RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 PITPNM2Q9BZ72 1349 aa18.47■□□□□ 0.55
CMTM3-213ENST00000566756 SBF1O95248 1867 aa18.47■□□□□ 0.55
CMTM3-213ENST00000566756 CYP3A7-CYP3A51PA0A087WV96 503 aa18.46■□□□□ 0.55
CMTM3-213ENST00000566756 A0A0U1RQG5 324 aaPredicted RBP18.46■□□□□ 0.55
CMTM3-213ENST00000566756 PPP1R11O60927 126 aaPredicted RBP18.46■□□□□ 0.55
CMTM3-213ENST00000566756 CYP3A7P24462 503 aa18.46■□□□□ 0.55
CMTM3-213ENST00000566756 PAFAH1B1P43034 410 aa18.46■□□□□ 0.55
CMTM3-213ENST00000566756 TNFAIP1Q13829 316 aa18.46■□□□□ 0.55
CMTM3-213ENST00000566756 SLFN13Q68D06 897 aa18.46■□□□□ 0.55
CMTM3-213ENST00000566756 TRIM59Q8IWR1 403 aa18.46■□□□□ 0.55
CMTM3-213ENST00000566756 GMCL1Q96IK5 515 aa18.46■□□□□ 0.55
CMTM3-213ENST00000566756 RNF216Q9NWF9 866 aaPredicted RBP18.46■□□□□ 0.55
CMTM3-213ENST00000566756 PCDHA2Q9Y5H9 948 aa18.46■□□□□ 0.55
CMTM3-213ENST00000566756 JAG1P78504 1218 aa18.46■□□□□ 0.55
CMTM3-213ENST00000566756 ECM1Q16610 540 aa18.46■□□□□ 0.55
CMTM3-213ENST00000566756 EDRF1Q3B7T1 1238 aa18.46■□□□□ 0.55
CMTM3-213ENST00000566756 CCDC40Q4G0X9 1142 aa18.46■□□□□ 0.55
CMTM3-213ENST00000566756 SFMBT2Q5VUG0 894 aa18.46■□□□□ 0.55
CMTM3-213ENST00000566756 EMBQ6PCB8 327 aa18.46■□□□□ 0.55
CMTM3-213ENST00000566756 TMEM39BQ9GZU3 492 aa18.46■□□□□ 0.55
CMTM3-213ENST00000566756 PSTPIP2Q9H939 334 aa18.46■□□□□ 0.55
CMTM3-213ENST00000566756 STK24Q9Y6E0 443 aa18.46■□□□□ 0.55
CMTM3-213ENST00000566756 MYH7BA7E2Y1 1941 aa18.45■□□□□ 0.54
CMTM3-213ENST00000566756 SHTN1A0MZ66 631 aa18.45■□□□□ 0.54
CMTM3-213ENST00000566756 FRMD3A2A2Y4 597 aa18.45■□□□□ 0.54
CMTM3-213ENST00000566756 F5H6K3 240 aa18.45■□□□□ 0.54
CMTM3-213ENST00000566756 TRAF5O00463 557 aa18.45■□□□□ 0.54
CMTM3-213ENST00000566756 SLC1A4P43007 532 aa18.45■□□□□ 0.54
CMTM3-213ENST00000566756 GMPSP49915 693 aaPredicted RBP18.45■□□□□ 0.54
CMTM3-213ENST00000566756 KLRC3Q07444 240 aa18.45■□□□□ 0.54
CMTM3-213ENST00000566756 NNTQ13423 1086 aa18.45■□□□□ 0.54
CMTM3-213ENST00000566756 CCDC181Q5TID7 509 aa18.45■□□□□ 0.54
CMTM3-213ENST00000566756 SMCR8Q8TEV9 937 aaPredicted RBP18.45■□□□□ 0.54
CMTM3-213ENST00000566756 KCNMB3Q9NPA1 279 aa18.45■□□□□ 0.54
CMTM3-213ENST00000566756 MARCH6O60337 910 aa18.44■□□□□ 0.54
CMTM3-213ENST00000566756 NOL4O94818 638 aa18.44■□□□□ 0.54
CMTM3-213ENST00000566756 MYBL2P10244 700 aa18.44■□□□□ 0.54
CMTM3-213ENST00000566756 EPHB4P54760 987 aa18.44■□□□□ 0.54
CMTM3-213ENST00000566756 IRX5P78411 483 aaPredicted RBP18.44■□□□□ 0.54
CMTM3-213ENST00000566756 UBE2SQ16763 222 aa18.44■□□□□ 0.54
CMTM3-213ENST00000566756 FAM83BQ5T0W9 1011 aa18.44■□□□□ 0.54
CMTM3-213ENST00000566756 TTBK2Q6IQ55 1244 aa18.44■□□□□ 0.54
CMTM3-213ENST00000566756 SLFN12Q8IYM2 578 aa18.44■□□□□ 0.54
CMTM3-213ENST00000566756 TLR10Q9BXR5 811 aa18.44■□□□□ 0.54
CMTM3-213ENST00000566756 TANGO6Q9C0B7 1094 aa18.44■□□□□ 0.54
CMTM3-213ENST00000566756 AIPL1Q9NZN9 384 aa18.44■□□□□ 0.54
CMTM3-213ENST00000566756 CNOT7Q9UIV1 285 aaKnown RBP18.44■□□□□ 0.54
CMTM3-213ENST00000566756 AGPSO00116 658 aa18.44■□□□□ 0.54
CMTM3-213ENST00000566756 LRRC41Q15345 812 aa18.44■□□□□ 0.54
CMTM3-213ENST00000566756 KLHDC7AQ5VTJ3 777 aa18.44■□□□□ 0.54
CMTM3-213ENST00000566756 KCTD1Q719H9 257 aa18.44■□□□□ 0.54
CMTM3-213ENST00000566756 MICALL2Q8IY33 904 aa18.44■□□□□ 0.54
CMTM3-213ENST00000566756 CAVIN3Q969G5 261 aa18.44■□□□□ 0.54
CMTM3-213ENST00000566756 KCTD10Q9H3F6 313 aa18.44■□□□□ 0.54
CMTM3-213ENST00000566756 ARHGEF10LQ9HCE6 1279 aa18.44■□□□□ 0.54
CMTM3-213ENST00000566756 ATP8B3O60423 1300 aa18.43■□□□□ 0.54
CMTM3-213ENST00000566756 GRID2IPA4D2P6 1211 aa18.43■□□□□ 0.54
CMTM3-213ENST00000566756 GOLGA6BA6NDN3 693 aa18.43■□□□□ 0.54
CMTM3-213ENST00000566756 BTNL10A8MVZ5 291 aa18.43■□□□□ 0.54
CMTM3-213ENST00000566756 SHOX2O60902 331 aaPredicted RBP18.43■□□□□ 0.54
CMTM3-213ENST00000566756 PLA2G4BP0C869 781 aa18.43■□□□□ 0.54
CMTM3-213ENST00000566756 GGCXP38435 758 aa18.43■□□□□ 0.54
CMTM3-213ENST00000566756 AP3B2Q13367 1082 aa18.43■□□□□ 0.54
CMTM3-213ENST00000566756 NAB2Q15742 525 aa18.43■□□□□ 0.54
CMTM3-213ENST00000566756 CFAP221Q4G0U5 840 aa18.43■□□□□ 0.54
CMTM3-213ENST00000566756 C10orf76Q5T2E6 689 aa18.43■□□□□ 0.54
CMTM3-213ENST00000566756 GLIS3Q8NEA6 775 aa18.43■□□□□ 0.54
CMTM3-213ENST00000566756 LRRC1Q9BTT6 524 aa18.43■□□□□ 0.54
CMTM3-213ENST00000566756 STIM2Q9P246 746 aa18.43■□□□□ 0.54
CMTM3-213ENST00000566756 ZBTB21Q9ULJ3 1066 aa18.43■□□□□ 0.54
CMTM3-213ENST00000566756 TMX2Q9Y320 296 aa18.43■□□□□ 0.54
CMTM3-213ENST00000566756 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.43■□□□□ 0.54
CMTM3-213ENST00000566756 TBX3O15119 743 aa18.42■□□□□ 0.54
CMTM3-213ENST00000566756 PHACTR2O75167 634 aa18.42■□□□□ 0.54
CMTM3-213ENST00000566756 CAP2P40123 477 aa18.42■□□□□ 0.54
CMTM3-213ENST00000566756 GFPT1Q06210 699 aaPredicted RBP18.42■□□□□ 0.54
CMTM3-213ENST00000566756 RASA3Q14644 834 aa18.42■□□□□ 0.54
CMTM3-213ENST00000566756 SLC18A3Q16572 532 aa18.42■□□□□ 0.54
CMTM3-213ENST00000566756 TDRD12Q587J7 1177 aaKnown RBP18.42■□□□□ 0.54
CMTM3-213ENST00000566756 ALS2CLQ60I27 953 aa18.42■□□□□ 0.54
CMTM3-213ENST00000566756 HAUS3Q68CZ6 603 aa18.42■□□□□ 0.54
CMTM3-213ENST00000566756 NFRKBQ6P4R8 1299 aa18.42■□□□□ 0.54
CMTM3-213ENST00000566756 SH3GL2Q99962 352 aa18.42■□□□□ 0.54
CMTM3-213ENST00000566756 SALL4Q9UJQ4 1053 aa18.42■□□□□ 0.54
CMTM3-213ENST00000566756 GJA3Q9Y6H8 435 aa18.42■□□□□ 0.54
CMTM3-213ENST00000566756 GOLGA8KD6RF30 607 aa18.42■□□□□ 0.54
CMTM3-213ENST00000566756 CES2O00748 559 aa18.42■□□□□ 0.54
CMTM3-213ENST00000566756 TLR2O60603 784 aa18.42■□□□□ 0.54
CMTM3-213ENST00000566756 NDUFB10O96000 172 aa18.42■□□□□ 0.54
CMTM3-213ENST00000566756 EPB41P11171 864 aaKnown RBP18.42■□□□□ 0.54
CMTM3-213ENST00000566756 CYP11B2P19099 503 aa18.42■□□□□ 0.54
CMTM3-213ENST00000566756 LMNB1P20700 586 aa18.42■□□□□ 0.54
CMTM3-213ENST00000566756 BTNL9Q6UXG8 535 aa18.42■□□□□ 0.54
CMTM3-213ENST00000566756 SRLQ86TD4 932 aa18.42■□□□□ 0.54
CMTM3-213ENST00000566756 KCTD17Q8N5Z5 321 aa18.42■□□□□ 0.54
CMTM3-213ENST00000566756 TEPSINQ96N21 525 aa18.42■□□□□ 0.54
CMTM3-213ENST00000566756 LSM14BQ9BX40 385 aaKnown RBP18.42■□□□□ 0.54
CMTM3-213ENST00000566756 PCDHGC5Q9Y5F6 944 aa18.42■□□□□ 0.54
CMTM3-213ENST00000566756 A0A1W2PRG0 241 aa18.41■□□□□ 0.54
CMTM3-213ENST00000566756 A6NNZ2 444 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms