RNA–Protein interactions for RNA: ENST00000584672.1

CSNK1D-224, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-224ENST00000584672 LAMA4Q16363 1823 aa16.39■□□□□ 0.21
CSNK1D-224ENST00000584672 ZMYM6O95789 1325 aa16.39■□□□□ 0.21
CSNK1D-224ENST00000584672 PROB1E7EW31 1015 aa16.38■□□□□ 0.21
CSNK1D-224ENST00000584672 ID4P47928 161 aa16.38■□□□□ 0.21
CSNK1D-224ENST00000584672 MRPS9P82933 396 aaKnown RBP16.38■□□□□ 0.21
CSNK1D-224ENST00000584672 GHRHRQ02643 423 aa16.38■□□□□ 0.21
CSNK1D-224ENST00000584672 LLGL2Q6P1M3 1020 aa16.38■□□□□ 0.21
CSNK1D-224ENST00000584672 TSHZ1Q6ZSZ6 1077 aa16.38■□□□□ 0.21
CSNK1D-224ENST00000584672 FRMD5Q7Z6J6 570 aa16.38■□□□□ 0.21
CSNK1D-224ENST00000584672 RTN4RL1Q86UN2 441 aaPredicted RBP16.38■□□□□ 0.21
CSNK1D-224ENST00000584672 ENAHQ8N8S7 591 aaPredicted RBP16.38■□□□□ 0.21
CSNK1D-224ENST00000584672 TMEM105Q8N8V8 129 aa16.38■□□□□ 0.21
CSNK1D-224ENST00000584672 SUSD6Q92537 303 aa16.38■□□□□ 0.21
CSNK1D-224ENST00000584672 ZSCAN10Q96SZ4 725 aaPredicted RBP16.38■□□□□ 0.21
CSNK1D-224ENST00000584672 FAM49AQ9H0Q0 323 aaPredicted RBP16.38■□□□□ 0.21
CSNK1D-224ENST00000584672 SMOC2Q9H3U7 446 aa16.38■□□□□ 0.21
CSNK1D-224ENST00000584672 DMDP11532 3685 aa16.38■□□□□ 0.21
CSNK1D-224ENST00000584672 GCOM1H8Y6P7 765 aaPredicted RBP16.37■□□□□ 0.21
CSNK1D-224ENST00000584672 POLR2MP0CAP2 368 aa16.37■□□□□ 0.21
CSNK1D-224ENST00000584672 ATF7P17544 494 aaPredicted RBP16.37■□□□□ 0.21
CSNK1D-224ENST00000584672 IGBP1P78318 339 aa16.37■□□□□ 0.21
CSNK1D-224ENST00000584672 TMEM62Q0P6H9 643 aa16.37■□□□□ 0.21
CSNK1D-224ENST00000584672 PPFIA1Q13136 1202 aa16.37■□□□□ 0.21
CSNK1D-224ENST00000584672 NEDD9Q14511 834 aa16.37■□□□□ 0.21
CSNK1D-224ENST00000584672 GNPTABQ3T906 1256 aa16.37■□□□□ 0.21
CSNK1D-224ENST00000584672 NAALADL2Q58DX5 795 aa16.37■□□□□ 0.21
CSNK1D-224ENST00000584672 SPOUT1Q5T280 376 aaKnown RBP16.37■□□□□ 0.21
CSNK1D-224ENST00000584672 RSPH3Q86UC2 560 aa16.37■□□□□ 0.21
CSNK1D-224ENST00000584672 NPAS4Q8IUM7 802 aa16.37■□□□□ 0.21
CSNK1D-224ENST00000584672 KREMEN2Q8NCW0 462 aa16.37■□□□□ 0.21
CSNK1D-224ENST00000584672 NEK1Q96PY6 1258 aa16.37■□□□□ 0.21
CSNK1D-224ENST00000584672 HCSTQ9UBK5 93 aa16.37■□□□□ 0.21
CSNK1D-224ENST00000584672 TUBE1Q9UJT0 475 aa16.37■□□□□ 0.21
CSNK1D-224ENST00000584672 RCAN3Q9UKA8 241 aa16.37■□□□□ 0.21
CSNK1D-224ENST00000584672 NRCAMQ92823 1304 aa16.37■□□□□ 0.21
CSNK1D-224ENST00000584672 SALL3Q9BXA9 1300 aa16.37■□□□□ 0.21
CSNK1D-224ENST00000584672 BAZ2BQ9UIF8 2168 aaKnown RBP16.37■□□□□ 0.21
CSNK1D-224ENST00000584672 VPS13AQ96RL7 3174 aa16.36■□□□□ 0.21
CSNK1D-224ENST00000584672 SPATA31C2B4DYI2 1134 aa16.36■□□□□ 0.21
CSNK1D-224ENST00000584672 ZBTB5O15062 677 aa16.36■□□□□ 0.21
CSNK1D-224ENST00000584672 PCP11498 1178 aaKnown RBP16.36■□□□□ 0.21
CSNK1D-224ENST00000584672 NBL1P41271 181 aa16.36■□□□□ 0.21
CSNK1D-224ENST00000584672 ERVFC1P60507 584 aa16.36■□□□□ 0.21
CSNK1D-224ENST00000584672 MRPS6P82932 125 aaKnown RBP16.36■□□□□ 0.21
CSNK1D-224ENST00000584672 APOBRQ0VD83 1088 aa16.36■□□□□ 0.21
CSNK1D-224ENST00000584672 GRIK4Q16099 956 aa16.36■□□□□ 0.21
CSNK1D-224ENST00000584672 TAF2Q6P1X5 1199 aa16.36■□□□□ 0.21
CSNK1D-224ENST00000584672 ERMP1Q7Z2K6 904 aa16.36■□□□□ 0.21
CSNK1D-224ENST00000584672 DCHS1Q96JQ0 3298 aa16.36■□□□□ 0.21
CSNK1D-224ENST00000584672 MYO10Q9HD67 2058 aa16.36■□□□□ 0.21
CSNK1D-224ENST00000584672 KLRF2D3W0D1 207 aa16.35■□□□□ 0.21
CSNK1D-224ENST00000584672 ZNF213O14771 459 aa16.35■□□□□ 0.21
CSNK1D-224ENST00000584672 FIBPO43427 364 aa16.35■□□□□ 0.21
CSNK1D-224ENST00000584672 BRD1O95696 1058 aa16.35■□□□□ 0.21
CSNK1D-224ENST00000584672 TECP42680 631 aa16.35■□□□□ 0.21
CSNK1D-224ENST00000584672 DUSP6Q16828 381 aa16.35■□□□□ 0.21
CSNK1D-224ENST00000584672 CCDC178Q5BJE1 867 aa16.35■□□□□ 0.21
CSNK1D-224ENST00000584672 PLPP4Q5VZY2 271 aa16.35■□□□□ 0.21
CSNK1D-224ENST00000584672 ADSSL1Q8N142 457 aa16.35■□□□□ 0.21
CSNK1D-224ENST00000584672 ATP8B4Q8TF62 1192 aa16.35■□□□□ 0.21
CSNK1D-224ENST00000584672 INPP4AQ96PE3 977 aaPredicted RBP16.35■□□□□ 0.21
CSNK1D-224ENST00000584672 PIGSQ96S52 555 aa16.35■□□□□ 0.21
CSNK1D-224ENST00000584672 LRFN2Q9ULH4 789 aa16.35■□□□□ 0.21
CSNK1D-224ENST00000584672 GVINP1Q7Z2Y8 2422 aa16.35■□□□□ 0.21
CSNK1D-224ENST00000584672 FNDC1Q4ZHG4 1894 aaPredicted RBP16.34■□□□□ 0.21
CSNK1D-224ENST00000584672 STAG3L1P0CL83 205 aa16.34■□□□□ 0.21
CSNK1D-224ENST00000584672 SCG2P13521 617 aa16.34■□□□□ 0.21
CSNK1D-224ENST00000584672 TCF7P36402 384 aaPredicted RBP16.34■□□□□ 0.21
CSNK1D-224ENST00000584672 SLC35G1Q2M3R5 365 aa16.34■□□□□ 0.21
CSNK1D-224ENST00000584672 CRIPAKQ8N1N5 446 aa16.34■□□□□ 0.21
CSNK1D-224ENST00000584672 PIBF1Q8WXW3 757 aa16.34■□□□□ 0.21
CSNK1D-224ENST00000584672 NKD2Q969F2 451 aaPredicted RBP16.34■□□□□ 0.21
CSNK1D-224ENST00000584672 S1PR5Q9H228 398 aa16.34■□□□□ 0.21
CSNK1D-224ENST00000584672 MAP3K20Q9NYL2 800 aaKnown RBP16.34■□□□□ 0.21
CSNK1D-224ENST00000584672 PKD2L1Q9P0L9 805 aa16.34■□□□□ 0.21
CSNK1D-224ENST00000584672 PADI3Q9ULW8 664 aa16.34■□□□□ 0.21
CSNK1D-224ENST00000584672 PCDHB15Q9Y5E8 787 aa16.34■□□□□ 0.21
CSNK1D-224ENST00000584672 FGF18O76093 207 aa16.33■□□□□ 0.2
CSNK1D-224ENST00000584672 TMEM266Q2M3C6 531 aa16.33■□□□□ 0.2
CSNK1D-224ENST00000584672 MARCH8Q5T0T0 291 aa16.33■□□□□ 0.2
CSNK1D-224ENST00000584672 ANKRD54Q6NXT1 300 aa16.33■□□□□ 0.2
CSNK1D-224ENST00000584672 MTMR8Q96EF0 704 aa16.33■□□□□ 0.2
CSNK1D-224ENST00000584672 ZSWIM5Q9P217 1185 aa16.33■□□□□ 0.2
CSNK1D-224ENST00000584672 MAD2L2Q9UI95 211 aa16.33■□□□□ 0.2
CSNK1D-224ENST00000584672 PCDHB12Q9Y5F1 795 aa16.33■□□□□ 0.2
CSNK1D-224ENST00000584672 WDR87Q6ZQQ6 2873 aa16.32■□□□□ 0.2
CSNK1D-224ENST00000584672 TBKBP1A7MCY6 615 aa16.32■□□□□ 0.2
CSNK1D-224ENST00000584672 C2CD4DB7Z1M9 353 aa16.32■□□□□ 0.2
CSNK1D-224ENST00000584672 ASGR2P07307 311 aa16.32■□□□□ 0.2
CSNK1D-224ENST00000584672 NUBP1P53384 320 aa16.32■□□□□ 0.2
CSNK1D-224ENST00000584672 PAK2Q13177 524 aa16.32■□□□□ 0.2
CSNK1D-224ENST00000584672 MTMR3Q13615 1198 aa16.32■□□□□ 0.2
CSNK1D-224ENST00000584672 IFIT1BQ5T764 474 aaKnown RBP16.32■□□□□ 0.2
CSNK1D-224ENST00000584672 ANKRD45Q5TZF3 282 aa16.32■□□□□ 0.2
CSNK1D-224ENST00000584672 SYCE2Q6PIF2 218 aa16.32■□□□□ 0.2
CSNK1D-224ENST00000584672 THNSL1Q8IYQ7 743 aa16.32■□□□□ 0.2
CSNK1D-224ENST00000584672 UBAC1Q9BSL1 405 aa16.32■□□□□ 0.2
CSNK1D-224ENST00000584672 TMEM260Q9NX78 707 aa16.32■□□□□ 0.2
CSNK1D-224ENST00000584672 ZBTB47Q9UFB7 747 aaPredicted RBP16.32■□□□□ 0.2
CSNK1D-224ENST00000584672 SORCS3Q9UPU3 1222 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms