RNA–Protein interactions for RNA: ENST00000578630.1

ERBB2-208, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 874 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-208ENST00000578630 KIAA0355O15063 1070 aa12.98□□□□□ -0.33
ERBB2-208ENST00000578630 HBP1O60381 514 aa12.98□□□□□ -0.33
ERBB2-208ENST00000578630 B4GALT4O60513 344 aa12.98□□□□□ -0.33
ERBB2-208ENST00000578630 SMIM10L2AP0DMW4 78 aa12.98□□□□□ -0.33
ERBB2-208ENST00000578630 SMIM10L2BP0DMW5 78 aa12.98□□□□□ -0.33
ERBB2-208ENST00000578630 RAG1P15918 1043 aa12.98□□□□□ -0.33
ERBB2-208ENST00000578630 MARK3P27448 753 aa12.98□□□□□ -0.33
ERBB2-208ENST00000578630 TOB1P50616 345 aaPredicted RBP12.98□□□□□ -0.33
ERBB2-208ENST00000578630 EPHA7Q15375 998 aa12.98□□□□□ -0.33
ERBB2-208ENST00000578630 TRIM50Q86XT4 487 aa12.98□□□□□ -0.33
ERBB2-208ENST00000578630 RETREG2Q8NC44 543 aa12.98□□□□□ -0.33
ERBB2-208ENST00000578630 ATP6V0A1Q93050 837 aa12.98□□□□□ -0.33
ERBB2-208ENST00000578630 PCYT2Q99447 389 aa12.98□□□□□ -0.33
ERBB2-208ENST00000578630 TRMT13Q9NUP7 481 aaKnown RBP12.98□□□□□ -0.33
ERBB2-208ENST00000578630 ZMYND8Q9ULU4 1186 aaPredicted RBP12.98□□□□□ -0.33
ERBB2-208ENST00000578630 TRPC6Q9Y210 931 aa12.98□□□□□ -0.33
ERBB2-208ENST00000578630 MAFBQ9Y5Q3 323 aaPredicted RBP12.98□□□□□ -0.33
ERBB2-208ENST00000578630 POTEB3A0JP26 581 aa12.97□□□□□ -0.33
ERBB2-208ENST00000578630 H0YGN5 161 aa12.97□□□□□ -0.33
ERBB2-208ENST00000578630 LAD1O00515 517 aa12.97□□□□□ -0.33
ERBB2-208ENST00000578630 P4HBP07237 508 aaKnown RBP12.97□□□□□ -0.33
ERBB2-208ENST00000578630 OR52Z1P0C646 297 aa12.97□□□□□ -0.33
ERBB2-208ENST00000578630 SYN1P17600 705 aa12.97□□□□□ -0.33
ERBB2-208ENST00000578630 PPFIA1Q13136 1202 aa12.97□□□□□ -0.33
ERBB2-208ENST00000578630 PTGDRQ13258 359 aa12.97□□□□□ -0.33
ERBB2-208ENST00000578630 BFSP2Q13515 415 aa12.97□□□□□ -0.33
ERBB2-208ENST00000578630 GDF6Q6KF10 455 aaPredicted RBP12.97□□□□□ -0.33
ERBB2-208ENST00000578630 POTEBQ6S5H4 581 aa12.97□□□□□ -0.33
ERBB2-208ENST00000578630 B3GNT9Q6UX72 402 aa12.97□□□□□ -0.33
ERBB2-208ENST00000578630 FERMT3Q86UX7 667 aa12.97□□□□□ -0.33
ERBB2-208ENST00000578630 CCDC60Q8IWA6 550 aaPredicted RBP12.97□□□□□ -0.33
ERBB2-208ENST00000578630 CCDC155Q8N6L0 562 aa12.97□□□□□ -0.33
ERBB2-208ENST00000578630 PPP1R13LQ8WUF5 828 aa12.97□□□□□ -0.33
ERBB2-208ENST00000578630 BBXQ8WY36 941 aaPredicted RBP12.97□□□□□ -0.33
ERBB2-208ENST00000578630 FAM167AQ96KS9 214 aa12.97□□□□□ -0.33
ERBB2-208ENST00000578630 RAB34Q9BZG1 259 aa12.97□□□□□ -0.33
ERBB2-208ENST00000578630 PDLIM7Q9NR12 457 aa12.97□□□□□ -0.33
ERBB2-208ENST00000578630 SETD4Q9NVD3 440 aa12.97□□□□□ -0.33
ERBB2-208ENST00000578630 DAXXQ9UER7 740 aaPredicted RBP12.97□□□□□ -0.33
ERBB2-208ENST00000578630 CEP131Q9UPN4 1083 aa12.97□□□□□ -0.33
ERBB2-208ENST00000578630 PCDHB6Q9Y5E3 794 aa12.97□□□□□ -0.33
ERBB2-208ENST00000578630 TRIM43BA6NCK2 446 aa12.96□□□□□ -0.33
ERBB2-208ENST00000578630 WNT7AO00755 349 aa12.96□□□□□ -0.33
ERBB2-208ENST00000578630 BMP15O95972 392 aa12.96□□□□□ -0.33
ERBB2-208ENST00000578630 TIMP1P01033 207 aa12.96□□□□□ -0.33
ERBB2-208ENST00000578630 INSRRP14616 1297 aa12.96□□□□□ -0.33
ERBB2-208ENST00000578630 PSMC5P62195 406 aa12.96□□□□□ -0.33
ERBB2-208ENST00000578630 PTK7Q13308 1070 aa12.96□□□□□ -0.33
ERBB2-208ENST00000578630 PLCB4Q15147 1175 aa12.96□□□□□ -0.33
ERBB2-208ENST00000578630 TMEM266Q2M3C6 531 aa12.96□□□□□ -0.33
ERBB2-208ENST00000578630 ZNF484Q5JVG2 852 aa12.96□□□□□ -0.33
ERBB2-208ENST00000578630 NCAPH2Q6IBW4 605 aa12.96□□□□□ -0.33
ERBB2-208ENST00000578630 SH3RF1Q7Z6J0 888 aa12.96□□□□□ -0.33
ERBB2-208ENST00000578630 ATP8B4Q8TF62 1192 aa12.96□□□□□ -0.33
ERBB2-208ENST00000578630 TRIM43Q96BQ3 446 aaPredicted RBP12.96□□□□□ -0.33
ERBB2-208ENST00000578630 TMEM60Q9H2L4 133 aa12.96□□□□□ -0.33
ERBB2-208ENST00000578630 HIPK3Q9H422 1215 aa12.96□□□□□ -0.33
ERBB2-208ENST00000578630 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.96□□□□□ -0.33
ERBB2-208ENST00000578630 VAV3Q9UKW4 847 aa12.96□□□□□ -0.33
ERBB2-208ENST00000578630 MTMR6Q9Y217 621 aa12.96□□□□□ -0.33
ERBB2-208ENST00000578630 STK24Q9Y6E0 443 aa12.96□□□□□ -0.33
ERBB2-208ENST00000578630 PDE4DIPQ5VU43 2346 aa12.96□□□□□ -0.34
ERBB2-208ENST00000578630 SCN10AQ9Y5Y9 1956 aa12.96□□□□□ -0.34
ERBB2-208ENST00000578630 MKI67P46013 3256 aaKnown RBP12.96□□□□□ -0.34
ERBB2-208ENST00000578630 EML1O00423 815 aa12.95□□□□□ -0.34
ERBB2-208ENST00000578630 RPLP2P05387 115 aaKnown RBP12.95□□□□□ -0.34
ERBB2-208ENST00000578630 CYP2C9P11712 490 aa12.95□□□□□ -0.34
ERBB2-208ENST00000578630 TECP42680 631 aa12.95□□□□□ -0.34
ERBB2-208ENST00000578630 QARSP47897 775 aaKnown RBP12.95□□□□□ -0.34
ERBB2-208ENST00000578630 IGBP1P78318 339 aa12.95□□□□□ -0.34
ERBB2-208ENST00000578630 PDIA5Q14554 519 aa12.95□□□□□ -0.34
ERBB2-208ENST00000578630 NBR1Q14596 966 aa12.95□□□□□ -0.34
ERBB2-208ENST00000578630 GRIK4Q16099 956 aa12.95□□□□□ -0.34
ERBB2-208ENST00000578630 PRPF38BQ5VTL8 546 aaKnown RBP12.95□□□□□ -0.34
ERBB2-208ENST00000578630 DTHD1Q6ZMT9 781 aa12.95□□□□□ -0.34
ERBB2-208ENST00000578630 TRMT1LQ7Z2T5 733 aaKnown RBP12.95□□□□□ -0.34
ERBB2-208ENST00000578630 TMEM199Q8N511 208 aa12.95□□□□□ -0.34
ERBB2-208ENST00000578630 C4orf32Q8N8J7 132 aa12.95□□□□□ -0.34
ERBB2-208ENST00000578630 ERMNQ8TAM6 284 aa12.95□□□□□ -0.34
ERBB2-208ENST00000578630 CAGE1Q8TC20 777 aa12.95□□□□□ -0.34
ERBB2-208ENST00000578630 NEK9Q8TD19 979 aa12.95□□□□□ -0.34
ERBB2-208ENST00000578630 TBX21Q9UL17 535 aa12.95□□□□□ -0.34
ERBB2-208ENST00000578630 DDX11L8A8MPP1 907 aa12.94□□□□□ -0.34
ERBB2-208ENST00000578630 TREHO43280 583 aa12.94□□□□□ -0.34
ERBB2-208ENST00000578630 ATP4AP20648 1035 aa12.94□□□□□ -0.34
ERBB2-208ENST00000578630 HOXC8P31273 242 aa12.94□□□□□ -0.34
ERBB2-208ENST00000578630 PRPHP41219 470 aa12.94□□□□□ -0.34
ERBB2-208ENST00000578630 ZNF200P98182 395 aaPredicted RBP12.94□□□□□ -0.34
ERBB2-208ENST00000578630 XKR3Q5GH77 459 aa12.94□□□□□ -0.34
ERBB2-208ENST00000578630 MFSD5Q6N075 450 aa12.94□□□□□ -0.34
ERBB2-208ENST00000578630 TAF2Q6P1X5 1199 aa12.94□□□□□ -0.34
ERBB2-208ENST00000578630 OTUD6AQ7L8S5 288 aa12.94□□□□□ -0.34
ERBB2-208ENST00000578630 RSPH3Q86UC2 560 aa12.94□□□□□ -0.34
ERBB2-208ENST00000578630 TPH2Q8IWU9 490 aa12.94□□□□□ -0.34
ERBB2-208ENST00000578630 RPUSD2Q8IZ73 545 aaKnown RBP12.94□□□□□ -0.34
ERBB2-208ENST00000578630 LMBR1Q8WVP7 490 aa12.94□□□□□ -0.34
ERBB2-208ENST00000578630 BADQ92934 168 aa12.94□□□□□ -0.34
ERBB2-208ENST00000578630 EIF2AK1Q9BQI3 630 aaKnown RBP12.94□□□□□ -0.34
ERBB2-208ENST00000578630 PPP1R12CQ9BZL4 782 aa12.94□□□□□ -0.34
ERBB2-208ENST00000578630 ZSWIM4Q9H7M6 989 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms