RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 WWC2Q6AWC2 1192 aa13.65□□□□□ -0.22
UBR1-206ENST00000566493 PPP1R18Q6NYC8 613 aa13.65□□□□□ -0.22
UBR1-206ENST00000566493 RPAINQ86UA6 219 aa13.65□□□□□ -0.22
UBR1-206ENST00000566493 NECAB3Q96P71 396 aaPredicted RBP13.65□□□□□ -0.22
UBR1-206ENST00000566493 MXRA8Q9BRK3 442 aa13.65□□□□□ -0.22
UBR1-206ENST00000566493 GLT8D2Q9H1C3 349 aa13.65□□□□□ -0.22
UBR1-206ENST00000566493 AZI2Q9H6S1 392 aa13.65□□□□□ -0.22
UBR1-206ENST00000566493 JPH1Q9HDC5 661 aaPredicted RBP13.65□□□□□ -0.22
UBR1-206ENST00000566493 RIC8AQ9NPQ8 531 aa13.65□□□□□ -0.22
UBR1-206ENST00000566493 SLC9A2Q9UBY0 812 aa13.65□□□□□ -0.22
UBR1-206ENST00000566493 TUBE1Q9UJT0 475 aa13.65□□□□□ -0.22
UBR1-206ENST00000566493 NAP1L2Q9ULW6 460 aaPredicted RBP13.65□□□□□ -0.22
UBR1-206ENST00000566493 CNTNAP5Q8WYK1 1306 aa13.64□□□□□ -0.23
UBR1-206ENST00000566493 RRN3P2A6NIE6 340 aa13.64□□□□□ -0.23
UBR1-206ENST00000566493 GOLGA8AA7E2F4 631 aa13.64□□□□□ -0.23
UBR1-206ENST00000566493 GOLGA8BA8MQT2 603 aa13.64□□□□□ -0.23
UBR1-206ENST00000566493 hCG_1984214I3L0E3 225 aa13.64□□□□□ -0.23
UBR1-206ENST00000566493 CDC45O75419 566 aa13.64□□□□□ -0.23
UBR1-206ENST00000566493 CHRNA1P02708 482 aa13.64□□□□□ -0.23
UBR1-206ENST00000566493 RPLP2P05387 115 aaKnown RBP13.64□□□□□ -0.23
UBR1-206ENST00000566493 HMGB1P09429 215 aaKnown RBP13.64□□□□□ -0.23
UBR1-206ENST00000566493 GHRP10912 638 aa13.64□□□□□ -0.23
UBR1-206ENST00000566493 ZNF76P36508 570 aa13.64□□□□□ -0.23
UBR1-206ENST00000566493 ADCY7P51828 1080 aa13.64□□□□□ -0.23
UBR1-206ENST00000566493 IGBP1P78318 339 aa13.64□□□□□ -0.23
UBR1-206ENST00000566493 EXOSC10Q01780 885 aaKnown RBP13.64□□□□□ -0.23
UBR1-206ENST00000566493 EPC2Q52LR7 807 aa13.64□□□□□ -0.23
UBR1-206ENST00000566493 RUFY4Q6ZNE9 571 aa13.64□□□□□ -0.23
UBR1-206ENST00000566493 ZNF713Q8N859 430 aaPredicted RBP13.64□□□□□ -0.23
UBR1-206ENST00000566493 TCEANC2Q96MN5 208 aa13.64□□□□□ -0.23
UBR1-206ENST00000566493 OSBPL7Q9BZF2 842 aa13.64□□□□□ -0.23
UBR1-206ENST00000566493 KCNH7Q9NS40 1196 aa13.64□□□□□ -0.23
UBR1-206ENST00000566493 V9GY48 417 aaPredicted RBP13.64□□□□□ -0.23
UBR1-206ENST00000566493 XIRP2A4UGR9 3374 aa13.63□□□□□ -0.23
UBR1-206ENST00000566493 KLF18A0A0U1RQI7 1052 aa13.63□□□□□ -0.23
UBR1-206ENST00000566493 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.63□□□□□ -0.23
UBR1-206ENST00000566493 SMCO2A6NFE2 343 aa13.63□□□□□ -0.23
UBR1-206ENST00000566493 RBAK-RBAKDNI3L0D1 243 aa13.63□□□□□ -0.23
UBR1-206ENST00000566493 GPM6BQ13491 265 aa13.63□□□□□ -0.23
UBR1-206ENST00000566493 TSGA10IPQ3SY00 556 aa13.63□□□□□ -0.23
UBR1-206ENST00000566493 TMEM192Q8IY95 271 aa13.63□□□□□ -0.23
UBR1-206ENST00000566493 DNAJB3Q8WWF6 145 aa13.63□□□□□ -0.23
UBR1-206ENST00000566493 IL17RAQ96F46 866 aa13.63□□□□□ -0.23
UBR1-206ENST00000566493 BRPF3Q9ULD4 1205 aa13.63□□□□□ -0.23
UBR1-206ENST00000566493 TRPC6Q9Y210 931 aa13.63□□□□□ -0.23
UBR1-206ENST00000566493 TTC28Q96AY4 2481 aa13.63□□□□□ -0.23
UBR1-206ENST00000566493 CCDC196A0A1B0GTZ2 297 aa13.62□□□□□ -0.23
UBR1-206ENST00000566493 MBLAC1A4D2B0 266 aaPredicted RBP13.62□□□□□ -0.23
UBR1-206ENST00000566493 M0QZ92 97 aa13.62□□□□□ -0.23
UBR1-206ENST00000566493 STXBP3O00186 592 aa13.62□□□□□ -0.23
UBR1-206ENST00000566493 INSRRP14616 1297 aa13.62□□□□□ -0.23
UBR1-206ENST00000566493 COL9A1P20849 921 aa13.62□□□□□ -0.23
UBR1-206ENST00000566493 ACTR2P61160 394 aa13.62□□□□□ -0.23
UBR1-206ENST00000566493 MRPS6P82932 125 aaKnown RBP13.62□□□□□ -0.23
UBR1-206ENST00000566493 AP3B2Q13367 1082 aa13.62□□□□□ -0.23
UBR1-206ENST00000566493 LPIN1Q14693 890 aa13.62□□□□□ -0.23
UBR1-206ENST00000566493 CEP55Q53EZ4 464 aa13.62□□□□□ -0.23
UBR1-206ENST00000566493 IER5Q5VY09 327 aa13.62□□□□□ -0.23
UBR1-206ENST00000566493 SKAP1Q86WV1 359 aa13.62□□□□□ -0.23
UBR1-206ENST00000566493 FIBCD1Q8N539 461 aa13.62□□□□□ -0.23
UBR1-206ENST00000566493 MRPL38Q96DV4 380 aaKnown RBP13.62□□□□□ -0.23
UBR1-206ENST00000566493 PGBD1Q96JS3 809 aa13.62□□□□□ -0.23
UBR1-206ENST00000566493 ANO3Q9BYT9 981 aa13.62□□□□□ -0.23
UBR1-206ENST00000566493 FAM49AQ9H0Q0 323 aaPredicted RBP13.62□□□□□ -0.23
UBR1-206ENST00000566493 UBE2ZQ9H832 354 aaPredicted RBP13.62□□□□□ -0.23
UBR1-206ENST00000566493 BARHL2Q9NY43 387 aa13.62□□□□□ -0.23
UBR1-206ENST00000566493 CDY2AQ9Y6F7 541 aa13.62□□□□□ -0.23
UBR1-206ENST00000566493 NFASCO94856 1347 aa13.62□□□□□ -0.23
UBR1-206ENST00000566493 NLRC5Q86WI3 1866 aa13.61□□□□□ -0.23
UBR1-206ENST00000566493 H3BNC9 293 aa13.61□□□□□ -0.23
UBR1-206ENST00000566493 ARP10275 920 aa13.61□□□□□ -0.23
UBR1-206ENST00000566493 STAT5BP51692 787 aa13.61□□□□□ -0.23
UBR1-206ENST00000566493 RCAN1P53805 252 aa13.61□□□□□ -0.23
UBR1-206ENST00000566493 MGAT3Q09327 533 aa13.61□□□□□ -0.23
UBR1-206ENST00000566493 FUT2Q10981 343 aa13.61□□□□□ -0.23
UBR1-206ENST00000566493 ADCK5Q3MIX3 580 aa13.61□□□□□ -0.23
UBR1-206ENST00000566493 TIGD5Q53EQ6 642 aa13.61□□□□□ -0.23
UBR1-206ENST00000566493 MARCH8Q5T0T0 291 aa13.61□□□□□ -0.23
UBR1-206ENST00000566493 TYW1BQ6NUM6 668 aa13.61□□□□□ -0.23
UBR1-206ENST00000566493 TSHZ1Q6ZSZ6 1077 aa13.61□□□□□ -0.23
UBR1-206ENST00000566493 PLPPR4Q7Z2D5 763 aa13.61□□□□□ -0.23
UBR1-206ENST00000566493 CYP2W1Q8TAV3 490 aa13.61□□□□□ -0.23
UBR1-206ENST00000566493 C1QTNF1Q9BXJ1 281 aa13.61□□□□□ -0.23
UBR1-206ENST00000566493 AGO4Q9HCK5 861 aaKnown RBP13.61□□□□□ -0.23
UBR1-206ENST00000566493 RWDD3Q9Y3V2 267 aa13.61□□□□□ -0.23
UBR1-206ENST00000566493 MUC3AQ02505 3323 aa13.61□□□□□ -0.23
UBR1-206ENST00000566493 RALGAPA2Q2PPJ7 1873 aa13.61□□□□□ -0.23
UBR1-206ENST00000566493 COL4A6Q14031 1691 aa13.6□□□□□ -0.23
UBR1-206ENST00000566493 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.6□□□□□ -0.23
UBR1-206ENST00000566493 MEIS1O00470 390 aa13.6□□□□□ -0.23
UBR1-206ENST00000566493 ENPP3O14638 875 aa13.6□□□□□ -0.23
UBR1-206ENST00000566493 CTNNB1P35222 781 aa13.6□□□□□ -0.23
UBR1-206ENST00000566493 SREBF1P36956 1147 aa13.6□□□□□ -0.23
UBR1-206ENST00000566493 SLC26A2P50443 739 aa13.6□□□□□ -0.23
UBR1-206ENST00000566493 METAP2P50579 478 aaKnown RBP eCLIP13.6□□□□□ -0.23
UBR1-206ENST00000566493 PLCB4Q15147 1175 aa13.6□□□□□ -0.23
UBR1-206ENST00000566493 FBXO47Q5MNV8 452 aa13.6□□□□□ -0.23
UBR1-206ENST00000566493 BANK1Q8NDB2 785 aa13.6□□□□□ -0.23
UBR1-206ENST00000566493 CCDC12Q8WUD4 166 aaPredicted RBP13.6□□□□□ -0.23
UBR1-206ENST00000566493 PCYT2Q99447 389 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms