RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 DLG3Q92796 817 aa7.75□□□□□ -1.17
SMARCE1-219ENST00000583294 SGPP1Q9BX95 441 aa7.75□□□□□ -1.17
SMARCE1-219ENST00000583294 EMC7Q9NPA0 242 aa7.75□□□□□ -1.17
SMARCE1-219ENST00000583294 KCNH7Q9NS40 1196 aa7.75□□□□□ -1.17
SMARCE1-219ENST00000583294 ZEB2O60315 1214 aa7.74□□□□□ -1.17
SMARCE1-219ENST00000583294 BRINP1O60477 761 aa7.74□□□□□ -1.17
SMARCE1-219ENST00000583294 KRT1P04264 644 aa7.74□□□□□ -1.17
SMARCE1-219ENST00000583294 C1QTNF9P0C862 333 aa7.74□□□□□ -1.17
SMARCE1-219ENST00000583294 GJA4P35212 333 aa7.74□□□□□ -1.17
SMARCE1-219ENST00000583294 OCRLQ01968 901 aa7.74□□□□□ -1.17
SMARCE1-219ENST00000583294 FBLN7Q53RD9 439 aa7.74□□□□□ -1.17
SMARCE1-219ENST00000583294 CD300LDQ6UXZ3 194 aa7.74□□□□□ -1.17
SMARCE1-219ENST00000583294 ETV3LQ6ZN32 361 aa7.74□□□□□ -1.17
SMARCE1-219ENST00000583294 C11orf74Q86VG3 221 aa7.74□□□□□ -1.17
SMARCE1-219ENST00000583294 TOE1Q96GM8 510 aaKnown RBP7.74□□□□□ -1.17
SMARCE1-219ENST00000583294 ELF4Q99607 663 aaPredicted RBP7.74□□□□□ -1.17
SMARCE1-219ENST00000583294 MCOLN1Q9GZU1 580 aa7.74□□□□□ -1.17
SMARCE1-219ENST00000583294 CNTD2Q9H8S5 307 aa7.74□□□□□ -1.17
SMARCE1-219ENST00000583294 TOMM22Q9NS69 142 aa7.74□□□□□ -1.17
SMARCE1-219ENST00000583294 DTLQ9NZJ0 730 aa7.74□□□□□ -1.17
SMARCE1-219ENST00000583294 HRKO00198 91 aa7.73□□□□□ -1.17
SMARCE1-219ENST00000583294 GPR39O43194 453 aa7.73□□□□□ -1.17
SMARCE1-219ENST00000583294 TSPAN15O95858 294 aa7.73□□□□□ -1.17
SMARCE1-219ENST00000583294 LRG1P02750 347 aa7.73□□□□□ -1.17
SMARCE1-219ENST00000583294 FAHP16930 419 aa7.73□□□□□ -1.17
SMARCE1-219ENST00000583294 CFPP27918 469 aa7.73□□□□□ -1.17
SMARCE1-219ENST00000583294 MC3RP41968 323 aa7.73□□□□□ -1.17
SMARCE1-219ENST00000583294 LCE4AQ5TA78 99 aa7.73□□□□□ -1.17
SMARCE1-219ENST00000583294 LDHDQ86WU2 507 aa7.73□□□□□ -1.17
SMARCE1-219ENST00000583294 MIB1Q86YT6 1006 aa7.73□□□□□ -1.17
SMARCE1-219ENST00000583294 EFHBQ8N7U6 833 aa7.73□□□□□ -1.17
SMARCE1-219ENST00000583294 FBXO15Q8NCQ5 510 aaPredicted RBP7.73□□□□□ -1.17
SMARCE1-219ENST00000583294 TTLL11Q8NHH1 800 aa7.73□□□□□ -1.17
SMARCE1-219ENST00000583294 DDX11Q96FC9 970 aa7.73□□□□□ -1.17
SMARCE1-219ENST00000583294 RBPJLQ9UBG7 517 aa7.73□□□□□ -1.17
SMARCE1-219ENST00000583294 APOBEC2Q9Y235 224 aaKnown RBP7.73□□□□□ -1.17
SMARCE1-219ENST00000583294 TGM5O43548 720 aa7.72□□□□□ -1.17
SMARCE1-219ENST00000583294 PEX10O60683 326 aa7.72□□□□□ -1.17
SMARCE1-219ENST00000583294 NCAM1P13591 858 aa7.72□□□□□ -1.17
SMARCE1-219ENST00000583294 PTX3P26022 381 aaPredicted RBP7.72□□□□□ -1.17
SMARCE1-219ENST00000583294 CDR1P51861 262 aa7.72□□□□□ -1.17
SMARCE1-219ENST00000583294 RNF219Q5W0B1 726 aaPredicted RBP7.72□□□□□ -1.17
SMARCE1-219ENST00000583294 TEPPQ6URK8 271 aa7.72□□□□□ -1.17
SMARCE1-219ENST00000583294 HDGFL2Q7Z4V5 671 aaPredicted RBP7.72□□□□□ -1.17
SMARCE1-219ENST00000583294 PASD1Q8IV76 773 aa7.72□□□□□ -1.17
SMARCE1-219ENST00000583294 COG1Q8WTW3 980 aa7.72□□□□□ -1.17
SMARCE1-219ENST00000583294 ERCC4Q92889 916 aaPredicted RBP7.72□□□□□ -1.17
SMARCE1-219ENST00000583294 PPP1R16BQ96T49 567 aa7.72□□□□□ -1.17
SMARCE1-219ENST00000583294 SYT3Q9BQG1 590 aa7.72□□□□□ -1.17
SMARCE1-219ENST00000583294 ACSS2Q9NR19 701 aa7.72□□□□□ -1.17
SMARCE1-219ENST00000583294 HOMER2Q9NSB8 354 aa7.72□□□□□ -1.17
SMARCE1-219ENST00000583294 SLC5A4Q9NY91 659 aa7.72□□□□□ -1.17
SMARCE1-219ENST00000583294 MBD1Q9UIS9 605 aaPredicted RBP7.72□□□□□ -1.17
SMARCE1-219ENST00000583294 SPO11Q9Y5K1 396 aa7.72□□□□□ -1.17
SMARCE1-219ENST00000583294 FOXP2O15409 715 aa7.71□□□□□ -1.18
SMARCE1-219ENST00000583294 MMEP08473 750 aa7.71□□□□□ -1.18
SMARCE1-219ENST00000583294 FBLN1P23142 703 aa7.71□□□□□ -1.18
SMARCE1-219ENST00000583294 GUCY2FP51841 1108 aa7.71□□□□□ -1.18
SMARCE1-219ENST00000583294 CR1LQ2VPA4 569 aa7.71□□□□□ -1.18
SMARCE1-219ENST00000583294 CC2D1AQ6P1N0 951 aaPredicted RBP7.71□□□□□ -1.18
SMARCE1-219ENST00000583294 KRTAP4-7Q9BYR0 210 aa7.71□□□□□ -1.18
SMARCE1-219ENST00000583294 MS4A5Q9H3V2 200 aa7.71□□□□□ -1.18
SMARCE1-219ENST00000583294 PHLDB1Q86UU1 1377 aa7.71□□□□□ -1.18
SMARCE1-219ENST00000583294 TEX51A0A1B0GUA7 166 aa7.7□□□□□ -1.18
SMARCE1-219ENST00000583294 RASSF10A6NK89 507 aa7.7□□□□□ -1.18
SMARCE1-219ENST00000583294 C8BP07358 591 aa7.7□□□□□ -1.18
SMARCE1-219ENST00000583294 ATF2P15336 505 aa7.7□□□□□ -1.18
SMARCE1-219ENST00000583294 EPHB3P54753 998 aa7.7□□□□□ -1.18
SMARCE1-219ENST00000583294 NKX3-2P78367 333 aa7.7□□□□□ -1.18
SMARCE1-219ENST00000583294 CACNB2Q08289 660 aaPredicted RBP7.7□□□□□ -1.18
SMARCE1-219ENST00000583294 TARBP2Q15633 366 aaKnown RBP7.7□□□□□ -1.18
SMARCE1-219ENST00000583294 DDB1Q16531 1140 aa7.7□□□□□ -1.18
SMARCE1-219ENST00000583294 CATSPEREQ5SY80 951 aa7.7□□□□□ -1.18
SMARCE1-219ENST00000583294 IQSEC1Q6DN90 963 aa7.7□□□□□ -1.18
SMARCE1-219ENST00000583294 STK32CQ86UX6 486 aa7.7□□□□□ -1.18
SMARCE1-219ENST00000583294 ZC3H18Q86VM9 953 aaKnown RBP7.7□□□□□ -1.18
SMARCE1-219ENST00000583294 SPATS2Q86XZ4 545 aaKnown RBP7.7□□□□□ -1.18
SMARCE1-219ENST00000583294 C1QL4Q86Z23 238 aa7.7□□□□□ -1.18
SMARCE1-219ENST00000583294 SLC5A5Q92911 643 aa7.7□□□□□ -1.18
SMARCE1-219ENST00000583294 TOX2Q96NM4 488 aa7.7□□□□□ -1.18
SMARCE1-219ENST00000583294 PDGFDQ9GZP0 370 aaPredicted RBP7.7□□□□□ -1.18
SMARCE1-219ENST00000583294 DDX56Q9NY93 547 aaKnown RBP7.7□□□□□ -1.18
SMARCE1-219ENST00000583294 PCDHA5Q9Y5H7 936 aa7.7□□□□□ -1.18
SMARCE1-219ENST00000583294 IRS2Q9Y4H2 1338 aa7.7□□□□□ -1.18
SMARCE1-219ENST00000583294 NFIBO00712 420 aa7.69□□□□□ -1.18
SMARCE1-219ENST00000583294 KATNA1O75449 491 aa7.69□□□□□ -1.18
SMARCE1-219ENST00000583294 BROXQ5VW32 411 aa7.69□□□□□ -1.18
SMARCE1-219ENST00000583294 CD276Q5ZPR3 534 aa7.69□□□□□ -1.18
SMARCE1-219ENST00000583294 TMC5Q6UXY8 1006 aa7.69□□□□□ -1.18
SMARCE1-219ENST00000583294 SMARCC2Q8TAQ2 1214 aa7.69□□□□□ -1.18
SMARCE1-219ENST00000583294 MZB1Q8WU39 189 aa7.69□□□□□ -1.18
SMARCE1-219ENST00000583294 STAG1Q8WVM7 1258 aa7.69□□□□□ -1.18
SMARCE1-219ENST00000583294 CPA5Q8WXQ8 436 aa7.69□□□□□ -1.18
SMARCE1-219ENST00000583294 KCNN1Q92952 543 aa7.69□□□□□ -1.18
SMARCE1-219ENST00000583294 GBP4Q96PP9 640 aa7.69□□□□□ -1.18
SMARCE1-219ENST00000583294 SLC39A2Q9NP94 309 aa7.69□□□□□ -1.18
SMARCE1-219ENST00000583294 ARHGAP28Q9P2N2 729 aa7.69□□□□□ -1.18
SMARCE1-219ENST00000583294 FAN1Q9Y2M0 1017 aa7.69□□□□□ -1.18
SMARCE1-219ENST00000583294 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.68□□□□□ -1.18
SMARCE1-219ENST00000583294 LCHNA4D1U4 455 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms