RNA–Protein interactions for RNA: ENST00000570606.5

SMG6-204, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-204ENST00000570606 IFIT1BQ5T764 474 aaKnown RBP7.55□□□□□ -1.2
SMG6-204ENST00000570606 GDF6Q6KF10 455 aaPredicted RBP7.55□□□□□ -1.2
SMG6-204ENST00000570606 LRRC8DQ7L1W4 858 aa7.55□□□□□ -1.2
SMG6-204ENST00000570606 CHD1LQ86WJ1 897 aa7.55□□□□□ -1.2
SMG6-204ENST00000570606 HERC6Q8IVU3 1022 aa7.55□□□□□ -1.2
SMG6-204ENST00000570606 SMC5Q8IY18 1101 aa7.55□□□□□ -1.2
SMG6-204ENST00000570606 RGS22Q8NE09 1264 aa7.55□□□□□ -1.2
SMG6-204ENST00000570606 AFAP1L1Q8TED9 768 aa7.55□□□□□ -1.2
SMG6-204ENST00000570606 ARNTL2Q8WYA1 636 aa7.55□□□□□ -1.2
SMG6-204ENST00000570606 VWCEQ96DN2 955 aa7.55□□□□□ -1.2
SMG6-204ENST00000570606 TAAR1Q96RJ0 339 aa7.55□□□□□ -1.2
SMG6-204ENST00000570606 IWS1Q96ST2 819 aa7.55□□□□□ -1.2
SMG6-204ENST00000570606 ALG1Q9BT22 464 aa7.55□□□□□ -1.2
SMG6-204ENST00000570606 DSCC1Q9BVC3 393 aa7.55□□□□□ -1.2
SMG6-204ENST00000570606 KATNAL1Q9BW62 490 aa7.55□□□□□ -1.2
SMG6-204ENST00000570606 KRT23Q9C075 422 aa7.55□□□□□ -1.2
SMG6-204ENST00000570606 MAF1Q9H063 256 aa7.55□□□□□ -1.2
SMG6-204ENST00000570606 CNNM2Q9H8M5 875 aa7.55□□□□□ -1.2
SMG6-204ENST00000570606 VAT1LQ9HCJ6 419 aa7.55□□□□□ -1.2
SMG6-204ENST00000570606 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.55□□□□□ -1.2
SMG6-204ENST00000570606 CTNNA3Q9UI47 895 aa7.55□□□□□ -1.2
SMG6-204ENST00000570606 EPOPA6NHQ4 379 aa7.54□□□□□ -1.2
SMG6-204ENST00000570606 RFXAPO00287 272 aa7.54□□□□□ -1.2
SMG6-204ENST00000570606 SORBS3O60504 671 aa7.54□□□□□ -1.2
SMG6-204ENST00000570606 DKK1O94907 266 aa7.54□□□□□ -1.2
SMG6-204ENST00000570606 MYCLP12524 364 aaPredicted RBP7.54□□□□□ -1.2
SMG6-204ENST00000570606 SELPP16109 830 aa7.54□□□□□ -1.2
SMG6-204ENST00000570606 VARSP26640 1264 aaKnown RBP7.54□□□□□ -1.2
SMG6-204ENST00000570606 WDR5P61964 334 aaKnown RBP7.54□□□□□ -1.2
SMG6-204ENST00000570606 TFF2Q03403 129 aa7.54□□□□□ -1.2
SMG6-204ENST00000570606 CCDC62Q6P9F0 684 aa7.54□□□□□ -1.2
SMG6-204ENST00000570606 TRIM50Q86XT4 487 aa7.54□□□□□ -1.2
SMG6-204ENST00000570606 ANKMY2Q8IV38 441 aa7.54□□□□□ -1.2
SMG6-204ENST00000570606 C7orf31Q8N865 590 aa7.54□□□□□ -1.2
SMG6-204ENST00000570606 PPTC7Q8NI37 304 aa7.54□□□□□ -1.2
SMG6-204ENST00000570606 PHOSPHO2Q8TCD6 241 aa7.54□□□□□ -1.2
SMG6-204ENST00000570606 TBC1D5Q92609 795 aa7.54□□□□□ -1.2
SMG6-204ENST00000570606 YTHDC1Q96MU7 727 aaKnown RBP7.54□□□□□ -1.2
SMG6-204ENST00000570606 AMNQ9BXJ7 453 aa7.54□□□□□ -1.2
SMG6-204ENST00000570606 OSBPL3Q9H4L5 887 aa7.54□□□□□ -1.2
SMG6-204ENST00000570606 PXMP2Q9NR77 195 aa7.54□□□□□ -1.2
SMG6-204ENST00000570606 COL20A1Q9P218 1284 aa7.54□□□□□ -1.2
SMG6-204ENST00000570606 MAP4K5Q9Y4K4 846 aa7.54□□□□□ -1.2
SMG6-204ENST00000570606 XIRP2A4UGR9 3374 aa7.54□□□□□ -1.2
SMG6-204ENST00000570606 NLRC5Q86WI3 1866 aa7.53□□□□□ -1.2
SMG6-204ENST00000570606 EIF3JO75822 258 aaKnown RBP7.53□□□□□ -1.2
SMG6-204ENST00000570606 PARNO95453 639 aaKnown RBP7.53□□□□□ -1.2
SMG6-204ENST00000570606 F2P00734 622 aa7.53□□□□□ -1.2
SMG6-204ENST00000570606 NR3C2P08235 984 aa7.53□□□□□ -1.2
SMG6-204ENST00000570606 NUCB1Q02818 461 aa7.53□□□□□ -1.2
SMG6-204ENST00000570606 TAP1Q03518 808 aa7.53□□□□□ -1.2
SMG6-204ENST00000570606 TRDNQ13061 729 aa7.53□□□□□ -1.2
SMG6-204ENST00000570606 KIAA0753Q2KHM9 967 aa7.53□□□□□ -1.2
SMG6-204ENST00000570606 OXLD1Q5BKU9 147 aa7.53□□□□□ -1.2
SMG6-204ENST00000570606 KRT40Q6A162 431 aa7.53□□□□□ -1.2
SMG6-204ENST00000570606 CNKSR3Q6P9H4 555 aa7.53□□□□□ -1.2
SMG6-204ENST00000570606 SESTD1Q86VW0 696 aa7.53□□□□□ -1.2
SMG6-204ENST00000570606 HOMER1Q86YM7 354 aa7.53□□□□□ -1.2
SMG6-204ENST00000570606 DHX37Q8IY37 1157 aaKnown RBP7.53□□□□□ -1.2
SMG6-204ENST00000570606 STAG2Q8N3U4 1231 aa7.53□□□□□ -1.2
SMG6-204ENST00000570606 GDPD5Q8WTR4 605 aa7.53□□□□□ -1.2
SMG6-204ENST00000570606 DHX38Q92620 1227 aaKnown RBP7.53□□□□□ -1.2
SMG6-204ENST00000570606 ANKS1AQ92625 1134 aa7.53□□□□□ -1.2
SMG6-204ENST00000570606 KAT2BQ92831 832 aa7.53□□□□□ -1.2
SMG6-204ENST00000570606 EMID1Q96A84 441 aaPredicted RBP7.53□□□□□ -1.2
SMG6-204ENST00000570606 NECAB3Q96P71 396 aaPredicted RBP7.53□□□□□ -1.2
SMG6-204ENST00000570606 KCTD15Q96SI1 283 aaPredicted RBP7.53□□□□□ -1.2
SMG6-204ENST00000570606 JMJD4Q9H9V9 463 aa7.53□□□□□ -1.2
SMG6-204ENST00000570606 ZSWIM5Q9P217 1185 aa7.53□□□□□ -1.2
SMG6-204ENST00000570606 HDAC6Q9UBN7 1215 aa7.53□□□□□ -1.2
SMG6-204ENST00000570606 GTF2IRD1Q9UHL9 959 aa7.53□□□□□ -1.2
SMG6-204ENST00000570606 KIAA1024Q9UPX6 916 aa7.53□□□□□ -1.2
SMG6-204ENST00000570606 MTCH2Q9Y6C9 303 aa7.53□□□□□ -1.2
SMG6-204ENST00000570606 ERICH2A1L162 156 aa7.52□□□□□ -1.21
SMG6-204ENST00000570606 KLRF2D3W0D1 207 aa7.52□□□□□ -1.21
SMG6-204ENST00000570606 ZBTB5O15062 677 aa7.52□□□□□ -1.21
SMG6-204ENST00000570606 EFCAB14O75071 495 aa7.52□□□□□ -1.21
SMG6-204ENST00000570606 ARHGEF15O94989 841 aa7.52□□□□□ -1.21
SMG6-204ENST00000570606 GGPS1O95749 300 aa7.52□□□□□ -1.21
SMG6-204ENST00000570606 CKBP12277 381 aa7.52□□□□□ -1.21
SMG6-204ENST00000570606 CCND2P30279 289 aa7.52□□□□□ -1.21
SMG6-204ENST00000570606 HOXA13P31271 388 aaPredicted RBP7.52□□□□□ -1.21
SMG6-204ENST00000570606 ATP1A2P50993 1020 aa7.52□□□□□ -1.21
SMG6-204ENST00000570606 HSD17B4P51659 736 aa7.52□□□□□ -1.21
SMG6-204ENST00000570606 KCNQ1P51787 676 aa7.52□□□□□ -1.21
SMG6-204ENST00000570606 DEFB103AP81534 67 aa7.52□□□□□ -1.21
SMG6-204ENST00000570606 RBL2Q08999 1139 aa7.52□□□□□ -1.21
SMG6-204ENST00000570606 GRB10Q13322 594 aa7.52□□□□□ -1.21
SMG6-204ENST00000570606 LAMC2Q13753 1193 aa7.52□□□□□ -1.21
SMG6-204ENST00000570606 PHLDB3Q6NSJ2 640 aa7.52□□□□□ -1.21
SMG6-204ENST00000570606 FAM117BQ6P1L5 589 aa7.52□□□□□ -1.21
SMG6-204ENST00000570606 TMCO2Q7Z6W1 182 aaPredicted RBP7.52□□□□□ -1.21
SMG6-204ENST00000570606 RALYLQ86SE5 291 aaKnown RBP7.52□□□□□ -1.21
SMG6-204ENST00000570606 SIX5Q8N196 739 aa7.52□□□□□ -1.21
SMG6-204ENST00000570606 FAM200AQ8TCP9 573 aa7.52□□□□□ -1.21
SMG6-204ENST00000570606 SPATA33Q96N06 139 aa7.52□□□□□ -1.21
SMG6-204ENST00000570606 CTAGE1Q96RT6 745 aa7.52□□□□□ -1.21
SMG6-204ENST00000570606 PDCD2LQ9BRP1 358 aa7.52□□□□□ -1.21
SMG6-204ENST00000570606 DNAAF2Q9NVR5 837 aaKnown RBP7.52□□□□□ -1.21
SMG6-204ENST00000570606 DDX41Q9UJV9 622 aaKnown RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms