RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 FLOT1O75955 427 aa18.72■□□□□ 0.59
RAB40C-210ENST00000566290 SERPINC1P01008 464 aa18.72■□□□□ 0.59
RAB40C-210ENST00000566290 CASP1P29466 404 aa18.72■□□□□ 0.59
RAB40C-210ENST00000566290 DSG3P32926 999 aa18.72■□□□□ 0.59
RAB40C-210ENST00000566290 PPP2R5CQ13362 524 aa18.72■□□□□ 0.59
RAB40C-210ENST00000566290 TKFCQ3LXA3 575 aa18.72■□□□□ 0.59
RAB40C-210ENST00000566290 CCDC144BQ3MJ40 725 aa18.72■□□□□ 0.59
RAB40C-210ENST00000566290 SAMD1Q6SPF0 538 aaPredicted RBP18.72■□□□□ 0.59
RAB40C-210ENST00000566290 LRRC8AQ8IWT6 810 aa18.72■□□□□ 0.59
RAB40C-210ENST00000566290 CLEC4DQ8WXI8 215 aa18.72■□□□□ 0.59
RAB40C-210ENST00000566290 SLC5A5Q92911 643 aa18.72■□□□□ 0.59
RAB40C-210ENST00000566290 FAM161BQ96MY7 647 aa18.72■□□□□ 0.59
RAB40C-210ENST00000566290 EXOC1Q9NV70 894 aa18.72■□□□□ 0.59
RAB40C-210ENST00000566290 LIMA1Q9UHB6 759 aaKnown RBP18.72■□□□□ 0.59
RAB40C-210ENST00000566290 MSH4O15457 936 aa18.71■□□□□ 0.59
RAB40C-210ENST00000566290 ZBED4O75132 1171 aa18.71■□□□□ 0.59
RAB40C-210ENST00000566290 SNAP25P60880 206 aa18.71■□□□□ 0.59
RAB40C-210ENST00000566290 IRF5Q13568 498 aa18.71■□□□□ 0.59
RAB40C-210ENST00000566290 CEP55Q53EZ4 464 aa18.71■□□□□ 0.59
RAB40C-210ENST00000566290 CCDC174Q6PII3 467 aa18.71■□□□□ 0.59
RAB40C-210ENST00000566290 NEK9Q8TD19 979 aa18.71■□□□□ 0.59
RAB40C-210ENST00000566290 GTF3C2Q8WUA4 911 aaPredicted RBP18.71■□□□□ 0.59
RAB40C-210ENST00000566290 STAMQ92783 540 aa18.71■□□□□ 0.59
RAB40C-210ENST00000566290 RIT2Q99578 217 aa18.71■□□□□ 0.59
RAB40C-210ENST00000566290 WDR11Q9BZH6 1224 aa18.71■□□□□ 0.59
RAB40C-210ENST00000566290 THAP9Q9H5L6 903 aa18.71■□□□□ 0.59
RAB40C-210ENST00000566290 HOXC10Q9NYD6 342 aa18.71■□□□□ 0.59
RAB40C-210ENST00000566290 ITIH6Q6UXX5 1313 aa18.71■□□□□ 0.59
RAB40C-210ENST00000566290 FRMD3A2A2Y4 597 aa18.7■□□□□ 0.58
RAB40C-210ENST00000566290 MEIS1O00470 390 aa18.7■□□□□ 0.58
RAB40C-210ENST00000566290 OFD1O75665 1012 aa18.7■□□□□ 0.58
RAB40C-210ENST00000566290 CFBP00751 764 aa18.7■□□□□ 0.58
RAB40C-210ENST00000566290 EEF1GP26641 437 aaKnown RBP18.7■□□□□ 0.58
RAB40C-210ENST00000566290 CCT6AP40227 531 aaKnown RBP18.7■□□□□ 0.58
RAB40C-210ENST00000566290 PRCPP42785 496 aa18.7■□□□□ 0.58
RAB40C-210ENST00000566290 ASIC1P78348 528 aa18.7■□□□□ 0.58
RAB40C-210ENST00000566290 PRR16Q569H4 304 aa18.7■□□□□ 0.58
RAB40C-210ENST00000566290 B3GNT9Q6UX72 402 aa18.7■□□□□ 0.58
RAB40C-210ENST00000566290 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.7■□□□□ 0.58
RAB40C-210ENST00000566290 GPR142Q7Z601 462 aa18.7■□□□□ 0.58
RAB40C-210ENST00000566290 GUF1Q8N442 669 aaKnown RBP18.7■□□□□ 0.58
RAB40C-210ENST00000566290 CCDC112Q8NEF3 446 aa18.7■□□□□ 0.58
RAB40C-210ENST00000566290 REPS2Q8NFH8 660 aa18.7■□□□□ 0.58
RAB40C-210ENST00000566290 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.7■□□□□ 0.581e-10■■■■■ 39.4
RAB40C-210ENST00000566290 TUFT1Q9NNX1 390 aa18.7■□□□□ 0.58
RAB40C-210ENST00000566290 VWA5AO00534 786 aa18.69■□□□□ 0.58
RAB40C-210ENST00000566290 NRDCO43847 1150 aa18.69■□□□□ 0.58
RAB40C-210ENST00000566290 PSMD10O75832 226 aa18.69■□□□□ 0.58
RAB40C-210ENST00000566290 CCNE1P24864 410 aa18.69■□□□□ 0.58
RAB40C-210ENST00000566290 MAPK4P31152 587 aa18.69■□□□□ 0.58
RAB40C-210ENST00000566290 HOXA13P31271 388 aaPredicted RBP18.69■□□□□ 0.58
RAB40C-210ENST00000566290 TRIM32Q13049 653 aa18.69■□□□□ 0.58
RAB40C-210ENST00000566290 TBX2Q13207 712 aaPredicted RBP18.69■□□□□ 0.58
RAB40C-210ENST00000566290 NR1I3Q14994 352 aa18.69■□□□□ 0.58
RAB40C-210ENST00000566290 PCNX4Q63HM2 1172 aa18.69■□□□□ 0.58
RAB40C-210ENST00000566290 TTI2Q6NXR4 508 aa18.69■□□□□ 0.58
RAB40C-210ENST00000566290 TRMT44Q8IYL2 757 aaKnown RBP18.69■□□□□ 0.58
RAB40C-210ENST00000566290 ANKLE1Q8NAG6 615 aa18.69■□□□□ 0.58
RAB40C-210ENST00000566290 ANKRD20A12PQ8NF67 263 aa18.69■□□□□ 0.58
RAB40C-210ENST00000566290 CACTINQ8WUQ7 758 aaKnown RBP18.69■□□□□ 0.58
RAB40C-210ENST00000566290 NELFBQ8WX92 580 aa18.69■□□□□ 0.58
RAB40C-210ENST00000566290 USP6NLQ92738 828 aa18.69■□□□□ 0.58
RAB40C-210ENST00000566290 MOV10L1Q9BXT6 1211 aaKnown RBP18.69■□□□□ 0.58
RAB40C-210ENST00000566290 BMP2KQ9NSY1 1161 aaPredicted RBP18.69■□□□□ 0.58
RAB40C-210ENST00000566290 INTS13Q9NVM9 706 aa18.69■□□□□ 0.58
RAB40C-210ENST00000566290 ADD3Q9UEY8 706 aaKnown RBP18.69■□□□□ 0.58
RAB40C-210ENST00000566290 CTNND2Q9UQB3 1225 aa18.69■□□□□ 0.58
RAB40C-210ENST00000566290 EYSQ5T1H1 3165 aa18.69■□□□□ 0.58
RAB40C-210ENST00000566290 MYMKA6NI61 221 aa18.68■□□□□ 0.58
RAB40C-210ENST00000566290 CYP2B6P20813 491 aa18.68■□□□□ 0.58
RAB40C-210ENST00000566290 PBX1P40424 430 aa18.68■□□□□ 0.58
RAB40C-210ENST00000566290 PDE4DQ08499 809 aa18.68■□□□□ 0.58
RAB40C-210ENST00000566290 TMEM132BQ14DG7 1078 aa18.68■□□□□ 0.58
RAB40C-210ENST00000566290 FILIP1LQ4L180 1135 aa18.68■□□□□ 0.58
RAB40C-210ENST00000566290 MORN1Q5T089 497 aa18.68■□□□□ 0.58
RAB40C-210ENST00000566290 FAM109BQ6ICB4 259 aaPredicted RBP18.68■□□□□ 0.58
RAB40C-210ENST00000566290 PLEKHH3Q7Z736 793 aa18.68■□□□□ 0.58
RAB40C-210ENST00000566290 DNAJC19Q96DA6 116 aa18.68■□□□□ 0.58
RAB40C-210ENST00000566290 NUDT12Q9BQG2 462 aa18.68■□□□□ 0.58
RAB40C-210ENST00000566290 SPATC1LQ9H0A9 340 aa18.68■□□□□ 0.58
RAB40C-210ENST00000566290 C11orf49Q9H6J7 331 aa18.68■□□□□ 0.58
RAB40C-210ENST00000566290 SAMSN1Q9NSI8 373 aaKnown RBP18.68■□□□□ 0.58
RAB40C-210ENST00000566290 NRBP1Q9UHY1 535 aa18.68■□□□□ 0.58
RAB40C-210ENST00000566290 GDAQ9Y2T3 454 aa18.68■□□□□ 0.58
RAB40C-210ENST00000566290 COL9A1P20849 921 aa18.67■□□□□ 0.58
RAB40C-210ENST00000566290 CDK11BP21127 795 aaKnown RBP18.67■□□□□ 0.58
RAB40C-210ENST00000566290 SFPQP23246 707 aaKnown RBP eCLIP18.67■□□□□ 0.58
RAB40C-210ENST00000566290 ZNF76P36508 570 aa18.67■□□□□ 0.58
RAB40C-210ENST00000566290 TERF1P54274 439 aa18.67■□□□□ 0.58
RAB40C-210ENST00000566290 CCZ1BP86790 482 aa18.67■□□□□ 0.58
RAB40C-210ENST00000566290 CCZ1P86791 482 aaPredicted RBP18.67■□□□□ 0.58
RAB40C-210ENST00000566290 LRRC63Q05C16 580 aa18.67■□□□□ 0.58
RAB40C-210ENST00000566290 MCM6Q14566 821 aa18.67■□□□□ 0.58
RAB40C-210ENST00000566290 SPECC1LQ69YQ0 1117 aa18.67■□□□□ 0.58
RAB40C-210ENST00000566290 CENPPQ6IPU0 288 aa18.67■□□□□ 0.58
RAB40C-210ENST00000566290 TMC6Q7Z403 805 aa18.67■□□□□ 0.58
RAB40C-210ENST00000566290 FAM114A1Q8IWE2 563 aa18.67■□□□□ 0.58
RAB40C-210ENST00000566290 P2RX5Q93086 422 aa18.67■□□□□ 0.58
RAB40C-210ENST00000566290 AGBL1Q96MI9 1066 aa18.67■□□□□ 0.58
RAB40C-210ENST00000566290 MXRA8Q9BRK3 442 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms