RNA–Protein interactions for RNA: ENST00000565636.5

CDH13-207, Transcript of cadherin 13, humanhuman

TSL 5 BASIC

Gene CDH13, Length 810 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-207ENST00000565636 DEPDC4Q8N2C3 294 aa9.82□□□□□ -0.84
CDH13-207ENST00000565636 RGS22Q8NE09 1264 aa9.82□□□□□ -0.84
CDH13-207ENST00000565636 PHOSPHO2Q8TCD6 241 aa9.82□□□□□ -0.84
CDH13-207ENST00000565636 FGD4Q96M96 766 aa9.82□□□□□ -0.84
CDH13-207ENST00000565636 TTC14Q96N46 770 aa9.82□□□□□ -0.84
CDH13-207ENST00000565636 PBX4Q9BYU1 374 aa9.82□□□□□ -0.84
CDH13-207ENST00000565636 SLC28A3Q9HAS3 691 aa9.82□□□□□ -0.84
CDH13-207ENST00000565636 RAVER2Q9HCJ3 691 aaKnown RBP9.82□□□□□ -0.84
CDH13-207ENST00000565636 TCP11L1Q9NUJ3 509 aa9.82□□□□□ -0.84
CDH13-207ENST00000565636 RCAN3Q9UKA8 241 aa9.82□□□□□ -0.84
CDH13-207ENST00000565636 PCDHA11Q9Y5I1 949 aa9.82□□□□□ -0.84
CDH13-207ENST00000565636 MYH6P13533 1939 aa9.82□□□□□ -0.84
CDH13-207ENST00000565636 KIAA1217Q5T5P2 1943 aa9.82□□□□□ -0.84
CDH13-207ENST00000565636 CDH23Q9H251 3354 aa9.81□□□□□ -0.84
CDH13-207ENST00000565636 CHD9Q3L8U1 2897 aa9.81□□□□□ -0.84
CDH13-207ENST00000565636 TMEM232C9JQI7 657 aa9.81□□□□□ -0.84
CDH13-207ENST00000565636 EFSO43281 561 aa9.81□□□□□ -0.84
CDH13-207ENST00000565636 APPP05067 770 aa9.81□□□□□ -0.84
CDH13-207ENST00000565636 CSF2RAP15509 400 aa9.81□□□□□ -0.84
CDH13-207ENST00000565636 TXLNAP40222 546 aa9.81□□□□□ -0.84
CDH13-207ENST00000565636 TFAP4Q01664 338 aa9.81□□□□□ -0.84
CDH13-207ENST00000565636 FSCN1Q16658 493 aaKnown RBP9.81□□□□□ -0.84
CDH13-207ENST00000565636 DUSP28Q4G0W2 176 aa9.81□□□□□ -0.84
CDH13-207ENST00000565636 LRRC69Q6ZNQ3 347 aa9.81□□□□□ -0.84
CDH13-207ENST00000565636 ASB2Q96Q27 587 aa9.81□□□□□ -0.84
CDH13-207ENST00000565636 A1CFQ9NQ94 594 aaKnown RBP9.81□□□□□ -0.84
CDH13-207ENST00000565636 ZNF536O15090 1300 aa9.81□□□□□ -0.84
CDH13-207ENST00000565636 LCTP09848 1927 aa9.8□□□□□ -0.84
CDH13-207ENST00000565636 ELOA3CA0A087WX78 387 aaPredicted RBP9.8□□□□□ -0.84
CDH13-207ENST00000565636 ELOA3DA6NLF2 546 aaPredicted RBP9.8□□□□□ -0.84
CDH13-207ENST00000565636 ORC4O43929 436 aa9.8□□□□□ -0.84
CDH13-207ENST00000565636 ICAM1P05362 532 aa9.8□□□□□ -0.84
CDH13-207ENST00000565636 CPT1AP50416 773 aa9.8□□□□□ -0.84
CDH13-207ENST00000565636 PPARAQ07869 468 aa9.8□□□□□ -0.84
CDH13-207ENST00000565636 ELOA3BQ3SY89 546 aa9.8□□□□□ -0.84
CDH13-207ENST00000565636 ZMYM1Q5SVZ6 1142 aa9.8□□□□□ -0.84
CDH13-207ENST00000565636 TAPT1Q6NXT6 567 aa9.8□□□□□ -0.84
CDH13-207ENST00000565636 TLK2Q86UE8 772 aa9.8□□□□□ -0.84
CDH13-207ENST00000565636 PLEKHM2Q8IWE5 1019 aa9.8□□□□□ -0.84
CDH13-207ENST00000565636 DNERQ8NFT8 737 aa9.8□□□□□ -0.84
CDH13-207ENST00000565636 ELOA3Q8NG57 546 aa9.8□□□□□ -0.84
CDH13-207ENST00000565636 TPCN2Q8NHX9 752 aa9.8□□□□□ -0.84
CDH13-207ENST00000565636 DCAF4Q8WV16 495 aa9.8□□□□□ -0.84
CDH13-207ENST00000565636 NUP88Q99567 741 aaPredicted RBP9.8□□□□□ -0.84
CDH13-207ENST00000565636 NAPBQ9H115 298 aa9.8□□□□□ -0.84
CDH13-207ENST00000565636 HIPK3Q9H422 1215 aa9.8□□□□□ -0.84
CDH13-207ENST00000565636 RNF146Q9NTX7 359 aa9.8□□□□□ -0.84
CDH13-207ENST00000565636 CYP39A1Q9NYL5 469 aa9.8□□□□□ -0.84
CDH13-207ENST00000565636 THEGQ9P2T0 379 aa9.8□□□□□ -0.84
CDH13-207ENST00000565636 MYH7BA7E2Y1 1941 aa9.8□□□□□ -0.84
CDH13-207ENST00000565636 C1QTNF9BB2RNN3 333 aa9.79□□□□□ -0.84
CDH13-207ENST00000565636 SMIM22K7EJ46 135 aa9.79□□□□□ -0.84
CDH13-207ENST00000565636 EML1O00423 815 aa9.79□□□□□ -0.84
CDH13-207ENST00000565636 ACTN1P12814 892 aa9.79□□□□□ -0.84
CDH13-207ENST00000565636 PSMA6P60900 246 aaKnown RBP9.79□□□□□ -0.84
CDH13-207ENST00000565636 CCDC178Q5BJE1 867 aa9.79□□□□□ -0.84
CDH13-207ENST00000565636 NFRKBQ6P4R8 1299 aa9.79□□□□□ -0.84
CDH13-207ENST00000565636 NOC4LQ9BVI4 516 aaKnown RBP9.79□□□□□ -0.84
CDH13-207ENST00000565636 EPB41L4AQ9HCS5 686 aaPredicted RBP9.79□□□□□ -0.84
CDH13-207ENST00000565636 HELLSQ9NRZ9 838 aa9.79□□□□□ -0.84
CDH13-207ENST00000565636 LMCD1Q9NZU5 365 aa9.79□□□□□ -0.84
CDH13-207ENST00000565636 CXXC1Q9P0U4 656 aaPredicted RBP9.79□□□□□ -0.84
CDH13-207ENST00000565636 KLF15Q9UIH9 416 aa9.79□□□□□ -0.84
CDH13-207ENST00000565636 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.79□□□□□ -0.84
CDH13-207ENST00000565636 SLC4A7Q9Y6M7 1214 aa9.79□□□□□ -0.84
CDH13-207ENST00000565636 ZMYM6O95789 1325 aa9.79□□□□□ -0.84
CDH13-207ENST00000565636 RAD50Q92878 1312 aa9.79□□□□□ -0.84
CDH13-207ENST00000565636 LRRC37A2A6NM11 1700 aa9.79□□□□□ -0.84
CDH13-207ENST00000565636 MYADML2A6NDP7 307 aa9.78□□□□□ -0.84
CDH13-207ENST00000565636 TSPY2A6NKD2 308 aa9.78□□□□□ -0.84
CDH13-207ENST00000565636 DYNC1LI2O43237 492 aaPredicted RBP9.78□□□□□ -0.84
CDH13-207ENST00000565636 ADCY6O43306 1168 aa9.78□□□□□ -0.84
CDH13-207ENST00000565636 SIN3BO75182 1162 aa9.78□□□□□ -0.84
CDH13-207ENST00000565636 MCCP23508 829 aa9.78□□□□□ -0.84
CDH13-207ENST00000565636 EPHA4P54764 986 aa9.78□□□□□ -0.84
CDH13-207ENST00000565636 CNTN2Q02246 1040 aa9.78□□□□□ -0.84
CDH13-207ENST00000565636 AAMPQ13685 434 aa9.78□□□□□ -0.84
CDH13-207ENST00000565636 NOL8Q76FK4 1167 aaKnown RBP9.78□□□□□ -0.84
CDH13-207ENST00000565636 SYT9Q86SS6 491 aa9.78□□□□□ -0.84
CDH13-207ENST00000565636 SAMD3Q8N6K7 520 aa9.78□□□□□ -0.84
CDH13-207ENST00000565636 ZDHHC1Q8WTX9 485 aa9.78□□□□□ -0.84
CDH13-207ENST00000565636 ALDH8A1Q9H2A2 487 aaPredicted RBP9.78□□□□□ -0.84
CDH13-207ENST00000565636 RANBP17Q9H2T7 1088 aaKnown RBP9.78□□□□□ -0.84
CDH13-207ENST00000565636 COG5Q9UP83 839 aa9.78□□□□□ -0.84
CDH13-207ENST00000565636 ASTN1O14525 1302 aa9.78□□□□□ -0.84
CDH13-207ENST00000565636 GRIN2DO15399 1336 aa9.78□□□□□ -0.84
CDH13-207ENST00000565636 WDR19Q8NEZ3 1342 aa9.78□□□□□ -0.84
CDH13-207ENST00000565636 PRRC2BQ5JSZ5 2229 aaKnown RBP9.78□□□□□ -0.84
CDH13-207ENST00000565636 CHD7Q9P2D1 2997 aa9.78□□□□□ -0.84
CDH13-207ENST00000565636 KAT6AQ92794 2004 aa9.77□□□□□ -0.85
CDH13-207ENST00000565636 MUC3AQ02505 3323 aa9.77□□□□□ -0.85
CDH13-207ENST00000565636 PALM3A6NDB9 673 aaPredicted RBP9.77□□□□□ -0.85
CDH13-207ENST00000565636 A6NJR5 290 aa9.77□□□□□ -0.85
CDH13-207ENST00000565636 KIF28PB7ZC32 967 aa9.77□□□□□ -0.85
CDH13-207ENST00000565636 BAIAP3O94812 1187 aa9.77□□□□□ -0.85
CDH13-207ENST00000565636 SPATA31C1P0DKV0 1188 aa9.77□□□□□ -0.85
CDH13-207ENST00000565636 TOP1P11387 765 aaKnown RBP9.77□□□□□ -0.85
CDH13-207ENST00000565636 ALAS1P13196 640 aa9.77□□□□□ -0.85
CDH13-207ENST00000565636 CYP2C18P33260 490 aa9.77□□□□□ -0.85
CDH13-207ENST00000565636 BFSP2Q13515 415 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms