RNA–Protein interactions for RNA: ENST00000582288.1

TVP23B-210, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-210ENST00000582288 USP26Q9BXU7 913 aa7.28□□□□□ -1.24
TVP23B-210ENST00000582288 SEMA4AQ9H3S1 761 aa7.28□□□□□ -1.24
TVP23B-210ENST00000582288 RNPEPQ9H4A4 650 aa7.28□□□□□ -1.24
TVP23B-210ENST00000582288 GPCPD1Q9NPB8 672 aa7.28□□□□□ -1.24
TVP23B-210ENST00000582288 INCENPQ9NQS7 918 aa7.28□□□□□ -1.24
TVP23B-210ENST00000582288 PXMP2Q9NR77 195 aa7.28□□□□□ -1.24
TVP23B-210ENST00000582288 COL20A1Q9P218 1284 aa7.28□□□□□ -1.24
TVP23B-210ENST00000582288 DMXL1Q9Y485 3027 aa7.28□□□□□ -1.24
TVP23B-210ENST00000582288 FRMPD2Q68DX3 1309 aaPredicted RBP7.27□□□□□ -1.24
TVP23B-210ENST00000582288 PPP1R3GB7ZBB8 358 aa7.27□□□□□ -1.25
TVP23B-210ENST00000582288 ENPP3O14638 875 aa7.27□□□□□ -1.25
TVP23B-210ENST00000582288 TREHO43280 583 aa7.27□□□□□ -1.25
TVP23B-210ENST00000582288 KDM4AO75164 1064 aa7.27□□□□□ -1.25
TVP23B-210ENST00000582288 GLP2RO95838 553 aa7.27□□□□□ -1.25
TVP23B-210ENST00000582288 ITGB1P05556 798 aa7.27□□□□□ -1.25
TVP23B-210ENST00000582288 SMIM10L2AP0DMW4 78 aa7.27□□□□□ -1.25
TVP23B-210ENST00000582288 SMIM10L2BP0DMW5 78 aa7.27□□□□□ -1.25
TVP23B-210ENST00000582288 DNAJB1P25685 340 aa7.27□□□□□ -1.25
TVP23B-210ENST00000582288 NRIP1P48552 1158 aa7.27□□□□□ -1.25
TVP23B-210ENST00000582288 HSD17B4P51659 736 aa7.27□□□□□ -1.25
TVP23B-210ENST00000582288 MTMR3Q13615 1198 aa7.27□□□□□ -1.25
TVP23B-210ENST00000582288 ALX1Q15699 326 aa7.27□□□□□ -1.25
TVP23B-210ENST00000582288 ZMYM1Q5SVZ6 1142 aa7.27□□□□□ -1.25
TVP23B-210ENST00000582288 TAF2Q6P1X5 1199 aa7.27□□□□□ -1.25
TVP23B-210ENST00000582288 STOX1Q6ZVD7 989 aa7.27□□□□□ -1.25
TVP23B-210ENST00000582288 ADGRD2Q7Z7M1 963 aa7.27□□□□□ -1.25
TVP23B-210ENST00000582288 VSIG10LQ86VR7 867 aa7.27□□□□□ -1.25
TVP23B-210ENST00000582288 TICAM2Q86XR7 235 aa7.27□□□□□ -1.25
TVP23B-210ENST00000582288 RASGRP4Q8TDF6 673 aa7.27□□□□□ -1.25
TVP23B-210ENST00000582288 POF1BQ8WVV4 589 aa7.27□□□□□ -1.25
TVP23B-210ENST00000582288 RPGRIP1Q96KN7 1286 aa7.27□□□□□ -1.25
TVP23B-210ENST00000582288 NEK1Q96PY6 1258 aa7.27□□□□□ -1.25
TVP23B-210ENST00000582288 FTHL17Q9BXU8 183 aa7.27□□□□□ -1.25
TVP23B-210ENST00000582288 TLE6Q9H808 572 aa7.27□□□□□ -1.25
TVP23B-210ENST00000582288 TSR3Q9UJK0 312 aaKnown RBP7.27□□□□□ -1.25
TVP23B-210ENST00000582288 SORCS3Q9UPU3 1222 aa7.27□□□□□ -1.25
TVP23B-210ENST00000582288 MTMR7Q9Y216 660 aa7.27□□□□□ -1.25
TVP23B-210ENST00000582288 MRPL11Q9Y3B7 192 aaKnown RBP7.27□□□□□ -1.25
TVP23B-210ENST00000582288 NR2E1Q9Y466 385 aa7.27□□□□□ -1.25
TVP23B-210ENST00000582288 SQORQ9Y6N5 450 aa7.27□□□□□ -1.25
TVP23B-210ENST00000582288 DNAH14Q0VDD8 3507 aa7.27□□□□□ -1.25
TVP23B-210ENST00000582288 TTC41PQ6P2S7 1318 aa7.27□□□□□ -1.25
TVP23B-210ENST00000582288 CCDC171Q6TFL3 1326 aa7.27□□□□□ -1.25
TVP23B-210ENST00000582288 NRCAMQ92823 1304 aa7.27□□□□□ -1.25
TVP23B-210ENST00000582288 CCER2I3L3R5 266 aa7.26□□□□□ -1.25
TVP23B-210ENST00000582288 FOXP2O15409 715 aa7.26□□□□□ -1.25
TVP23B-210ENST00000582288 STAM2O75886 525 aa7.26□□□□□ -1.25
TVP23B-210ENST00000582288 GGPS1O95749 300 aa7.26□□□□□ -1.25
TVP23B-210ENST00000582288 CHRNA1P02708 482 aa7.26□□□□□ -1.25
TVP23B-210ENST00000582288 LGALS2P05162 132 aa7.26□□□□□ -1.25
TVP23B-210ENST00000582288 HOXB8P17481 243 aaPredicted RBP7.26□□□□□ -1.25
TVP23B-210ENST00000582288 CTDSPL2Q05D32 466 aa7.26□□□□□ -1.25
TVP23B-210ENST00000582288 KCNC3Q14003 757 aa7.26□□□□□ -1.25
TVP23B-210ENST00000582288 DUSP6Q16828 381 aa7.26□□□□□ -1.25
TVP23B-210ENST00000582288 USH1GQ495M9 461 aa7.26□□□□□ -1.25
TVP23B-210ENST00000582288 RSPH3Q86UC2 560 aa7.26□□□□□ -1.25
TVP23B-210ENST00000582288 DGKHQ86XP1 1220 aa7.26□□□□□ -1.25
TVP23B-210ENST00000582288 NPAS4Q8IUM7 802 aa7.26□□□□□ -1.25
TVP23B-210ENST00000582288 ADSSL1Q8N142 457 aa7.26□□□□□ -1.25
TVP23B-210ENST00000582288 TMEM105Q8N8V8 129 aa7.26□□□□□ -1.25
TVP23B-210ENST00000582288 KLHL23Q8NBE8 558 aa7.26□□□□□ -1.25
TVP23B-210ENST00000582288 PANK1Q8TE04 598 aa7.26□□□□□ -1.25
TVP23B-210ENST00000582288 TBC1D5Q92609 795 aa7.26□□□□□ -1.25
TVP23B-210ENST00000582288 NECTIN4Q96NY8 510 aa7.26□□□□□ -1.25
TVP23B-210ENST00000582288 SEC62Q99442 399 aaKnown RBP7.26□□□□□ -1.25
TVP23B-210ENST00000582288 PDCD2LQ9BRP1 358 aa7.26□□□□□ -1.25
TVP23B-210ENST00000582288 ADAM33Q9BZ11 813 aa7.26□□□□□ -1.25
TVP23B-210ENST00000582288 OSBPL7Q9BZF2 842 aa7.26□□□□□ -1.25
TVP23B-210ENST00000582288 S1PR5Q9H228 398 aa7.26□□□□□ -1.25
TVP23B-210ENST00000582288 MLXIPQ9HAP2 919 aa7.26□□□□□ -1.25
TVP23B-210ENST00000582288 ZNF215Q9UL58 517 aaPredicted RBP7.26□□□□□ -1.25
TVP23B-210ENST00000582288 BARX2Q9UMQ3 279 aaPredicted RBP7.26□□□□□ -1.25
TVP23B-210ENST00000582288 MRPL42Q9Y6G3 142 aaKnown RBP7.26□□□□□ -1.25
TVP23B-210ENST00000582288 ZDBF2Q9HCK1 2354 aa7.26□□□□□ -1.25
TVP23B-210ENST00000582288 FRYLO94915 3013 aa7.26□□□□□ -1.25
TVP23B-210ENST00000582288 ZMYM6O95789 1325 aa7.26□□□□□ -1.25
TVP23B-210ENST00000582288 ZFHX4Q86UP3 3567 aa7.25□□□□□ -1.25
TVP23B-210ENST00000582288 NOP56O00567 594 aaKnown RBP7.25□□□□□ -1.25
TVP23B-210ENST00000582288 PDGFBP01127 241 aaPredicted RBP7.25□□□□□ -1.25
TVP23B-210ENST00000582288 CTSHP09668 335 aa7.25□□□□□ -1.25
TVP23B-210ENST00000582288 STAG3L1P0CL83 205 aa7.25□□□□□ -1.25
TVP23B-210ENST00000582288 EIF2AK2P19525 551 aaKnown RBP7.25□□□□□ -1.25
TVP23B-210ENST00000582288 UBA1P22314 1058 aaKnown RBP7.25□□□□□ -1.25
TVP23B-210ENST00000582288 SP2Q02086 613 aa7.25□□□□□ -1.25
TVP23B-210ENST00000582288 MGAT3Q09327 533 aa7.25□□□□□ -1.25
TVP23B-210ENST00000582288 TRAF1Q13077 416 aa7.25□□□□□ -1.25
TVP23B-210ENST00000582288 NEDD9Q14511 834 aa7.25□□□□□ -1.25
TVP23B-210ENST00000582288 PUM1Q14671 1186 aaKnown RBP eCLIP7.25□□□□□ -1.25
TVP23B-210ENST00000582288 LPIN1Q14693 890 aa7.25□□□□□ -1.25
TVP23B-210ENST00000582288 CDC37Q16543 378 aaPredicted RBP7.25□□□□□ -1.25
TVP23B-210ENST00000582288 ASPRV1Q53RT3 343 aa7.25□□□□□ -1.25
TVP23B-210ENST00000582288 CCDC178Q5BJE1 867 aa7.25□□□□□ -1.25
TVP23B-210ENST00000582288 METTL7BQ6UX53 244 aa7.25□□□□□ -1.25
TVP23B-210ENST00000582288 TSHZ1Q6ZSZ6 1077 aa7.25□□□□□ -1.25
TVP23B-210ENST00000582288 FRMD5Q7Z6J6 570 aa7.25□□□□□ -1.25
TVP23B-210ENST00000582288 ZBTB33Q86T24 672 aa7.25□□□□□ -1.25
TVP23B-210ENST00000582288 KREMEN2Q8NCW0 462 aa7.25□□□□□ -1.25
TVP23B-210ENST00000582288 LMBR1Q8WVP7 490 aa7.25□□□□□ -1.25
TVP23B-210ENST00000582288 AAASQ9NRG9 546 aa7.25□□□□□ -1.25
TVP23B-210ENST00000582288 SPTBN4Q9H254 2564 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms