
SDHDP1-201ENST00000588055 SWSAP1Q6NVH7 229 aa13.36□□□□□ -0.27
SDHDP1-201ENST00000588055 POTEBQ6S5H4 581 aa13.36□□□□□ -0.27
SDHDP1-201ENST00000588055 CCDC60Q8IWA6 550 aaPredicted RBP13.36□□□□□ -0.27
SDHDP1-201ENST00000588055 ERMNQ8TAM6 284 aa13.36□□□□□ -0.27
SDHDP1-201ENST00000588055 HAS1Q92839 578 aa13.36□□□□□ -0.27
SDHDP1-201ENST00000588055 TTC12Q9H892 705 aaPredicted RBP13.36□□□□□ -0.27
SDHDP1-201ENST00000588055 TRMT13Q9NUP7 481 aaKnown RBP13.36□□□□□ -0.27
SDHDP1-201ENST00000588055 HDAC6Q9UBN7 1215 aa13.36□□□□□ -0.27
SDHDP1-201ENST00000588055 GABBR1Q9UBS5 961 aa13.36□□□□□ -0.27
SDHDP1-201ENST00000588055 VAV3Q9UKW4 847 aa13.36□□□□□ -0.27
SDHDP1-201ENST00000588055 TELO2Q9Y4R8 837 aa13.36□□□□□ -0.27
SDHDP1-201ENST00000588055 MYH9P35579 1960 aaKnown RBP13.36□□□□□ -0.27
SDHDP1-201ENST00000588055 IGKV6D-21A0A0A0MT36 114 aa13.35□□□□□ -0.27
SDHDP1-201ENST00000588055 SYN1P17600 705 aa13.35□□□□□ -0.27
SDHDP1-201ENST00000588055 PRKCEQ02156 737 aa13.35□□□□□ -0.27
SDHDP1-201ENST00000588055 FAAP100Q0VG06 881 aa13.35□□□□□ -0.27
SDHDP1-201ENST00000588055 NBR1Q14596 966 aa13.35□□□□□ -0.27
SDHDP1-201ENST00000588055 GRIK4Q16099 956 aa13.35□□□□□ -0.27
SDHDP1-201ENST00000588055 HAUS3Q68CZ6 603 aa13.35□□□□□ -0.27
SDHDP1-201ENST00000588055 GDF6Q6KF10 455 aaPredicted RBP13.35□□□□□ -0.27
SDHDP1-201ENST00000588055 NEK9Q8TD19 979 aa13.35□□□□□ -0.27
SDHDP1-201ENST00000588055 ATP8B4Q8TF62 1192 aa13.35□□□□□ -0.27
SDHDP1-201ENST00000588055 CCDC43Q96MW1 224 aaKnown RBP13.35□□□□□ -0.27
SDHDP1-201ENST00000588055 TRPV6Q9H1D0 765 aa13.35□□□□□ -0.27
SDHDP1-201ENST00000588055 HIPK3Q9H422 1215 aa13.35□□□□□ -0.27
SDHDP1-201ENST00000588055 TUBE1Q9UJT0 475 aa13.35□□□□□ -0.27
SDHDP1-201ENST00000588055 PCDHB6Q9Y5E3 794 aa13.35□□□□□ -0.27
SDHDP1-201ENST00000588055 PDE4DIPQ5VU43 2346 aa13.35□□□□□ -0.27
SDHDP1-201ENST00000588055 COL1A2P08123 1366 aa13.34□□□□□ -0.27
SDHDP1-201ENST00000588055 KAT6AQ92794 2004 aa13.34□□□□□ -0.27
SDHDP1-201ENST00000588055 RRN3P2A6NIE6 340 aa13.34□□□□□ -0.27
SDHDP1-201ENST00000588055 H0YGN5 161 aa13.34□□□□□ -0.27
SDHDP1-201ENST00000588055 WNT7AO00755 349 aa13.34□□□□□ -0.27
SDHDP1-201ENST00000588055 KIAA0355O15063 1070 aa13.34□□□□□ -0.27
SDHDP1-201ENST00000588055 HBP1O60381 514 aa13.34□□□□□ -0.27
SDHDP1-201ENST00000588055 CD4P01730 458 aa13.34□□□□□ -0.27
SDHDP1-201ENST00000588055 OATP04181 439 aa13.34□□□□□ -0.27
SDHDP1-201ENST00000588055 RPLP2P05387 115 aaKnown RBP13.34□□□□□ -0.27
SDHDP1-201ENST00000588055 PSMC5P62195 406 aa13.34□□□□□ -0.27
SDHDP1-201ENST00000588055 IGBP1P78318 339 aa13.34□□□□□ -0.27
SDHDP1-201ENST00000588055 PTGDRQ13258 359 aa13.34□□□□□ -0.27
SDHDP1-201ENST00000588055 PTK7Q13308 1070 aa13.34□□□□□ -0.27
SDHDP1-201ENST00000588055 PLCB4Q15147 1175 aa13.34□□□□□ -0.27
SDHDP1-201ENST00000588055 PRPF38BQ5VTL8 546 aaKnown RBP13.34□□□□□ -0.27
SDHDP1-201ENST00000588055 CAGE1Q8TC20 777 aa13.34□□□□□ -0.27
SDHDP1-201ENST00000588055 PPP1R13LQ8WUF5 828 aa13.34□□□□□ -0.27
SDHDP1-201ENST00000588055 LMBR1Q8WVP7 490 aa13.34□□□□□ -0.27
SDHDP1-201ENST00000588055 BBXQ8WY36 941 aaPredicted RBP13.34□□□□□ -0.27
SDHDP1-201ENST00000588055 MTMR9Q96QG7 549 aa13.34□□□□□ -0.27
SDHDP1-201ENST00000588055 PCYT2Q99447 389 aa13.34□□□□□ -0.27
SDHDP1-201ENST00000588055 PPP1R12CQ9BZL4 782 aa13.34□□□□□ -0.27
SDHDP1-201ENST00000588055 RNPEPQ9H4A4 650 aa13.34□□□□□ -0.27
SDHDP1-201ENST00000588055 SEPT9Q9UHD8 586 aaPredicted RBP13.34□□□□□ -0.27
SDHDP1-201ENST00000588055 TBX21Q9UL17 535 aa13.34□□□□□ -0.27
SDHDP1-201ENST00000588055 MTMR6Q9Y217 621 aa13.34□□□□□ -0.27
SDHDP1-201ENST00000588055 MAFBQ9Y5Q3 323 aaPredicted RBP13.34□□□□□ -0.27
SDHDP1-201ENST00000588055 STK24Q9Y6E0 443 aa13.34□□□□□ -0.27
SDHDP1-201ENST00000588055 LTBP2Q14767 1821 aa13.34□□□□□ -0.27
SDHDP1-201ENST00000588055 TANC1Q9C0D5 1861 aa13.33□□□□□ -0.27
SDHDP1-201ENST00000588055 P4HBP07237 508 aaKnown RBP13.33□□□□□ -0.28
SDHDP1-201ENST00000588055 PRPHP41219 470 aa13.33□□□□□ -0.28
SDHDP1-201ENST00000588055 QARSP47897 775 aaKnown RBP13.33□□□□□ -0.28
SDHDP1-201ENST00000588055 TOB1P50616 345 aaPredicted RBP13.33□□□□□ -0.28
SDHDP1-201ENST00000588055 RESTQ13127 1097 aa13.33□□□□□ -0.28
SDHDP1-201ENST00000588055 EPHA7Q15375 998 aa13.33□□□□□ -0.28
SDHDP1-201ENST00000588055 TAF2Q6P1X5 1199 aa13.33□□□□□ -0.28
SDHDP1-201ENST00000588055 B3GNT9Q6UX72 402 aa13.33□□□□□ -0.28
SDHDP1-201ENST00000588055 DTHD1Q6ZMT9 781 aa13.33□□□□□ -0.28
SDHDP1-201ENST00000588055 TRMT1LQ7Z2T5 733 aaKnown RBP13.33□□□□□ -0.28
SDHDP1-201ENST00000588055 RSPH3Q86UC2 560 aa13.33□□□□□ -0.28
SDHDP1-201ENST00000588055 TMEM199Q8N511 208 aa13.33□□□□□ -0.28
SDHDP1-201ENST00000588055 RETREG2Q8NC44 543 aa13.33□□□□□ -0.28
SDHDP1-201ENST00000588055 BANK1Q8NDB2 785 aa13.33□□□□□ -0.28
SDHDP1-201ENST00000588055 LXNQ9BS40 222 aa13.33□□□□□ -0.28
SDHDP1-201ENST00000588055 TMEM60Q9H2L4 133 aa13.33□□□□□ -0.28
SDHDP1-201ENST00000588055 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.33□□□□□ -0.28
SDHDP1-201ENST00000588055 NRBP2Q9NSY0 501 aa13.33□□□□□ -0.28
SDHDP1-201ENST00000588055 SETD4Q9NVD3 440 aa13.33□□□□□ -0.28
SDHDP1-201ENST00000588055 MYH15Q9Y2K3 1946 aa13.33□□□□□ -0.28
SDHDP1-201ENST00000588055 POTEMA6NI47 508 aa13.32□□□□□ -0.28
SDHDP1-201ENST00000588055 PITPNM1O00562 1244 aa13.32□□□□□ -0.28
SDHDP1-201ENST00000588055 TIMP1P01033 207 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms