RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 TMTC2Q8N394 836 aa9.65□□□□□ -0.86
PALB2-202ENST00000561514 SMARCC2Q8TAQ2 1214 aa9.65□□□□□ -0.86
PALB2-202ENST00000561514 LINC01599Q8WXQ3 324 aa9.65□□□□□ -0.86
PALB2-202ENST00000561514 SEPT1Q8WYJ6 367 aa9.65□□□□□ -0.86
PALB2-202ENST00000561514 CUL5Q93034 780 aa9.65□□□□□ -0.86
PALB2-202ENST00000561514 IL17RAQ96F46 866 aa9.65□□□□□ -0.86
PALB2-202ENST00000561514 MYL10Q9BUA6 226 aa9.65□□□□□ -0.86
PALB2-202ENST00000561514 LSG1Q9H089 658 aaKnown RBP9.65□□□□□ -0.86
PALB2-202ENST00000561514 ERAP1Q9NZ08 941 aa9.65□□□□□ -0.86
PALB2-202ENST00000561514 PRKAG3Q9UGI9 489 aa9.65□□□□□ -0.86
PALB2-202ENST00000561514 SEC63Q9UGP8 760 aaKnown RBP9.65□□□□□ -0.86
PALB2-202ENST00000561514 TUBE1Q9UJT0 475 aa9.65□□□□□ -0.86
PALB2-202ENST00000561514 HCN4Q9Y3Q4 1203 aa9.65□□□□□ -0.86
PALB2-202ENST00000561514 RWDD3Q9Y3V2 267 aa9.65□□□□□ -0.86
PALB2-202ENST00000561514 POTEB3A0JP26 581 aa9.64□□□□□ -0.87
PALB2-202ENST00000561514 PRR33A8MZF0 331 aa9.64□□□□□ -0.87
PALB2-202ENST00000561514 PRC1O43663 620 aa9.64□□□□□ -0.87
PALB2-202ENST00000561514 CALM1P0DP23 149 aa9.64□□□□□ -0.87
PALB2-202ENST00000561514 CALM2P0DP24 149 aa9.64□□□□□ -0.87
PALB2-202ENST00000561514 CALM3P0DP25 149 aa9.64□□□□□ -0.87
PALB2-202ENST00000561514 GHRP10912 638 aa9.64□□□□□ -0.87
PALB2-202ENST00000561514 MCM5P33992 734 aa9.64□□□□□ -0.87
PALB2-202ENST00000561514 BMPR1AP36894 532 aa9.64□□□□□ -0.87
PALB2-202ENST00000561514 LTBRP36941 435 aa9.64□□□□□ -0.87
PALB2-202ENST00000561514 ZP2Q05996 745 aa9.64□□□□□ -0.87
PALB2-202ENST00000561514 GRIK4Q16099 956 aa9.64□□□□□ -0.87
PALB2-202ENST00000561514 UTP14CQ5TAP6 766 aaKnown RBP9.64□□□□□ -0.87
PALB2-202ENST00000561514 POTEBQ6S5H4 581 aa9.64□□□□□ -0.87
PALB2-202ENST00000561514 TSHZ1Q6ZSZ6 1077 aa9.64□□□□□ -0.87
PALB2-202ENST00000561514 FIBCD1Q8N539 461 aa9.64□□□□□ -0.87
PALB2-202ENST00000561514 PCYT2Q99447 389 aa9.64□□□□□ -0.87
PALB2-202ENST00000561514 C11orf84Q9BUA3 381 aaPredicted RBP9.64□□□□□ -0.87
PALB2-202ENST00000561514 PLVAPQ9BX97 442 aa9.64□□□□□ -0.87
PALB2-202ENST00000561514 PSTPIP2Q9H939 334 aa9.64□□□□□ -0.87
PALB2-202ENST00000561514 JADE2Q9NQC1 790 aa9.64□□□□□ -0.87
PALB2-202ENST00000561514 TCF20Q9UGU0 1960 aaKnown RBP9.64□□□□□ -0.87
PALB2-202ENST00000561514 BAZ2BQ9UIF8 2168 aaKnown RBP9.64□□□□□ -0.87
PALB2-202ENST00000561514 NFASCO94856 1347 aa9.63□□□□□ -0.87
PALB2-202ENST00000561514 KDM3AQ9Y4C1 1321 aa9.63□□□□□ -0.87
PALB2-202ENST00000561514 RRN3P2A6NIE6 340 aa9.63□□□□□ -0.87
PALB2-202ENST00000561514 ENPP3O14638 875 aa9.63□□□□□ -0.87
PALB2-202ENST00000561514 MMP1P03956 469 aa9.63□□□□□ -0.87
PALB2-202ENST00000561514 ANP32AP39687 249 aaKnown RBP9.63□□□□□ -0.87
PALB2-202ENST00000561514 FUT2Q10981 343 aa9.63□□□□□ -0.87
PALB2-202ENST00000561514 MTMR1Q13613 665 aa9.63□□□□□ -0.87
PALB2-202ENST00000561514 NECTIN1Q15223 517 aa9.63□□□□□ -0.87
PALB2-202ENST00000561514 SMAD2Q15796 467 aaKnown RBP9.63□□□□□ -0.87
PALB2-202ENST00000561514 PPP1R18Q6NYC8 613 aa9.63□□□□□ -0.87
PALB2-202ENST00000561514 CASC1Q6TDU7 716 aa9.63□□□□□ -0.87
PALB2-202ENST00000561514 RSPH3Q86UC2 560 aa9.63□□□□□ -0.87
PALB2-202ENST00000561514 P2RX5Q93086 422 aa9.63□□□□□ -0.87
PALB2-202ENST00000561514 SMARCAD1Q9H4L7 1026 aa9.63□□□□□ -0.87
PALB2-202ENST00000561514 MYO7AQ13402 2215 aa9.63□□□□□ -0.87
PALB2-202ENST00000561514 CNTNAP5Q8WYK1 1306 aa9.62□□□□□ -0.87
PALB2-202ENST00000561514 IGSF9BQ9UPX0 1349 aa9.62□□□□□ -0.87
PALB2-202ENST00000561514 CACNA1HO95180 2353 aa9.62□□□□□ -0.87
PALB2-202ENST00000561514 IGKV6D-21A0A0A0MT36 114 aa9.62□□□□□ -0.87
PALB2-202ENST00000561514 H3BQ06 376 aaPredicted RBP9.62□□□□□ -0.87
PALB2-202ENST00000561514 hCG_1984214I3L0E3 225 aa9.62□□□□□ -0.87
PALB2-202ENST00000561514 SLC27A2O14975 620 aa9.62□□□□□ -0.87
PALB2-202ENST00000561514 GRM6O15303 877 aa9.62□□□□□ -0.87
PALB2-202ENST00000561514 DGKIO75912 1065 aa9.62□□□□□ -0.87
PALB2-202ENST00000561514 UPP2O95045 317 aa9.62□□□□□ -0.87
PALB2-202ENST00000561514 ALADP13716 330 aa9.62□□□□□ -0.87
PALB2-202ENST00000561514 NCLP19338 710 aaKnown RBP9.62□□□□□ -0.87
PALB2-202ENST00000561514 CTNNB1P35222 781 aa9.62□□□□□ -0.87
PALB2-202ENST00000561514 MRPS6P82932 125 aaKnown RBP9.62□□□□□ -0.87
PALB2-202ENST00000561514 SP4Q02446 784 aa9.62□□□□□ -0.87
PALB2-202ENST00000561514 HYAL1Q12794 435 aa9.62□□□□□ -0.87
PALB2-202ENST00000561514 CAMK1Q14012 370 aa9.62□□□□□ -0.87
PALB2-202ENST00000561514 NAALADL2Q58DX5 795 aa9.62□□□□□ -0.87
PALB2-202ENST00000561514 TYW1BQ6NUM6 668 aa9.62□□□□□ -0.87
PALB2-202ENST00000561514 PLPPR4Q7Z2D5 763 aa9.62□□□□□ -0.87
PALB2-202ENST00000561514 ADHFE1Q8IWW8 467 aa9.62□□□□□ -0.87
PALB2-202ENST00000561514 CMTR2Q8IYT2 770 aaKnown RBP9.62□□□□□ -0.87
PALB2-202ENST00000561514 ZNF713Q8N859 430 aaPredicted RBP9.62□□□□□ -0.87
PALB2-202ENST00000561514 FANCBQ8NB91 859 aa9.62□□□□□ -0.87
PALB2-202ENST00000561514 DNAJB3Q8WWF6 145 aa9.62□□□□□ -0.87
PALB2-202ENST00000561514 PIBF1Q8WXW3 757 aa9.62□□□□□ -0.87
PALB2-202ENST00000561514 FTHL17Q9BXU8 183 aa9.62□□□□□ -0.87
PALB2-202ENST00000561514 AGO3Q9H9G7 860 aaKnown RBP9.62□□□□□ -0.87
PALB2-202ENST00000561514 JPH1Q9HDC5 661 aaPredicted RBP9.62□□□□□ -0.87
PALB2-202ENST00000561514 KCNH7Q9NS40 1196 aa9.62□□□□□ -0.87
PALB2-202ENST00000561514 PCDHA6Q9UN73 950 aa9.62□□□□□ -0.87
PALB2-202ENST00000561514 FAM50BQ9Y247 325 aa9.62□□□□□ -0.87
PALB2-202ENST00000561514 PCDHA8Q9Y5H6 950 aa9.62□□□□□ -0.87
PALB2-202ENST00000561514 CDY2AQ9Y6F7 541 aa9.62□□□□□ -0.87
PALB2-202ENST00000561514 MYH6P13533 1939 aa9.62□□□□□ -0.87
PALB2-202ENST00000561514 SMIM35A0A1B0GVV1 85 aa9.61□□□□□ -0.87
PALB2-202ENST00000561514 FAM86C2PA6NEL3 165 aa9.61□□□□□ -0.87
PALB2-202ENST00000561514 CCDC69A6NI79 296 aa9.61□□□□□ -0.87
PALB2-202ENST00000561514 SPDYE3A6NKU9 549 aa9.61□□□□□ -0.87
PALB2-202ENST00000561514 DCXO43602 365 aa9.61□□□□□ -0.87
PALB2-202ENST00000561514 ATG7O95352 703 aa9.61□□□□□ -0.87
PALB2-202ENST00000561514 EYA4O95677 639 aa9.61□□□□□ -0.87
PALB2-202ENST00000561514 FOSP01100 380 aaPredicted RBP9.61□□□□□ -0.87
PALB2-202ENST00000561514 INSRRP14616 1297 aa9.61□□□□□ -0.87
PALB2-202ENST00000561514 SLC26A2P50443 739 aa9.61□□□□□ -0.87
PALB2-202ENST00000561514 RCAN1P53805 252 aa9.61□□□□□ -0.87
PALB2-202ENST00000561514 ITGB3BPQ13352 177 aaPredicted RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms