RNA–Protein interactions for RNA: ENST00000569278.1

CHRFAM7A-206, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 3

Gene CHRFAM7A, Length 464 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-206ENST00000569278 POTEBQ6S5H4 581 aa12.89□□□□□ -0.35
CHRFAM7A-206ENST00000569278 METTL7BQ6UX53 244 aa12.89□□□□□ -0.35
CHRFAM7A-206ENST00000569278 TMEM192Q8IY95 271 aa12.89□□□□□ -0.35
CHRFAM7A-206ENST00000569278 CNNM2Q9H8M5 875 aa12.89□□□□□ -0.35
CHRFAM7A-206ENST00000569278 TTC3P53804 2025 aa12.89□□□□□ -0.35
CHRFAM7A-206ENST00000569278 PRR33A8MZF0 331 aa12.88□□□□□ -0.35
CHRFAM7A-206ENST00000569278 GCOM1H8Y6P7 765 aaPredicted RBP12.88□□□□□ -0.35
CHRFAM7A-206ENST00000569278 CAND2O75155 1236 aa12.88□□□□□ -0.35
CHRFAM7A-206ENST00000569278 POLR2MP0CAP2 368 aa12.88□□□□□ -0.35
CHRFAM7A-206ENST00000569278 CAMK1Q14012 370 aa12.88□□□□□ -0.35
CHRFAM7A-206ENST00000569278 CTC1Q2NKJ3 1217 aa12.88□□□□□ -0.35
CHRFAM7A-206ENST00000569278 TIGD5Q53EQ6 642 aa12.88□□□□□ -0.35
CHRFAM7A-206ENST00000569278 CYFIP1Q7L576 1253 aa12.88□□□□□ -0.35
CHRFAM7A-206ENST00000569278 SAMD3Q8N6K7 520 aa12.88□□□□□ -0.35
CHRFAM7A-206ENST00000569278 BANK1Q8NDB2 785 aa12.88□□□□□ -0.35
CHRFAM7A-206ENST00000569278 RUFY2Q8WXA3 655 aa12.88□□□□□ -0.35
CHRFAM7A-206ENST00000569278 SEPT8Q92599 483 aa12.88□□□□□ -0.35
CHRFAM7A-206ENST00000569278 ZBTB10Q96DT7 871 aa12.88□□□□□ -0.35
CHRFAM7A-206ENST00000569278 PABPC5Q96DU9 382 aaKnown RBP12.88□□□□□ -0.35
CHRFAM7A-206ENST00000569278 EHMT1Q9H9B1 1298 aa12.88□□□□□ -0.35
CHRFAM7A-206ENST00000569278 MLXIPQ9HAP2 919 aa12.88□□□□□ -0.35
CHRFAM7A-206ENST00000569278 TECTAO75443 2155 aa12.88□□□□□ -0.35
CHRFAM7A-206ENST00000569278 C5orf67F2Z3F1 127 aa12.87□□□□□ -0.35
CHRFAM7A-206ENST00000569278 MEIS2O14770 477 aa12.87□□□□□ -0.35
CHRFAM7A-206ENST00000569278 GRM6O15303 877 aa12.87□□□□□ -0.35
CHRFAM7A-206ENST00000569278 TBX10O75333 385 aa12.87□□□□□ -0.35
CHRFAM7A-206ENST00000569278 UPP2O95045 317 aa12.87□□□□□ -0.35
CHRFAM7A-206ENST00000569278 GTF2F1P35269 517 aaKnown RBP eCLIP12.87□□□□□ -0.35
CHRFAM7A-206ENST00000569278 ANAPC15P60006 121 aa12.87□□□□□ -0.35
CHRFAM7A-206ENST00000569278 GPM6BQ13491 265 aa12.87□□□□□ -0.35
CHRFAM7A-206ENST00000569278 CRIPAKQ8N1N5 446 aa12.87□□□□□ -0.35
CHRFAM7A-206ENST00000569278 YME1L1Q96TA2 773 aa12.87□□□□□ -0.35
CHRFAM7A-206ENST00000569278 IFIH1Q9BYX4 1025 aaKnown RBP12.87□□□□□ -0.35
CHRFAM7A-206ENST00000569278 RTEL1Q9NZ71 1219 aa12.87□□□□□ -0.35
CHRFAM7A-206ENST00000569278 CTNNA3Q9UI47 895 aa12.87□□□□□ -0.35
CHRFAM7A-206ENST00000569278 LOXHD1Q8IVV2 1947 aa12.87□□□□□ -0.35
CHRFAM7A-206ENST00000569278 CFAP54Q96N23 3096 aa12.87□□□□□ -0.35
CHRFAM7A-206ENST00000569278 PNMA6FA0A0J9YX94 578 aa12.86□□□□□ -0.35
CHRFAM7A-206ENST00000569278 FIBPO43427 364 aa12.86□□□□□ -0.35
CHRFAM7A-206ENST00000569278 ATP9AO75110 1047 aa12.86□□□□□ -0.35
CHRFAM7A-206ENST00000569278 GHRP10912 638 aa12.86□□□□□ -0.35
CHRFAM7A-206ENST00000569278 KCNA2P16389 499 aa12.86□□□□□ -0.35
CHRFAM7A-206ENST00000569278 HYAL1Q12794 435 aa12.86□□□□□ -0.35
CHRFAM7A-206ENST00000569278 LPIN1Q14693 890 aa12.86□□□□□ -0.35
CHRFAM7A-206ENST00000569278 RABEP1Q15276 862 aa12.86□□□□□ -0.35
CHRFAM7A-206ENST00000569278 MARCH8Q5T0T0 291 aa12.86□□□□□ -0.35
CHRFAM7A-206ENST00000569278 USP17L6PQ6QN14 398 aa12.86□□□□□ -0.35
CHRFAM7A-206ENST00000569278 RPAINQ86UA6 219 aa12.86□□□□□ -0.35
CHRFAM7A-206ENST00000569278 MB21D2Q8IYB1 491 aaPredicted RBP12.86□□□□□ -0.35
CHRFAM7A-206ENST00000569278 SAMD11Q96NU1 681 aa12.86□□□□□ -0.35
CHRFAM7A-206ENST00000569278 MYL10Q9BUA6 226 aa12.86□□□□□ -0.35
CHRFAM7A-206ENST00000569278 USP26Q9BXU7 913 aa12.86□□□□□ -0.35
CHRFAM7A-206ENST00000569278 NSUN3Q9H649 340 aaKnown RBP12.86□□□□□ -0.35
CHRFAM7A-206ENST00000569278 PLXNA4Q9HCM2 1894 aa12.86□□□□□ -0.35
CHRFAM7A-206ENST00000569278 ADGRA3Q8IWK6 1321 aa12.86□□□□□ -0.35
CHRFAM7A-206ENST00000569278 MBLAC1A4D2B0 266 aaPredicted RBP12.85□□□□□ -0.35
CHRFAM7A-206ENST00000569278 ITGB5P18084 799 aa12.85□□□□□ -0.35
CHRFAM7A-206ENST00000569278 MCM2P49736 904 aa12.85□□□□□ -0.35
CHRFAM7A-206ENST00000569278 ARHGAP4P98171 946 aa12.85□□□□□ -0.35
CHRFAM7A-206ENST00000569278 UTP14CQ5TAP6 766 aaKnown RBP12.85□□□□□ -0.35
CHRFAM7A-206ENST00000569278 PCNX4Q63HM2 1172 aa12.85□□□□□ -0.35
CHRFAM7A-206ENST00000569278 ZNF710Q8N1W2 664 aa12.85□□□□□ -0.35
CHRFAM7A-206ENST00000569278 IGDCC4Q8TDY8 1250 aa12.85□□□□□ -0.35
CHRFAM7A-206ENST00000569278 PIBF1Q8WXW3 757 aa12.85□□□□□ -0.35
CHRFAM7A-206ENST00000569278 CLP1Q92989 425 aaKnown RBP12.85□□□□□ -0.35
CHRFAM7A-206ENST00000569278 ZNF689Q96CS4 500 aaPredicted RBP12.85□□□□□ -0.35
CHRFAM7A-206ENST00000569278 IL17RAQ96F46 866 aa12.85□□□□□ -0.35
CHRFAM7A-206ENST00000569278 AGO3Q9H9G7 860 aaKnown RBP12.85□□□□□ -0.35
CHRFAM7A-206ENST00000569278 KAT6AQ92794 2004 aa12.84□□□□□ -0.35
CHRFAM7A-206ENST00000569278 VPS13AQ96RL7 3174 aa12.84□□□□□ -0.35
CHRFAM7A-206ENST00000569278 GSTTP1A0A1W2PQM5 241 aa12.84□□□□□ -0.35
CHRFAM7A-206ENST00000569278 E7EWF7 191 aa12.84□□□□□ -0.35
CHRFAM7A-206ENST00000569278 PIK3CDO00329 1044 aa12.84□□□□□ -0.35
CHRFAM7A-206ENST00000569278 NOP56O00567 594 aaKnown RBP12.84□□□□□ -0.35
CHRFAM7A-206ENST00000569278 IFIT3O14879 490 aaKnown RBP12.84□□□□□ -0.35
CHRFAM7A-206ENST00000569278 LINC01565O15544 149 aa12.84□□□□□ -0.35
CHRFAM7A-206ENST00000569278 STAM2O75886 525 aa12.84□□□□□ -0.35
CHRFAM7A-206ENST00000569278 PLEKHA8P1O95397 391 aa12.84□□□□□ -0.35
CHRFAM7A-206ENST00000569278 DNAJB1P25685 340 aa12.84□□□□□ -0.35
CHRFAM7A-206ENST00000569278 SSTR3P32745 418 aaPredicted RBP12.84□□□□□ -0.35
CHRFAM7A-206ENST00000569278 CTNNB1P35222 781 aa12.84□□□□□ -0.35
CHRFAM7A-206ENST00000569278 IRS1P35568 1242 aa12.84□□□□□ -0.35
CHRFAM7A-206ENST00000569278 SP4Q02446 784 aa12.84□□□□□ -0.35
CHRFAM7A-206ENST00000569278 CAMK2BQ13554 666 aa12.84□□□□□ -0.35
CHRFAM7A-206ENST00000569278 NEDD9Q14511 834 aa12.84□□□□□ -0.35
CHRFAM7A-206ENST00000569278 PTPROQ16827 1216 aa12.84□□□□□ -0.35
CHRFAM7A-206ENST00000569278 GNPTABQ3T906 1256 aa12.84□□□□□ -0.35
CHRFAM7A-206ENST00000569278 HSCBQ8IWL3 235 aa12.84□□□□□ -0.35
CHRFAM7A-206ENST00000569278 APBB2Q92870 758 aa12.84□□□□□ -0.35
CHRFAM7A-206ENST00000569278 PCYT2Q99447 389 aa12.84□□□□□ -0.35
CHRFAM7A-206ENST00000569278 SENP7Q9BQF6 1050 aa12.84□□□□□ -0.35
CHRFAM7A-206ENST00000569278 SPZ1Q9BXG8 430 aa12.84□□□□□ -0.35
CHRFAM7A-206ENST00000569278 LY9Q9HBG7 655 aa12.84□□□□□ -0.35
CHRFAM7A-206ENST00000569278 CLDND1Q9NY35 253 aa12.84□□□□□ -0.35
CHRFAM7A-206ENST00000569278 KMT2EQ8IZD2 1858 aa12.84□□□□□ -0.35
CHRFAM7A-206ENST00000569278 DCXO43602 365 aa12.83□□□□□ -0.36
CHRFAM7A-206ENST00000569278 CHMLP26374 656 aa12.83□□□□□ -0.36
CHRFAM7A-206ENST00000569278 TCF7P36402 384 aaPredicted RBP12.83□□□□□ -0.36
CHRFAM7A-206ENST00000569278 SMAD2Q15796 467 aaKnown RBP12.83□□□□□ -0.36
CHRFAM7A-206ENST00000569278 CLUL1Q15846 466 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms