RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 NEMFO60524 1076 aa17.15■□□□□ 0.34
LITAF-217ENST00000575426 MCM7P33993 719 aa17.15■□□□□ 0.34
LITAF-217ENST00000575426 MDM2Q00987 491 aaPredicted RBP17.15■□□□□ 0.34
LITAF-217ENST00000575426 BFSP2Q13515 415 aa17.15■□□□□ 0.34
LITAF-217ENST00000575426 TTC38Q5R3I4 469 aa17.15■□□□□ 0.34
LITAF-217ENST00000575426 PDXDC2PQ6P474 469 aa17.15■□□□□ 0.34
LITAF-217ENST00000575426 POTEDQ86YR6 584 aa17.15■□□□□ 0.34
LITAF-217ENST00000575426 CKAP2LQ8IYA6 745 aa17.15■□□□□ 0.34
LITAF-217ENST00000575426 RDM1Q8NG50 284 aa17.15■□□□□ 0.34
LITAF-217ENST00000575426 BADQ92934 168 aa17.15■□□□□ 0.34
LITAF-217ENST00000575426 ATP6V0A1Q93050 837 aa17.15■□□□□ 0.34
LITAF-217ENST00000575426 GJA10Q969M2 543 aa17.15■□□□□ 0.34
LITAF-217ENST00000575426 PCYT2Q99447 389 aa17.15■□□□□ 0.34
LITAF-217ENST00000575426 PPP1R12CQ9BZL4 782 aa17.15■□□□□ 0.34
LITAF-217ENST00000575426 UNC45AQ9H3U1 944 aa17.15■□□□□ 0.34
LITAF-217ENST00000575426 KCNMB3Q9NPA1 279 aa17.15■□□□□ 0.34
LITAF-217ENST00000575426 TBX21Q9UL17 535 aa17.15■□□□□ 0.34
LITAF-217ENST00000575426 TRPC6Q9Y210 931 aa17.15■□□□□ 0.34
LITAF-217ENST00000575426 EVPLQ92817 2033 aa17.14■□□□□ 0.34
LITAF-217ENST00000575426 IGKV6D-21A0A0A0MT36 114 aa17.14■□□□□ 0.33
LITAF-217ENST00000575426 VPS37CA5D8V6 355 aaPredicted RBP17.14■□□□□ 0.33
LITAF-217ENST00000575426 CYP2C9P11712 490 aa17.14■□□□□ 0.33
LITAF-217ENST00000575426 MAGEA10P43363 369 aaPredicted RBP17.14■□□□□ 0.33
LITAF-217ENST00000575426 ORC2Q13416 577 aaPredicted RBP17.14■□□□□ 0.33
LITAF-217ENST00000575426 ZNF174Q15697 407 aa17.14■□□□□ 0.33
LITAF-217ENST00000575426 TMEM199Q8N511 208 aa17.14■□□□□ 0.33
LITAF-217ENST00000575426 RETREG2Q8NC44 543 aa17.14■□□□□ 0.33
LITAF-217ENST00000575426 AFAP1L1Q8TED9 768 aa17.14■□□□□ 0.33
LITAF-217ENST00000575426 SETD4Q9NVD3 440 aa17.14■□□□□ 0.33
LITAF-217ENST00000575426 GABBR1Q9UBS5 961 aa17.14■□□□□ 0.33
LITAF-217ENST00000575426 PCDHA12Q9UN75 941 aa17.14■□□□□ 0.33
LITAF-217ENST00000575426 NRCAMQ92823 1304 aa17.14■□□□□ 0.33
LITAF-217ENST00000575426 POTEB3A0JP26 581 aa17.13■□□□□ 0.33
LITAF-217ENST00000575426 RRN3P2A6NIE6 340 aa17.13■□□□□ 0.33
LITAF-217ENST00000575426 PPFIA1Q13136 1202 aa17.13■□□□□ 0.33
LITAF-217ENST00000575426 PTK7Q13308 1070 aa17.13■□□□□ 0.33
LITAF-217ENST00000575426 POTEBQ6S5H4 581 aa17.13■□□□□ 0.33
LITAF-217ENST00000575426 CCDC60Q8IWA6 550 aaPredicted RBP17.13■□□□□ 0.33
LITAF-217ENST00000575426 HAS1Q92839 578 aa17.13■□□□□ 0.33
LITAF-217ENST00000575426 UBE2OQ9C0C9 1292 aaKnown RBP17.13■□□□□ 0.33
LITAF-217ENST00000575426 HBP1O60381 514 aa17.12■□□□□ 0.33
LITAF-217ENST00000575426 CYP2C18P33260 490 aa17.12■□□□□ 0.33
LITAF-217ENST00000575426 TXKP42681 527 aa17.12■□□□□ 0.33
LITAF-217ENST00000575426 ZNF200P98182 395 aaPredicted RBP17.12■□□□□ 0.33
LITAF-217ENST00000575426 PPP2R5CQ13362 524 aa17.12■□□□□ 0.33
LITAF-217ENST00000575426 PLCB4Q15147 1175 aa17.12■□□□□ 0.33
LITAF-217ENST00000575426 RILPL1Q5EBL4 403 aa17.12■□□□□ 0.33
LITAF-217ENST00000575426 MFSD5Q6N075 450 aa17.12■□□□□ 0.33
LITAF-217ENST00000575426 CHRDL2Q6WN34 429 aa17.12■□□□□ 0.33
LITAF-217ENST00000575426 CAGE1Q8TC20 777 aa17.12■□□□□ 0.33
LITAF-217ENST00000575426 NOC4LQ9BVI4 516 aaKnown RBP17.12■□□□□ 0.33
LITAF-217ENST00000575426 NRBP2Q9NSY0 501 aa17.12■□□□□ 0.33
LITAF-217ENST00000575426 MAFBQ9Y5Q3 323 aaPredicted RBP17.12■□□□□ 0.33
LITAF-217ENST00000575426 WNT7AO00755 349 aa17.11■□□□□ 0.33
LITAF-217ENST00000575426 TREHO43280 583 aa17.11■□□□□ 0.33
LITAF-217ENST00000575426 DKC1O60832 514 aaKnown RBP eCLIP17.11■□□□□ 0.33
LITAF-217ENST00000575426 INSRRP14616 1297 aa17.11■□□□□ 0.33
LITAF-217ENST00000575426 SYT1P21579 422 aa17.11■□□□□ 0.33
LITAF-217ENST00000575426 CCL23P55773 120 aa17.11■□□□□ 0.33
LITAF-217ENST00000575426 IGBP1P78318 339 aa17.11■□□□□ 0.33
LITAF-217ENST00000575426 FPGSQ05932 587 aa17.11■□□□□ 0.33
LITAF-217ENST00000575426 PPIGQ13427 754 aaKnown RBP eCLIP17.11■□□□□ 0.33
LITAF-217ENST00000575426 GRIK4Q16099 956 aa17.11■□□□□ 0.33
LITAF-217ENST00000575426 NCAPH2Q6IBW4 605 aa17.11■□□□□ 0.33
LITAF-217ENST00000575426 TRMT1LQ7Z2T5 733 aaKnown RBP17.11■□□□□ 0.33
LITAF-217ENST00000575426 ATP8B4Q8TF62 1192 aa17.11■□□□□ 0.33
LITAF-217ENST00000575426 BBXQ8WY36 941 aaPredicted RBP17.11■□□□□ 0.33
LITAF-217ENST00000575426 FAM167AQ96KS9 214 aa17.11■□□□□ 0.33
LITAF-217ENST00000575426 GDF15Q99988 308 aa17.11■□□□□ 0.33
LITAF-217ENST00000575426 TTC12Q9H892 705 aaPredicted RBP17.11■□□□□ 0.33
LITAF-217ENST00000575426 SCN5AQ14524 2016 aa17.11■□□□□ 0.33
LITAF-217ENST00000575426 TANC1Q9C0D5 1861 aa17.1■□□□□ 0.33
LITAF-217ENST00000575426 PITPNM1O00562 1244 aa17.1■□□□□ 0.33
LITAF-217ENST00000575426 OR52Z1P0C646 297 aa17.1■□□□□ 0.33
LITAF-217ENST00000575426 PDIA4P13667 645 aaKnown RBP17.1■□□□□ 0.33
LITAF-217ENST00000575426 ITGB8P26012 769 aa17.1■□□□□ 0.33
LITAF-217ENST00000575426 BMP8BP34820 402 aa17.1■□□□□ 0.33
LITAF-217ENST00000575426 BECN1Q14457 450 aa17.1■□□□□ 0.33
LITAF-217ENST00000575426 ZNF484Q5JVG2 852 aa17.1■□□□□ 0.33
LITAF-217ENST00000575426 B3GNT9Q6UX72 402 aa17.1■□□□□ 0.33
LITAF-217ENST00000575426 BRAPQ7Z569 592 aa17.1■□□□□ 0.33
LITAF-217ENST00000575426 SERINC5Q86VE9 423 aa17.1■□□□□ 0.33
LITAF-217ENST00000575426 LMBR1Q8WVP7 490 aa17.1■□□□□ 0.33
LITAF-217ENST00000575426 MTMR9Q96QG7 549 aa17.1■□□□□ 0.33
LITAF-217ENST00000575426 VAV3Q9UKW4 847 aa17.1■□□□□ 0.33
LITAF-217ENST00000575426 P4HBP07237 508 aaKnown RBP17.09■□□□□ 0.33
LITAF-217ENST00000575426 HOXC8P31273 242 aa17.09■□□□□ 0.33
LITAF-217ENST00000575426 TOB1P50616 345 aaPredicted RBP17.09■□□□□ 0.33
LITAF-217ENST00000575426 PSMC5P62195 406 aa17.09■□□□□ 0.33
LITAF-217ENST00000575426 HIC1Q14526 733 aa17.09■□□□□ 0.33
LITAF-217ENST00000575426 EPHA7Q15375 998 aa17.09■□□□□ 0.33
LITAF-217ENST00000575426 TMEM266Q2M3C6 531 aa17.09■□□□□ 0.33
LITAF-217ENST00000575426 RSPH3Q86UC2 560 aa17.09■□□□□ 0.33
LITAF-217ENST00000575426 RPUSD2Q8IZ73 545 aaKnown RBP17.09■□□□□ 0.33
LITAF-217ENST00000575426 SPRYD3Q8NCJ5 442 aa17.09■□□□□ 0.33
LITAF-217ENST00000575426 TMEM60Q9H2L4 133 aa17.09■□□□□ 0.33
LITAF-217ENST00000575426 PCDH10Q9P2E7 1040 aa17.09■□□□□ 0.33
LITAF-217ENST00000575426 TUBE1Q9UJT0 475 aa17.09■□□□□ 0.33
LITAF-217ENST00000575426 CEP131Q9UPN4 1083 aa17.09■□□□□ 0.33
LITAF-217ENST00000575426 PCDHB6Q9Y5E3 794 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms