RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 IPO5O00410 1097 aaKnown RBP11.36□□□□□ -0.59
APOC1-201ENST00000586638 SOX1O00570 391 aaPredicted RBP11.36□□□□□ -0.59
APOC1-201ENST00000586638 IKBKBO14920 756 aa11.36□□□□□ -0.59
APOC1-201ENST00000586638 COBLO75128 1261 aa11.36□□□□□ -0.59
APOC1-201ENST00000586638 MYL1P05976 194 aa11.36□□□□□ -0.59
APOC1-201ENST00000586638 SPATA31C1P0DKV0 1188 aa11.36□□□□□ -0.59
APOC1-201ENST00000586638 GCLCP48506 637 aaPredicted RBP11.36□□□□□ -0.59
APOC1-201ENST00000586638 ZNF75DP51815 510 aa11.36□□□□□ -0.59
APOC1-201ENST00000586638 STX17P56962 302 aa11.36□□□□□ -0.59
APOC1-201ENST00000586638 TPM4P67936 248 aa11.36□□□□□ -0.59
APOC1-201ENST00000586638 CNTN2Q02246 1040 aa11.36□□□□□ -0.59
APOC1-201ENST00000586638 ITGB3BPQ13352 177 aaPredicted RBP11.36□□□□□ -0.59
APOC1-201ENST00000586638 MTMR1Q13613 665 aa11.36□□□□□ -0.59
APOC1-201ENST00000586638 CTTNQ14247 550 aaKnown RBP11.36□□□□□ -0.59
APOC1-201ENST00000586638 KCNB1Q14721 858 aa11.36□□□□□ -0.59
APOC1-201ENST00000586638 FAM110CQ1W6H9 321 aa11.36□□□□□ -0.59
APOC1-201ENST00000586638 ZNF658Q5TYW1 1059 aaPredicted RBP11.36□□□□□ -0.59
APOC1-201ENST00000586638 DYMQ7RTS9 669 aa11.36□□□□□ -0.59
APOC1-201ENST00000586638 GPBP1Q86WP2 473 aa11.36□□□□□ -0.59
APOC1-201ENST00000586638 ANKRD35Q8N283 1001 aa11.36□□□□□ -0.59
APOC1-201ENST00000586638 ANKLE1Q8NAG6 615 aa11.36□□□□□ -0.59
APOC1-201ENST00000586638 LRCH3Q96II8 777 aa11.36□□□□□ -0.59
APOC1-201ENST00000586638 HMX1Q9NP08 348 aaPredicted RBP11.36□□□□□ -0.59
APOC1-201ENST00000586638 KCNH7Q9NS40 1196 aa11.36□□□□□ -0.59
APOC1-201ENST00000586638 FBXO40Q9UH90 709 aa11.36□□□□□ -0.59
APOC1-201ENST00000586638 GJD2Q9UKL4 321 aa11.36□□□□□ -0.59
APOC1-201ENST00000586638 MYH11P35749 1972 aa11.36□□□□□ -0.59
APOC1-201ENST00000586638 ASTN1O14525 1302 aa11.35□□□□□ -0.59
APOC1-201ENST00000586638 PPP1R3GB7ZBB8 358 aa11.35□□□□□ -0.59
APOC1-201ENST00000586638 RHOBTB3O94955 611 aa11.35□□□□□ -0.59
APOC1-201ENST00000586638 NR3C2P08235 984 aa11.35□□□□□ -0.59
APOC1-201ENST00000586638 PLA2G4BP0C869 781 aa11.35□□□□□ -0.59
APOC1-201ENST00000586638 ERCC3P19447 782 aa11.35□□□□□ -0.59
APOC1-201ENST00000586638 RPA1P27694 616 aa11.35□□□□□ -0.59
APOC1-201ENST00000586638 BMP8BP34820 402 aa11.35□□□□□ -0.59
APOC1-201ENST00000586638 ALDH5A1P51649 535 aaPredicted RBP11.35□□□□□ -0.59
APOC1-201ENST00000586638 PSMC6P62333 389 aa11.35□□□□□ -0.59
APOC1-201ENST00000586638 AMPD3Q01432 767 aa11.35□□□□□ -0.59
APOC1-201ENST00000586638 CACNB1Q02641 598 aaPredicted RBP11.35□□□□□ -0.59
APOC1-201ENST00000586638 PDE4DQ08499 809 aa11.35□□□□□ -0.59
APOC1-201ENST00000586638 SEMA3FQ13275 785 aa11.35□□□□□ -0.59
APOC1-201ENST00000586638 SARM1Q6SZW1 724 aa11.35□□□□□ -0.59
APOC1-201ENST00000586638 B3GNT9Q6UX72 402 aa11.35□□□□□ -0.59
APOC1-201ENST00000586638 MIER3Q7Z3K6 550 aa11.35□□□□□ -0.59
APOC1-201ENST00000586638 CATSPER3Q86XQ3 398 aa11.35□□□□□ -0.59
APOC1-201ENST00000586638 C7orf61Q8IZ16 206 aa11.35□□□□□ -0.59
APOC1-201ENST00000586638 NSUN6Q8TEA1 469 aaKnown RBP11.35□□□□□ -0.59
APOC1-201ENST00000586638 CCDC47Q96A33 483 aaKnown RBP11.35□□□□□ -0.59
APOC1-201ENST00000586638 MED15Q96RN5 788 aa11.35□□□□□ -0.59
APOC1-201ENST00000586638 RIT2Q99578 217 aa11.35□□□□□ -0.59
APOC1-201ENST00000586638 GDF15Q99988 308 aa11.35□□□□□ -0.59
APOC1-201ENST00000586638 POLR3CQ9BUI4 534 aaPredicted RBP11.35□□□□□ -0.59
APOC1-201ENST00000586638 TRIM5Q9C035 493 aa11.35□□□□□ -0.59
APOC1-201ENST00000586638 HSD3B7Q9H2F3 369 aa11.35□□□□□ -0.59
APOC1-201ENST00000586638 RGL1Q9NZL6 768 aa11.35□□□□□ -0.59
APOC1-201ENST00000586638 RBPJLQ9UBG7 517 aa11.35□□□□□ -0.59
APOC1-201ENST00000586638 STK24Q9Y6E0 443 aa11.35□□□□□ -0.59
APOC1-201ENST00000586638 NPHP3-ACAD11A0A0J9YXS1 232 aa11.34□□□□□ -0.59
APOC1-201ENST00000586638 DHX15O43143 795 aaKnown RBP11.34□□□□□ -0.59
APOC1-201ENST00000586638 HMGCRP04035 888 aa11.34□□□□□ -0.59
APOC1-201ENST00000586638 PTMAP06454 111 aaKnown RBP11.34□□□□□ -0.59
APOC1-201ENST00000586638 FCER1AP12319 257 aa11.34□□□□□ -0.59
APOC1-201ENST00000586638 ATP1A3P13637 1013 aa11.34□□□□□ -0.59
APOC1-201ENST00000586638 ERCC5P28715 1186 aaPredicted RBP11.34□□□□□ -0.59
APOC1-201ENST00000586638 PRCPP42785 496 aa11.34□□□□□ -0.59
APOC1-201ENST00000586638 SLC12A3P55017 1021 aa11.34□□□□□ -0.59
APOC1-201ENST00000586638 COASYQ13057 564 aa11.34□□□□□ -0.59
APOC1-201ENST00000586638 PAK1Q13153 545 aa11.34□□□□□ -0.59
APOC1-201ENST00000586638 Q3C1V9 767 aa11.34□□□□□ -0.59
APOC1-201ENST00000586638 HSP90AA4PQ58FG1 418 aa11.34□□□□□ -0.59
APOC1-201ENST00000586638 WDR78Q5VTH9 848 aa11.34□□□□□ -0.59
APOC1-201ENST00000586638 XRRA1Q6P2D8 792 aa11.34□□□□□ -0.59
APOC1-201ENST00000586638 UNC13DQ70J99 1090 aa11.34□□□□□ -0.59
APOC1-201ENST00000586638 SPC24Q8NBT2 197 aa11.34□□□□□ -0.59
APOC1-201ENST00000586638 BANK1Q8NDB2 785 aa11.34□□□□□ -0.59
APOC1-201ENST00000586638 DIS3LQ8TF46 1054 aaKnown RBP11.34□□□□□ -0.59
APOC1-201ENST00000586638 NELFBQ8WX92 580 aa11.34□□□□□ -0.59
APOC1-201ENST00000586638 DDX12PQ92771 950 aa11.34□□□□□ -0.59
APOC1-201ENST00000586638 HPS3Q969F9 1004 aa11.34□□□□□ -0.59
APOC1-201ENST00000586638 TUFT1Q9NNX1 390 aa11.34□□□□□ -0.59
APOC1-201ENST00000586638 ZMYND8Q9ULU4 1186 aaPredicted RBP11.34□□□□□ -0.59
APOC1-201ENST00000586638 NFE2L3Q9Y4A8 694 aa11.34□□□□□ -0.59
APOC1-201ENST00000586638 UNC80Q8N2C7 3258 aa11.34□□□□□ -0.59
APOC1-201ENST00000586638 SOWAHBA6NEL2 793 aa11.33□□□□□ -0.6
APOC1-201ENST00000586638 POTEB2H3BUK9 544 aa11.33□□□□□ -0.6
APOC1-201ENST00000586638 SORBS3O60504 671 aa11.33□□□□□ -0.6
APOC1-201ENST00000586638 ATP9AO75110 1047 aa11.33□□□□□ -0.6
APOC1-201ENST00000586638 SLC25A27O95847 323 aa11.33□□□□□ -0.6
APOC1-201ENST00000586638 IDEP14735 1019 aa11.33□□□□□ -0.6
APOC1-201ENST00000586638 CYP11B2P19099 503 aa11.33□□□□□ -0.6
APOC1-201ENST00000586638 COPB2P35606 906 aa11.33□□□□□ -0.6
APOC1-201ENST00000586638 ERVK-9P63128 1117 aa11.33□□□□□ -0.6
APOC1-201ENST00000586638 ERVK-24P63145 666 aa11.33□□□□□ -0.6
APOC1-201ENST00000586638 FANCCQ00597 558 aa11.33□□□□□ -0.6
APOC1-201ENST00000586638 RAD51AP2Q09MP3 1159 aa11.33□□□□□ -0.6
APOC1-201ENST00000586638 TRIM32Q13049 653 aa11.33□□□□□ -0.6
APOC1-201ENST00000586638 EPHA7Q15375 998 aa11.33□□□□□ -0.6
APOC1-201ENST00000586638 GPR153Q6NV75 609 aa11.33□□□□□ -0.6
APOC1-201ENST00000586638 NLRX1Q86UT6 975 aa11.33□□□□□ -0.6
APOC1-201ENST00000586638 VSIG10LQ86VR7 867 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms