RNA–Protein interactions for RNA: ENST00000563510.5

FANCA-211, Transcript of FA complementation group A, humanhuman

TSL 5

Gene FANCA, Length 633 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-211ENST00000563510 PALM3A6NDB9 673 aaPredicted RBP12.36□□□□□ -0.43
FANCA-211ENST00000563510 RCCD1A6NED2 376 aa12.36□□□□□ -0.43
FANCA-211ENST00000563510 TREHO43280 583 aa12.36□□□□□ -0.43
FANCA-211ENST00000563510 NCK2O43639 380 aa12.36□□□□□ -0.43
FANCA-211ENST00000563510 MCM6Q14566 821 aa12.36□□□□□ -0.43
FANCA-211ENST00000563510 SEC23AQ15436 765 aa12.36□□□□□ -0.43
FANCA-211ENST00000563510 CSPP1Q1MSJ5 1256 aa12.36□□□□□ -0.43
FANCA-211ENST00000563510 METTL7BQ6UX53 244 aa12.36□□□□□ -0.43
FANCA-211ENST00000563510 FCHSD1Q86WN1 690 aa12.36□□□□□ -0.43
FANCA-211ENST00000563510 HOMER1Q86YM7 354 aa12.36□□□□□ -0.43
FANCA-211ENST00000563510 PLEKHM2Q8IWE5 1019 aa12.36□□□□□ -0.43
FANCA-211ENST00000563510 TMEM192Q8IY95 271 aa12.36□□□□□ -0.43
FANCA-211ENST00000563510 IFIH1Q9BYX4 1025 aaKnown RBP12.36□□□□□ -0.43
FANCA-211ENST00000563510 RNPEPQ9H4A4 650 aa12.36□□□□□ -0.43
FANCA-211ENST00000563510 RIOX1Q9H6W3 641 aa12.36□□□□□ -0.43
FANCA-211ENST00000563510 SCUBE2Q9NQ36 999 aa12.36□□□□□ -0.43
FANCA-211ENST00000563510 PRKAG3Q9UGI9 489 aa12.36□□□□□ -0.43
FANCA-211ENST00000563510 RWDD3Q9Y3V2 267 aa12.36□□□□□ -0.43
FANCA-211ENST00000563510 C5orf42Q9H799 3197 aa12.35□□□□□ -0.43
FANCA-211ENST00000563510 ERICH2A1L162 156 aa12.35□□□□□ -0.43
FANCA-211ENST00000563510 FIBPO43427 364 aa12.35□□□□□ -0.43
FANCA-211ENST00000563510 UPP2O95045 317 aa12.35□□□□□ -0.43
FANCA-211ENST00000563510 CTSHP09668 335 aa12.35□□□□□ -0.43
FANCA-211ENST00000563510 ICAM3P32942 547 aa12.35□□□□□ -0.43
FANCA-211ENST00000563510 GRM4Q14833 912 aa12.35□□□□□ -0.43
FANCA-211ENST00000563510 COL19A1Q14993 1142 aa12.35□□□□□ -0.43
FANCA-211ENST00000563510 B4GALNT3Q6L9W6 998 aa12.35□□□□□ -0.43
FANCA-211ENST00000563510 INPP4AQ96PE3 977 aaPredicted RBP12.35□□□□□ -0.43
FANCA-211ENST00000563510 ARID3AQ99856 593 aa12.35□□□□□ -0.43
FANCA-211ENST00000563510 LMAN2LQ9H0V9 348 aa12.35□□□□□ -0.43
FANCA-211ENST00000563510 SUPT16HQ9Y5B9 1047 aaKnown RBP12.35□□□□□ -0.43
FANCA-211ENST00000563510 TRIOO75962 3097 aa12.35□□□□□ -0.43
FANCA-211ENST00000563510 ZNF318Q5VUA4 2279 aa12.35□□□□□ -0.43
FANCA-211ENST00000563510 PLXNA4Q9HCM2 1894 aa12.34□□□□□ -0.43
FANCA-211ENST00000563510 PNMA6FA0A0J9YX94 578 aa12.34□□□□□ -0.43
FANCA-211ENST00000563510 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.34□□□□□ -0.43
FANCA-211ENST00000563510 H3BQ06 376 aaPredicted RBP12.34□□□□□ -0.43
FANCA-211ENST00000563510 DCXO43602 365 aa12.34□□□□□ -0.43
FANCA-211ENST00000563510 RB1P06400 928 aa12.34□□□□□ -0.43
FANCA-211ENST00000563510 CLK2P49760 499 aaKnown RBP12.34□□□□□ -0.43
FANCA-211ENST00000563510 NUCB1Q02818 461 aa12.34□□□□□ -0.43
FANCA-211ENST00000563510 SART3Q15020 963 aaKnown RBP12.34□□□□□ -0.43
FANCA-211ENST00000563510 TCEAL5Q5H9L2 206 aa12.34□□□□□ -0.43
FANCA-211ENST00000563510 FAM26DQ5JW98 314 aa12.34□□□□□ -0.43
FANCA-211ENST00000563510 XRRA1Q6P2D8 792 aa12.34□□□□□ -0.43
FANCA-211ENST00000563510 MAMSTRQ6ZN01 415 aa12.34□□□□□ -0.43
FANCA-211ENST00000563510 EP400NLQ6ZTU2 488 aa12.34□□□□□ -0.43
FANCA-211ENST00000563510 CYFIP1Q7L576 1253 aa12.34□□□□□ -0.43
FANCA-211ENST00000563510 FIBCD1Q8N539 461 aa12.34□□□□□ -0.43
FANCA-211ENST00000563510 GIMAP8Q8ND71 665 aaPredicted RBP12.34□□□□□ -0.43
FANCA-211ENST00000563510 GPKOWQ92917 476 aaPredicted RBP eCLIP12.34□□□□□ -0.43
FANCA-211ENST00000563510 PIGSQ96S52 555 aa12.34□□□□□ -0.43
FANCA-211ENST00000563510 POP1Q99575 1024 aaKnown RBP12.34□□□□□ -0.43
FANCA-211ENST00000563510 GPR20Q99678 358 aa12.34□□□□□ -0.43
FANCA-211ENST00000563510 C11orf84Q9BUA3 381 aaPredicted RBP12.34□□□□□ -0.43
FANCA-211ENST00000563510 KCNH6Q9H252 994 aa12.34□□□□□ -0.43
FANCA-211ENST00000563510 NRCAMQ92823 1304 aa12.34□□□□□ -0.43
FANCA-211ENST00000563510 SPATA31C2B4DYI2 1134 aa12.33□□□□□ -0.44
FANCA-211ENST00000563510 C5orf67F2Z3F1 127 aa12.33□□□□□ -0.44
FANCA-211ENST00000563510 CTNNB1P35222 781 aa12.33□□□□□ -0.44
FANCA-211ENST00000563510 MRPS9P82933 396 aaKnown RBP12.33□□□□□ -0.44
FANCA-211ENST00000563510 ARHGAP4P98171 946 aa12.33□□□□□ -0.44
FANCA-211ENST00000563510 TAF2Q6P1X5 1199 aa12.33□□□□□ -0.44
FANCA-211ENST00000563510 CYB5R4Q7L1T6 521 aa12.33□□□□□ -0.44
FANCA-211ENST00000563510 RALYLQ86SE5 291 aaKnown RBP12.33□□□□□ -0.44
FANCA-211ENST00000563510 RSPH3Q86UC2 560 aa12.33□□□□□ -0.44
FANCA-211ENST00000563510 LMBR1Q8WVP7 490 aa12.33□□□□□ -0.44
FANCA-211ENST00000563510 CUL5Q93034 780 aa12.33□□□□□ -0.44
FANCA-211ENST00000563510 IL17RAQ96F46 866 aa12.33□□□□□ -0.44
FANCA-211ENST00000563510 UIMC1Q96RL1 719 aa12.33□□□□□ -0.44
FANCA-211ENST00000563510 SENP7Q9BQF6 1050 aa12.33□□□□□ -0.44
FANCA-211ENST00000563510 UPF3BQ9BZI7 483 aaKnown RBP12.33□□□□□ -0.44
FANCA-211ENST00000563510 SETD4Q9NVD3 440 aa12.33□□□□□ -0.44
FANCA-211ENST00000563510 CLDND1Q9NY35 253 aa12.33□□□□□ -0.44
FANCA-211ENST00000563510 ADGRA3Q8IWK6 1321 aa12.33□□□□□ -0.44
FANCA-211ENST00000563510 FNDC1Q4ZHG4 1894 aaPredicted RBP12.32□□□□□ -0.44
FANCA-211ENST00000563510 PPP1R3GB7ZBB8 358 aa12.32□□□□□ -0.44
FANCA-211ENST00000563510 IFIT3O14879 490 aaKnown RBP12.32□□□□□ -0.44
FANCA-211ENST00000563510 RPLP2P05387 115 aaKnown RBP12.32□□□□□ -0.44
FANCA-211ENST00000563510 ADAM17P78536 824 aa12.32□□□□□ -0.44
FANCA-211ENST00000563510 ZP2Q05996 745 aa12.32□□□□□ -0.44
FANCA-211ENST00000563510 WTAPQ15007 396 aa12.32□□□□□ -0.44
FANCA-211ENST00000563510 PCNX4Q63HM2 1172 aa12.32□□□□□ -0.44
FANCA-211ENST00000563510 RPAINQ86UA6 219 aa12.32□□□□□ -0.44
FANCA-211ENST00000563510 NLRX1Q86UT6 975 aa12.32□□□□□ -0.44
FANCA-211ENST00000563510 TRIM50Q86XT4 487 aa12.32□□□□□ -0.44
FANCA-211ENST00000563510 ADHFE1Q8IWW8 467 aa12.32□□□□□ -0.44
FANCA-211ENST00000563510 MYH9P35579 1960 aaKnown RBP12.31□□□□□ -0.44
FANCA-211ENST00000563510 CYTH3O43739 400 aa12.31□□□□□ -0.44
FANCA-211ENST00000563510 TRAK2O60296 914 aa12.31□□□□□ -0.44
FANCA-211ENST00000563510 SEMA3FQ13275 785 aa12.31□□□□□ -0.44
FANCA-211ENST00000563510 SLC35G1Q2M3R5 365 aa12.31□□□□□ -0.44
FANCA-211ENST00000563510 UTP14CQ5TAP6 766 aaKnown RBP12.31□□□□□ -0.44
FANCA-211ENST00000563510 NUDT18Q6ZVK8 323 aa12.31□□□□□ -0.44
FANCA-211ENST00000563510 CATIPQ7Z7H3 387 aa12.31□□□□□ -0.44
FANCA-211ENST00000563510 SMARCC2Q8TAQ2 1214 aa12.31□□□□□ -0.44
FANCA-211ENST00000563510 RUFY2Q8WXA3 655 aa12.31□□□□□ -0.44
FANCA-211ENST00000563510 CLP1Q92989 425 aaKnown RBP12.31□□□□□ -0.44
FANCA-211ENST00000563510 PPP2R3CQ969Q6 453 aa12.31□□□□□ -0.44
FANCA-211ENST00000563510 CDHR1Q96JP9 859 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms